Array 1 276-966 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTU010000019.1 Clostridium chauvoei strain BS106-02 contig00019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 276 30 100.0 36 .............................. TAATTGAAACTAGTATCACTGATTCTTTTTTTTCTT 342 30 100.0 36 .............................. AAAGGATTTCTTGTTCCGTATTTTTTAGATAAATTA 408 30 100.0 37 .............................. GGCACTTGGTAAAATATACCTTTTGCTTAAACTCTGC 475 30 100.0 35 .............................. TAAAATACCACTCTTCTATTAATCTTTGGCTTGTA 540 30 100.0 37 .............................. ATCTGCTTAGGATAGTCTTGTGTTTCTTCAAAGCTAG 607 30 100.0 36 .............................. ATTGATGGAATGGTTAATTGATTATAAGAGATTGAA 673 30 100.0 35 .............................. CTTATCCATCTGCCCATACCAGTTATACCATTCCA 738 30 96.7 36 .......................G...... ACATATTTAACTTTCAAAAGCAACTGATTGCAATTC 804 30 100.0 37 .............................. ATGGTAGGCAATATATTTGTTGGAACTTATACTAAAG 871 30 100.0 36 .............................. GATTTATAGTTTTGACTATGATGATGAGTATATATA 937 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CTACGCTAGCGGAGCTATCAATAATATTTGAAGATCAATTAAAAGATGAATTAGCTTAAAAGCTTGTACTTTTTATAAATTATATGCATACTATTAGATTTTTTTGAAATACTAAAAAAGGTAATAAAAAACATTATTAGTATTTCTTAAATATAAAAAAATATTACTGGAAATGAAAATTTCCAGTAATATTAAAATAATAAAAATGATAATTACACAGAATTATCTATTCTCTCAAATATCCTAACAATTAAGTATTATCTCTTATTCCCCTTG # Right flank : TACAAGGCAATTTGAGTACTTGAGTATACCCAATTTGATAGACACATAGAAAGTACGTATAATAATAATTAAGAAGGATGTGTTTATTAAATGGGAAACCAAAGAAGATTTACTAAAGAATATAAAGAAGAAATAATTAGGCTAGTAACAGAACAAGGTAAAAAGGTTTATGTTGGTGATATTACCTATATAAGTACTGAAGAAGGCTAGTTGTATTTAGCTACTGTAATTGACTTATTTGATAGACGTATTACAGGTTGGGCAATGGATTCTACTATGACTAGAAGACTAGTTATAGATGCCTTTAATACAGCTGTATTAAAGGATGTTGTTATGATAATGCTTGTGCAGAATTATTCTTCTTATCTTTAAAGAAGCACTTTCTTTATGGAAGAAAATTTAAAACGAGAGCGGAATCAAAACAAGCTATAGTTGAATATATTGAATTATTTTATAATGCAAAAAGATTACACTCTACCTTAGGGTATAAGTCACCAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 16884-17833 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTU010000042.1 Clostridium chauvoei strain BS106-02 contig00042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 16884 30 100.0 35 .............................. AGATAACAACTGGAGAATAAAACCTATAGAAGAAG 16949 30 100.0 37 .............................. CAGGAGTCGTTGTATTTGATGAAATACATGAATATGA 17016 30 100.0 36 .............................. AAAGGAGAAATATATAGAGTTGATAAAAAAATATTT 17082 30 100.0 36 .............................. ATTCTCCTAAAGATGATAAGAATGAATCTTTTAATG 17148 30 100.0 36 .............................. AGATAAGCTAGGTAGTGACCCTGCTGGAAAATTACA 17214 30 100.0 36 .............................. GCTGAATCTGGTGAGGACAATGTTGATATAACAATT 17280 30 100.0 36 .............................. TTTGTGCAATACTATAGATATAGCAAGTGCAAGTTC 17346 30 100.0 36 .............................. CATCTGACACTAATAAAATAGAACTAGAGATTTACA 17412 30 100.0 34 .............................. CCTTCTGATGATATAACATTTGCTATAAGTTGTG 17476 30 100.0 36 .............................. GTTAAAAATTTTCACCCACAAGGAACTTTTATACAA 17542 30 100.0 35 .............................. AGTGAAAAAGAAAAGGAAATTAGAAAGAAAATAAG 17607 30 100.0 35 .............................. AAGTCAGTTTATGTGTGGATTAATCCAAAAGCATT 17672 30 100.0 36 .............................. TGGACTTTCCTCCCAAGCTTATTATTTTTTAAAACA 17738 30 100.0 36 .............................. TTGTTAGCTTTCTGTATTTGCAAATCGCATATAATT 17804 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAAACCTTTTTACCATTTAACTTAAAGGATGGGATGTAAATTGAAAAAACAAATTAATTATAATTACGTATTTATATTTTATGATATAAAGGAAGAACGTGTAAATAAAGTATTTAAAGTATGTAAAAAATATTTATCACATTTTCAAAAATCAGTATTCAGAGGAGGAATAACTCCTTCAAAATTAATTTTATTGAAAAAAGATTTAAATAAAGTTATAGAAAAAGAAGAAGATTTTATATGTATTATTAAACTTTTAAATGGGGATGTTTTTGGAGAGGAAATAATAGGAGTTCAAGGGCAAACAACAGGAGAAAGTTTAATAATATAAAATTACCAACCTAATAATATAGGTTAGAGCTTTAAAATACTACGGTATAAGTTATTTTTGTATTTAACTTTTATTTATAATAAAAAGCTGGTAATATATTTATATAAACATTATAAAATGGGCGTTGCATAGATATATAGTTATAAAAGAACTCTCATTTTTCTAAG # Right flank : AAATTTGGAGGGATAATTTAAATGGGTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 33-1308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTU010000061.1 Clostridium chauvoei strain BS106-02 contig00061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 33 30 100.0 35 .............................. AAATTTGGAGGGATAATTTAAATGGGTATATTAAA 98 30 100.0 36 .............................. TTGTTAGCTTTCTGTATTTGCAAATCGCATATAATT 164 30 100.0 35 .............................. AAATTTGGAGGGATAATTTAAATGGGTATATTAAA 229 30 100.0 36 .............................. CTTTTAACATATCCCAATCCTTGATAACGAGAATAC 295 30 100.0 35 .............................. GATGCTTTGAAGAAGTTAAATGATGAAGAGAAGTT 360 30 100.0 36 .............................. TAGATTGAATGAGCATAAAAGCTTTTACTGTTTAAC 426 30 100.0 35 .............................. GTACAAGTGCAAGAATAAAGAATAGTGGAAAGGAA 491 30 100.0 36 .............................. TATATTATTTCAGCTAAATCTAACATTCCCGTATCA 557 30 100.0 37 .............................. GTAAGTAGGAGGATAAAGAGAGCTATAAAACATTTAA 624 30 100.0 35 .............................. ACAACTTACGAACTAGCTAACAAAATAAGCGGGGT 689 30 100.0 36 .............................. TTTGAAAGAGGTGTATTAATATGCCTATTTTTTTAT 755 30 100.0 35 .............................. GAGCAAGAAGAATATAGTACATCAAAAAATAATGA 820 30 100.0 36 .............................. TACTTAGGGTTTTCCTCATAACACCCGATATGGTAT 886 30 100.0 35 .............................. ATTCTTTGCTTTTATCTCTATATTTAACTATCTCT 951 30 100.0 36 .............................. CAGAAAGGCTAGGAATTCTAATAAAGAGTACGATGA 1017 30 100.0 36 .............................. ATTGTAAATCAAGTGAGACCTTTCCCAACACCGGCT 1083 30 100.0 34 .............................. AAAAGGAGCTGATGGGAATCAAGGACCAATTGGA 1147 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGGTAAAATGAA 1213 30 100.0 36 .............................. GGTAGAAAATAATGATGAAATAAAATATTGTTTTTA 1279 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 20 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TAGCTTTCTGTATTTGCAAATCGCATATAATTG # Right flank : ATCCGAGACAGTAGATAGTTTTGTGTAAAAACAAAACTATCTACTGTTTTTTGTATTAACAGTTGGAAGTTTTGGAATAATATACTATATAAATTAGGAGAAATTATTCTGACAAGAAAAATTGATACCAACTTTGATTACAATGAGGAAATTAAAAGATGCAAAACAATCGATGATGTAATGGGTAAAAACGGATTAATACAAAGATTAGTTAAAGATGTTCTTGAAAATATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //