Array 1 35920-36930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOEO010000023.1 Prevotella copri strain MSK.21.64 NODE_23_length_58840_cov_381.392, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 35920 30 100.0 35 .............................. TACAACTGGGTGGCGATTAGGGGGCTCACACAAGT 35985 30 100.0 36 .............................. TACAACGGCTCACGATGTCGGGCGAGTATAAGCGGG 36051 30 100.0 35 .............................. TACAACCTCCGACTTCGAATTATGCCGCTTTATTA 36116 30 100.0 35 .............................. TACAACTACCCTCGCCCAGATGCAAGAGCGATTAA 36181 30 100.0 36 .............................. TACAACCCGCTCCCTTGGTGCTGCCTATTATCCACA 36247 30 100.0 36 .............................. TACAACTGCTTGGCAACGTATGCCACATATCCACTG 36313 30 100.0 35 .............................. TACAACACACACGAATTATTGTGTTTTGGTCTAAG 36378 30 96.7 36 ...........G.................. TACAACGCATCAGAATTATCAAGAATCTTGTTGAAG 36444 30 100.0 36 .............................. TACAACTTCCACTCTTACAATCGATTCCGTTTTTAT 36510 30 100.0 36 .............................. TACAACTCTTTCAAATGATGGTAAATCTCCTCTGTA 36576 30 100.0 35 .............................. TACAACATTAACAAATAAAGGGTTATTGCGAGGAC 36641 30 100.0 36 .............................. TACAACAGAATCCCCCACCTCTCGGGAGAGCCTAAT 36707 30 100.0 35 .............................. TACAACCTTGTAAGCATCGACCACCCATGAGAGGA 36772 30 100.0 35 .............................. TACAACAACATGGAAAAAGAAGTAATTCAAGTAGA 36837 30 100.0 34 .............................. TACAACAAAAAGGTCTTTTCAATATGGCGGTTGC 36901 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 16 30 99.8 35 GTTGTGGTTTGATGTAGGATTCAAAAGATA # Left flank : ATATTATTCTGGAGAAATTAAGAAACTTTCCTTACCTATTATGACATGACAGAAGATAGACTAAATGCGTATCATATAATGTGGTTATTTGTATTTTTCGATTTGCCTGTTACAACGAAAAAAGAGATGAAGGCAGCTTCTCTCTTCCGCAAGAACTTGGAGAAAGATGGTTTCTCCATGATGCAATTTTCTGTCTATATACGTCATTGTGCATCAAGGGAAAGGTTGGAAGTGCATATAAAACGGGTAAAATCTTTGCTTCCGGAGACAGGAAAAGTTAGCTTATTAAGTGTTACTGATAAGCAATATGGAGATATTTATAACTTCTGGGGTAAACCCAAAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGTGAACCTATTCAATTGGAATTTTTTTAGTACTTTTGCATAGAAAATTATATCCTACTCATCATTTCTTATTAGAAAAAGTGATTGTTATGTGCTGGAAATCAGTACTTTCAAATCTATAG # Right flank : ATACAACGCTGAAGGCATGATAGCCTATAGTGACAGTATCGGCGAATCTGTACCACTATTGCGCATGAATCGGTACCATTATAGCACTGTCGGTACCATCGTATCACTTGAATCGGTACCACTATAGCGCACCAATTGGTACCAAAAAATCGGGGCACCTGCCTTAACTTGTATTTATGCATAGATGTTAGAAGGTATGGTGTTCTGTTCTATGTTCCAATATTAACTCACTTGTTTGAGAGTTTTAGTTCGTTTAGAGTAAAATTATTGATCTGGTCGCAAATTGCGACTGGTTTAATAGCTTGAAGCTCTTTACGGCTCGTTCATATATATACACAGAACTTATATCCAACAACTCATCGCCCACCAGCTGATTTCCGCTTGCACAACAGATGCTGGACGAGCGCATATCAGCTGTTATGCAAGCGCACAACAGCTGTTGTGCGGCTGAAGATATAGGCTTCTCCGGCTTATAACATTAATTCTTCCGGCAACAAGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGATTCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //