Array 1 101160-104371 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELR010000014.1 Acinetobacter baumannii strain MRSN32944 MRSN32944_contig00014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 101160 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 101220 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 101280 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 101340 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 101400 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 101460 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 101520 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 101580 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 101640 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 101700 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 101760 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 101820 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 101880 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 101940 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 102000 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 102060 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 102120 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 102180 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 102240 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 102300 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 102360 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 102420 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 102480 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 102540 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 102600 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 102660 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 102720 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 102780 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 102840 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 102900 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 102960 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 103020 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 103080 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 103140 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 103200 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 103260 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 103320 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 103381 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 103441 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 103501 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 103561 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 103621 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 103681 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 103741 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 103801 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 103862 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 103922 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 103982 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 104042 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 104102 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 104162 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 104222 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 104282 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 104342 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //