Array 1 406088-405279 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFD01000001.1 Wohlfahrtiimonas sp. G9077 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 406087 28 85.7 32 A..AG..C.................... TCAGCAAAGATTTTACGGGCTATTTCGTCCTT 406027 28 100.0 32 ............................ TAATCTCTAGGTAGTTTCGTTTAAATTTGGCG 405967 28 100.0 32 ............................ ATCAAGCATGGTTGAGAATCGTAGACGCGTCT 405907 28 100.0 33 ............................ TCGGCTGGTCTCTGCAAGGTGATTGCAGAGGGT 405846 28 100.0 32 ............................ CAACGCATTGGCATTTCTGATTCGTCGTGCTT 405786 28 100.0 32 ............................ ATTACGATTGGAACGCTGATTTATTACGCAAA 405726 28 100.0 32 ............................ GGCCTAAAATATCAATTTGACTTGCTGCAAGT 405666 28 100.0 32 ............................ GGCCTAAAATATCAATTTGACTTGCTGCAAGT 405606 28 96.4 32 .............T.............. TGATGTTTGTCGATGCAGTGGACGGCTACCAC 405546 28 96.4 32 .............T.............. AACCCACATTGCAATTGACGCCGTAGACTTCA 405486 28 96.4 32 .............T.............. GAGAAGCGCGACGGGCAGCACTATCTCATTCA 405426 28 96.4 32 .............T.............. CTTCATTATCTTTGAGTATGCAGCGCCTATTT 405366 28 96.4 32 .............T.............. AAAGCACAACAAGACAAAGCTAACACATGATC 405306 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 97.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTATATTGTTGCTTGGCATTTTTTTTATAACGGATTGGCTCCAAATTTTATGGAATTCGTTATAGATATGCTCAAATGAATCATTGTTATTTGTGTTTTTAGGATTTATCTTCTCAATAACAACTAATTTTCTGAGTTCATTATGTTTTGTACGTGCTTCAGCTAAAGAGATGAGTGGATATTGTCCAATAATGAATGTATCTTCTTTACCTGTATCTGGGTTAACGTATCTATATTCAAAAATTTTTGTGCCTGATGGAGTAACTTTTAAGCATAGTCCATAGCCATCATATAGGCGATATAACTTGTTTTTAGGTTTTGCATTTGCAATTTGTGTATTGGTTAATGGTTTTGAAATTCTAGCCATTTTTATACCCTTTTGAATACCCTCTAAAATTAGTGATTTATACACATTGATAGAAATGTAAGGAAACAATGTTATATTAAGAATAACGGTATATCAATTGGTGAAAGTCGTTAGGAAACGAGCGGAAACGGGT # Right flank : AAATTGCAGAAAAATTGATAAATGTTATAGTTTGCACGATTAGATGAAAGATAAGCATAAAAATATAATGTGCTAATAATCGTCATAACGATATCAAATAACTTAACGTATGAATACTAAGGAGAATATTATGCATATGCATTTGAATAATGAAGATCTCGATGGCTTAATTGCTGAGATTACAGCATCACAAGAATGGACAAGAATGGCGACGCACACCATTGGTCAGCAATATGATAAATCTGCACTCAATGACATTACCAAAAGCGTTAAAATGATCATCGGTCATTTTTTAAAAAGTGTTGGTACCACGTTTGTGTGTGTTGAGAATTCATTCATTACGTCATTGCCCGTTTTTGTCGATGCCAATAGCAATACAGGCGGTAGCACACAATGGAACAATTCTGTGAACATTAAGATGTCCATCGATATGTACGATAATGGCGTGATGGACATCGGGGTAAATGCAGAAATTGAAAATAAAAATGAAATCTCAGACA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 459843-457595 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFD01000001.1 Wohlfahrtiimonas sp. G9077 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 459842 28 100.0 32 ............................ TGAAAAATATCCTCATTTCTATTATCATCTGC 459782 28 100.0 32 ............................ TCTCTCGTTAGCTCAACTGTGTGAGTTAATTT 459722 28 100.0 32 ............................ GCTTGAGCCTGTAGTCTTGGATCATCTTCTGA 459662 28 100.0 32 ............................ ACATTGGTGATCATCCGTATCTATCAAAATTT 459602 28 100.0 32 ............................ AAGTGGCAGTTGCTGGCATTGATGTGATGACA 459542 28 100.0 32 ............................ AGCGTATGAAATAGCTAATAATTCATGAACGA 459482 28 100.0 32 ............................ TCGCCGTACTTCTTGATCTCCTCATTGATTGC 459422 28 100.0 32 ............................ ACAAAGCAATAAAGAACCCAATGCAAAGCGTA 459362 28 100.0 32 ............................ ATGCATTAGCCTCTCTTTTTGTGTCAAAAGTT 459302 28 100.0 32 ............................ TGCGTATAGCGTTCTGCCTTTAACGCAGTTGA 459242 28 100.0 32 ............................ TGCTGACTGAATCACTCAAAAACGCTGGTAAA 459182 28 100.0 32 ............................ ATCTTTGCGGACTAAAAATAATTGCCCATCAA 459122 28 100.0 32 ............................ GATTACGCCTGCCTTCAAGCCGCGCGTTACTT 459062 28 100.0 32 ............................ CGTCTGCAATGAACTCATGACGTTGCTCTGAA 459002 28 100.0 32 ............................ GAGCATCTTCGAGAATTGAGGGAGGAATATGA 458942 28 100.0 32 ............................ ATTGAATATCATACACCTAGTGAGATGCGCAA 458882 28 100.0 32 ............................ GCCGAGGTCAGAAACTTTAAAAACAATAAATC 458822 28 100.0 32 ............................ AACCGTCTTGAGCATACCAATCCGCCTCACCC 458762 28 100.0 32 ............................ GAATGCCAAAGTTGAGCGCACAGACGGGCAGC 458702 28 100.0 32 ............................ GTAGAAGGATGGGTAATGATGGAAGGAAAAAA 458642 28 100.0 32 ............................ TGCTTGTACTCCGCTATGCGTATGACCCGAGC 458582 28 100.0 32 ............................ AATCAGCAATCCTTTGTTAATATCAAACTCTT 458522 28 100.0 32 ............................ TGCGACTGCTTGCATCATCGCGCCTGTATCGA 458462 28 100.0 32 ............................ AATAAGAGAAACGCTAAGTAAAGCCCATGTCA 458402 28 100.0 32 ............................ TATTACGCCAGTCGCGCGTAAAGTCGAATTAG 458342 28 100.0 32 ............................ ACCCAATGCAGCCATTCCAAGCACAACGCTAC 458282 28 100.0 32 ............................ GTTGGGTACTAAATAATGTTTGCATGTTCAAA 458222 28 100.0 32 ............................ TCTTCGGCGTGTTGGATGGTTGCAGCGAATAT 458162 28 100.0 32 ............................ ACCTTTAAATATTCAATATGACGAATCGACGG 458102 28 100.0 32 ............................ ACAAAAACGCGCGCCGTATCCATAGCGATTCG 458042 28 100.0 32 ............................ TAAACCAAAATCCAATTGAACGCGAACTTGTG 457982 28 100.0 32 ............................ AATGGAATGATTCAGCTCAAAAATTTAGGTGT 457922 28 100.0 32 ............................ TTTGGTGGCAATCGTTTCAACCAAACCCGTGG 457862 28 100.0 32 ............................ ACCCAATGCAGCCATTCCAAGCACAACGCTAC 457802 28 100.0 32 ............................ GCGTGCGCGCATGATAGAGCTGACAAATCGCT 457742 28 100.0 32 ............................ GAACTCATGAACAGCTAGTAATTCAGCATTTG 457682 28 96.4 32 .............C.............. TGTTTTGACGCCGACATCTATTCCAATATTAA 457622 28 78.6 0 .............C...A..T..T.GT. | ========== ====== ====== ====== ============================ ================================ ================== 38 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATGAACATTGGATTGTGCTTGATGCGTTTGAGTGATTATGTGCACATTTCTGCCATTAAACCGGTGCCTAAAGATGTGAAAAGCTATGCTGTTTATCAGCGTCATCAGGTTAAAAGTAGCATTGAGCGTTTAGCGCGCCGTTATGCAAAGCGCAACAATGTGACTTTTGAGGATGCAGTTACACATTTTAAAGATAAACAGCCAAAGTACAGTGATTTGCCTTACGTGAAAATGAGCAGTGAAAGCACGGATCAACGTTTTAAATTGTTGATTCATAAGAATCCTGTTTCATCACCAACGGAGGCCGCTCATTTCACAACTTATGGTTTGAGTGCTGGAGATTCATTGTCCACCGTTCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAGCTTATTAAATAAGGAAAAATCATTGGTTGTTTTAGGCAAAATACCTTCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTATT # Right flank : TTAAATTAAGCTATTGATTTTTATCTAAAAAATAAGGGTATATTTTTAATATACCCTTATATGTACCTTTATTTCTGAGAATCAACCCATTTTTTTATATCAGACAATCTCCAGCGTGAAGATGTACCAAATTTTATTGGGGCAGGGAATCGCCCCTTTTGAATGGCTTCATAGATCCATTTCTTATTAAACCCTATGATATTTGATACATCTGAGATTCTTAAAAATCGGTCTGTCTCCAAAGGCTCATCTTCAGAATTTAATTGATAGATGATATTTTGTACCATTGCTTCAATGTTTTCAATTCTCTTTGAGGCATTTGGATCGAGTTGTACTTGAATCGTTGTCATATACTCTCCAATCAATAATTTTTAGGCAAACAGCTCAATTTGTGATTGTTTGAGCAATTTTTCTTGTTGTTCTTTAGCAGATATTTCTGCTAATCGTTTTGCTTGGTTACCACTTACAACATCAACAAGGTGAGCAAAGTTTACAGAGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 584349-583001 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFD01000001.1 Wohlfahrtiimonas sp. G9077 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 584348 28 100.0 32 ............................ TGCGGCATTGGCCCTACAAACTCAACAGAACC 584288 28 100.0 32 ............................ TTGCTGCGCATCGGGCATCGAGATGACTGTGC 584228 28 100.0 32 ............................ ACGGCGAGCTTGGATAGCTTGCTGACTTGGAC 584168 28 100.0 32 ............................ TTTGGCTGATCTCATACCGCTTAATTTCAATC 584108 28 100.0 32 ............................ AATTAACAAAGAGCTGATTTATGAGCTGAATA 584048 28 100.0 32 ............................ GTTTAGCTCGCTAAAATTCAATGACGCCATAT 583988 28 100.0 32 ............................ AATCGGTCCATACCAGATGGTCATTCAGCTTT 583928 28 100.0 32 ............................ TGATTTTTTAGCATAAAGCAAAGCCCGCATGT 583868 28 100.0 32 ............................ TTGAGCAACGACTGAGTCACCATGTGAAAAGT 583808 28 100.0 32 ............................ AATATGAATTTGCATTTTATTATTTAGCTATT 583748 28 100.0 32 ............................ GAGATCAGTATAAAGGCTCTCAACACCGTCTA 583688 28 100.0 32 ............................ TCTACATGGCCATCTTTTCCGTACTTATACGA 583628 28 100.0 32 ............................ ACCCATCAATGCAACGACTAGAGAAAACAACT 583568 28 100.0 32 ............................ TCACAAGTCAGCGAAGGAATTAACAGATGATG 583508 28 100.0 32 ............................ GCCGCTAAAATCATACGATTGATAAAGTCATT 583448 28 100.0 32 ............................ ATTAAATTCTTCATCCAACTTGTTATAAAACT 583388 28 100.0 32 ............................ TATCATATGATGCTTTTCGCGCTGCATCACGA 583328 28 100.0 32 ............................ TCATGTAATTAATTGAAATTGCGACACAATAA 583268 28 100.0 32 ............................ TCTTGGCGGTATATCTGATGGATTCGAGAAGT 583208 28 100.0 32 ............................ TCATGTTGATGTTGTGGCAGTGCTTCGAAAGA 583148 28 100.0 32 ............................ ATACTTGGCCAACAACATAGTCCGTTCCCTCA 583088 28 100.0 32 ............................ AGCGTGCTGTAAATACATACGCGCGACGTTGT 583028 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 23 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTAACAATGGGATTAGTGGTCATTTTAGTGGGTTGTGGATCAGTACAAGAAGATACAGTGATTCGTGAATTTACCGCTTATGGCACAAAGGCGCCGTGGCGCATTTTAGTGGATCATGACACATTATCGGTTGAAGGCAATTCGTCTGTGCTCAAAGCAGGGCAATTGAAGGTTGAGCGTTTAGCATATGCCAAAGGTGTTGAATTTTCAGGAGATTATTTTGGTAAACCCTTGACATTGAATGTTCGTTTTGCAGAGTGTAAAGATGCACAGGGTCAAGCTTCTGACTTTACGGCCACGTTGTATTATGGCAAAAATATCTATAAAGGTTGCGCAGTTGCGGGCTTAGTGCCGCATGCGAATACCTAAGACCTTTTTGGATTAATCTTTAAAAATTTTGATTAATATCAATTAATTAAATGCCATTGGAAAAAGATTGGTTTGGTGGCTAAAAACTACCAAAACCATGATCATTCCAATGGCTTTGCGATATTTTTAAT # Right flank : GACTGGAGCTATGCCATCGCAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCGCCATAATACGCCCAAAGCAGAACAGGTTTTTTCTTGGTCTGTAAAAGCTTATCCACTTTGCGCATGGTGTCATCATCCACAACCGGGCAACCTTGACTGAAGCCTAAAGGCAGATAATTGGGATATGTCTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATATAGCGCTTAAACGCATTGCTGTTGCTCGCCTCTAGCCCATGGAGTTTATAGTGAATGCCAATTCCCCATTTGCTCGGCGCACGGATGCCCACGCGATATTTACCAAGAGAAGATGCATAGCTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCGACGATGCTTTCAATCTCTGGCGATTGCGTGGTAAAGTTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //