Array 1 9395-12041 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFJK01000018.1 Campylobacter ureolyticus strain CIT007 Contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 9395 30 100.0 36 .............................. CAAAATTTTAAAACTAAACAAATTAATACAAATATT 9461 30 100.0 36 .............................. ATTTCGCTATTAATTCATTTCTTGGCTTATATTCTT 9527 30 100.0 35 .............................. CAAAAAATAGCGGATTCGCTTGAAACTTCGCAAAC 9592 30 100.0 34 .............................. CATTTACTGGAGTAGCCAAGCCTAAATTAATTAA 9656 30 100.0 39 .............................. TTTTTAGAAATCTAGTTTTATCGTTTTCATCAAAATCAC 9725 30 100.0 36 .............................. AAGAAATATGAGATTATAGATGAGGTTAAGTTTAAT 9791 30 100.0 36 .............................. TAAAAAGTGATGGTAGTTGTAGTGGCGATGAGTTTA 9857 30 100.0 39 .............................. GAGTTTAAAGCATCGTATAATATTTGTTCCATTTTTCCA 9926 30 100.0 34 .............................. GAATGCATGAAGTAACTCACAACGATCTAAACGA 9990 30 100.0 38 .............................. AAGCTAAATTTCCAAAAATATCTAGAATATAAGCTTGA 10058 30 100.0 36 .............................. ATAACGGTAGTTTAGGGAGTTTTCTCGCTAGTTTTC 10124 30 100.0 34 .............................. ATTGATGAAGCTGATAGGTGTGAGACTACAAAAG 10188 30 100.0 35 .............................. TAAATTAGATCCAAAACTAAAAGAATATCAAAACA 10253 30 100.0 35 .............................. CAAAAACATTACGCCCACATTTTGGACTTGATAGG 10318 30 100.0 35 .............................. AAATATATTTTAAAATCTAACAAAATCCTAAAATG 10383 30 100.0 33 .............................. ATATAAACACGCAAAATGCTATCAATATCACAA 10446 30 100.0 35 .............................. TCTATATTAAAATAATTAAAAAGTTTATATCCTTG 10511 30 100.0 34 .............................. GCATATAGAGATAATAGTAATGATATATGTATTA 10575 30 100.0 34 .............................. AGTTTTTTAAAGAGGCTACACAAGCAACATCTTA 10639 30 100.0 35 .............................. ATGCTTATAAACCCGAGCCTTTAAAAGAACCTGAA 10704 30 100.0 35 .............................. AATTATCCAAAGTCCATTTTCTAGTGGCAATTACC 10769 30 100.0 37 .............................. GCCCTTGCATAATCTTATGAGTGCTTCTTACTCGCTC 10836 30 100.0 35 .............................. GAAGTTCATCACGGTATTTAACTTCTACCGATTTG 10901 30 100.0 34 .............................. ATTTTTGCAGGTGAAATAAATAACGCATATACTA 10965 30 100.0 34 .............................. AATTTAAAATAAAATAATTATAAACTTCCCAACC 11029 30 100.0 35 .............................. TTTGAATTTTTATTAATTAAAAAGTCAAAATAAAA 11094 30 100.0 35 .............................. GCTGAAAATGAAGAGCTAAAGGCTGAGAATGAGAG 11159 30 100.0 34 .............................. GTATCAGCTGATTGTAAAAAGTCATTATAATCTA 11223 30 100.0 34 .............................. AAGAAGATGGCATTTTAAGGAAAATCGGCAAATT 11287 30 100.0 37 .............................. CTTCGATAGACCTACAAAAATTAGTCCAAAAATCAAA 11354 30 100.0 36 .............................. CAGTCAATGTTGGGATTAAAAGGGCTGTAAGATACG 11420 30 100.0 35 .............................. GTAAATTTCACTGAAATTAATACTGAAAGAATTAA 11485 30 100.0 36 .............................. TTAAGTTTTCCAACACTTTAATAGGCTTTTGCGTTG 11551 30 100.0 34 .............................. CAACAAAATTTTAGAGATAGACTAGCAAAATCAG 11615 30 100.0 36 .............................. AAGTTTGACAATCTCCACAACAAGGGGATAAAATAT 11681 30 100.0 36 .............................. TCTAAAACTTGATAATAAAGCTCTAAACAATCCATC 11747 30 100.0 37 .............................. GTCTTGGAGCTGATGAAGTAGAAGTAAAAGACATAAC 11814 30 100.0 35 .............................. ATGGTATAAGCGAAATGAAAGTACAATTAAGTAAG 11879 30 100.0 39 .............................. ACACTTCCTTTTTTGTTATATATTCCAACATTCAATAAA 11948 30 100.0 34 .............................. TTAATATACTAGATGGTAAAGGAATAGATGATAA 12012 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ======================================= ================== 41 30 99.9 35 GTATAAATTTGATCCTATGGATTTTGAAAC # Left flank : TAAATAAAAAAGAAATAACACCAAAAGATTTTAAAACAAATGCTGGACGGATTCGTTTTAGCAACGACGCGGTACAAAAAATAGAGTTAAATATGATAAAGTCTTTAACCTCTGTTGTAAGTCTTGGCAAACAAAACCTTACATATAGACAAATCATAAGGCGTGAGGCAAACAGGATAAAAAAGTGTATTTGTGAAAATTATCCTTACGAGGGCTTTGTGGGTGAGGTTTAAGCGGTTTGGTTGATTTATATATTGAAACAGCAATCCAAATTATAAGTTTGTGAGCTAGACTCAAAGGTTTGAGCTATTTGTATATTTTGTAAAAAATTCATTTTAATGCCTGCTTATTGAGAAGTTATTTTAAAGCAAAAATTAAGTTTTCTAAAACTTAGATATAGCTTTATTTCAAGTTTTTATTTTTGTAAATTCAGCGATTTTAAAGGAAAATAATTTATAATTTTAAAGCAACAATCGCTTTTATATGGAGGTTTGGTTGCT # Right flank : ACTCAATTTTGCTAGTTGTTGTGGCAGTAAATGTCGGCAAAGCAGTCTTAATTTTGGCTAATTTTGATTAAAAAACTAAAGCGTGGTATAGCCAATTAAGAACTATGTCCTGCAATTTTACTTTTAATGAGTTTGTGGATTATTATGAGATGTCAAAAGAGTTATCAAAGTTTAGGATTTAAGCTTGGTGTTTAGTGGTTTTGTTCTGGTTCATCTTGTTCTAGTTCATCATATATTGGTTCCTTGTGTTTTGGCTCTTTATATGGTCTATCAAAAAGTGAAAGAAAATTATAAACAGTTGCTAAGGCCCAAGCTATGAATACAAATATAATTGCAATAACAATAAGAGAAATTGATATAAGAACTAAAACCACAATTATATTATCAATCATAACCACTCCTTTGAAATATTATATCACAAAAAGGCAAAACACTGCAAAAGCAACTTTAACCTTTGGAATGGACTTAAGCGAGTTTAATACCACTTTTAATAAAATTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //