Array 1 221968-226073 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIJE01000022.1 Desulfuribacillus alkaliarsenatis strain AHT28 DSM-24608_Contig_2_85X, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 221968 37 100.0 38 ..................................... GTAGATATATTAAATAAGCGTGTACCTTCGATAATTTC 222043 37 100.0 38 ..................................... CCATATTTAGATTTTTAATTAAATCGTTTGAGTCTGTT 222118 37 100.0 40 ..................................... AAGGCATGGTTATATGGGCTGATGATATGCAACCAAACAA 222195 37 100.0 35 ..................................... GCTTCCGGCAACACATGCTGCTGTGGTCGGTGTTC 222267 37 100.0 36 ..................................... TATTAAATTCTTTTTCTATCAACTCTTTCTTAAAAC 222340 37 100.0 38 ..................................... AATTTAGGGTCTTTTGTTGCGCCACTCAGTATTTTATT 222415 37 100.0 38 ..................................... TAATCCGATAATGAGTCTCTCTGAGGATGTGCCATTTC 222490 37 100.0 39 ..................................... TCAAATACCGTGTATATTGTATCCAAGGTATCCATGTAG 222566 37 100.0 35 ..................................... GAATTTCTCTCATCTTTATAAAAATATCTATCATT 222638 37 100.0 38 ..................................... TAAACCTACTGCTTCTTTAGTAACTTCGATATTTTGTA 222713 37 100.0 41 ..................................... ATGGAACCCAAGTCCTTTCCAAAGCGGTTACCGCAAACTAA 222791 37 100.0 40 ..................................... CGTATCTGTCTATACGTTGGATATCTCGCTCAATACCCAC 222868 37 100.0 34 ..................................... TGCGTAGCCTGTTCCGCTTACTTCTGTGCCTGTC 222939 37 100.0 38 ..................................... CATTGCAAGCATCTACCGTTTCTATCAACTGTTCCTGT 223014 37 100.0 37 ..................................... GTAATATTTATATTGCTAGTGTCATTTCTTTTTCGGT 223088 37 100.0 35 ..................................... TGAACACACCAAAATCAAGAACATGGGAAAACGCA 223160 37 100.0 36 ..................................... ACTCTAAAGCTTCGCTACGACTCGCGACAAAATTTC 223233 37 100.0 37 ..................................... TACCAAGCAGATAAACCTTAAATCCCATCGGACCAAA 223307 37 100.0 38 ..................................... TGTAAATGCTGACTTATACGTGATTTAAAAGAGTCTAG 223382 37 97.3 34 ..................T.................. CTTAATACTTTTCGCCATTCAGTAAGTTCTTCTC 223453 37 100.0 37 ..................................... CATAAGCAAATTATTCAAAATGGGGAAATGTTATGGT 223527 37 100.0 39 ..................................... AGGATACCTTGACACCTAGTTCGCCCTTTGTTTTGCTCT 223603 37 100.0 35 ..................................... GACATTGATGCGTGCTGCGTTATTTAGTCCGCTGC 223675 37 100.0 38 ..................................... AAAAAAACTTATGGGGGAAAACGAAGATAAGTTATTGC 223750 37 100.0 37 ..................................... ATTTTAAAAATCTAATTAAATCATCAATACTAGCGTC 223824 37 100.0 37 ..................................... TGCTCCCACTCCTTTGCTACTGCTTATAATCATACTC 223898 37 100.0 34 ..................................... AAATATTTAGCAGGGATATCTTTGTATTTAATAT 223969 37 100.0 37 ..................................... TCACACTATGCACTATAGCACTATATACGATTGCCTA 224043 37 100.0 36 ..................................... ACACTTAGCCAGTTCTTATTGAATATTCTTTTTGTC 224116 37 100.0 35 ..................................... TTTTTGAATGGTACCTGGTATTGTTTTAGTTCTTC 224188 37 100.0 34 ..................................... ATCTGCTGTAGAGCGCATGACATTCCAGTATGGT 224259 37 100.0 35 ..................................... CCTTTGTCCATCAAATCCCTGATATTAATGAATGT 224331 37 100.0 40 ..................................... TCCTGTTAGCACCATGGCTGCCATATCCCTGGTTTAATAT 224408 37 100.0 37 ..................................... TACCAAGCAGATAAACCTTAAATCCCATCGGACCAAA 224482 37 100.0 34 ..................................... TCCCTCACAACCACAACTAAAAGTTCCGTAGTAC 224553 37 100.0 35 ..................................... GCATTCAAGTAGATTCTAATGGTAACGTAGTAGGT 224625 37 100.0 38 ..................................... CGCTCCAAAGTGTCACATTTTTGAACGCTCCACGGGTC 224700 37 100.0 38 ..................................... TGTAAATGCTGACTTATACGTGATTTAAAAGAGTCTAG 224775 37 100.0 35 ..................................... TATTTTTTCGGCTGCCATCCTGTAAGCTCTGTCTT 224847 37 100.0 36 ..................................... ATATTTCCGCTATGTTCTAATGATGTATCTTTGAAA 224920 37 100.0 40 ..................................... CAGGCGATTGGGAAAGTCCTTCGCAGTCAGTTGAAAGCAC 224997 37 100.0 34 ..................................... CAATATACAGTGACTGTTTCGTTGCCGTTTTCGG 225068 37 100.0 40 ..................................... ACCACAACTAAACCTTTTATGCTTGACGCTTTTTTCCCTT 225145 37 100.0 39 ..................................... CCAGCAGTTTGCATATGATACCCTCCCGTGGTATGTTTT 225221 37 100.0 37 ..................................... TATATATCACCTCCGTTTTGTCTCTTATACTGCACCC 225295 37 100.0 35 ..................................... AATTCTGATTTACCTTGTTTTTTTGCTATTTCTAA 225367 37 89.2 39 A......T..G...............C.......... TAATGGTTTCTGTTGCTTCCTTATCATTTTGCGGCAGAT 225443 37 86.5 38 A..T...T..G...........G.............. TAACCTAAGTTGCTTCTGACGTTGTTTGAGCTTGTCCA 225518 37 97.3 34 ....................................T TTAGCGAATAGTCATCGTTAAAGATTTCCATTAG 225589 37 89.2 38 .C..A..T..............G.............. GCTGATATAATTCCTTCAGCCACTTCACTGCCTGCTTG 225664 37 94.6 41 ..........G...........G.............. TGTGCCGCCATATTCCAATGCTAGTTTAATAGTGTTTTCTA 225742 37 94.6 37 ..........G.........A................ AACATTTTAACTTCGTGCATTCGAGCAATTTTGCTAT 225816 37 91.9 37 .......A..G...........G.............. ACTTCTGATAAAGAAAGGTTATTCGCAGGTTGGTTTA 225890 37 86.5 37 .......A..G......C....G......G....... CTAACTACGTATGTTGGTATTTGCAACTTGTCAATTT 225964 37 91.9 35 ...................TT....T........... GACAACATCTGTAGCCTTCACATTCAATAGGAGTT 226036 37 86.5 0 ..........G......G.T..G........G..... | G [226058] ========== ====== ====== ====== ===================================== ========================================= ================== 56 37 98.3 37 GTAGTAAGAAACTAATTTCCGTTAAGGGAATTGAAAC # Left flank : CCATGGGCACATTCATACTATTAGTAGCCCTATTGAAGCCGTCGTCCTTATCTTACATCTCCAAGCATACAACGATGAGCAAAGGCAAAGCGATGGGCATTGCCGAGTCGTATATGAGCTTAGGAAGAATCATCGGACCACTATGGGCTGGAATGCTTTTAGACTTCAACGTGTTCTTACCGTTTATTAGCGGAGCACTGTTTTTCTTAGTGGTATTTATGGTAGTGATGGTTAAATCCAGAAATTGATATTTTTTGAAGGAGATTAAGATAGTATTATAGAATAAATAGATATAGGTTAGATGTTAGATATATAGAACTAAAAATCGAGAGCCTCAGGTGGCGGAAAATCCCACGAGCCTCTCGAACGTTATTTTCCTTTTGCTAGCAAGGGAATACATTGTTGTTGCGCATATTAAAATCATTAATATTCGCAATTCTCATAACCGCTCGATTTACCGCTAATAAAATGGCGTCCATCAAAGGGGGAAATAGTAAGCG # Right flank : CATCTTGCTGCGTAAAGAATAGTTTTATCGCTTTAGTATTAAAAAATCAAGTTATCAAGTATTGAAATTTAAAATCAAAACAACCTGTGTGTATGTTTAAGCGTACATGAAGGTTGTTTTTTGTAATATTAAGTAAAAAATTACTATATCGACAAATTACGACAAAATTCGAACGAGGAGATAGGTGAGTTTTGTAGAAGGTAGTCACAATAAGGTTTTATGAGGTATCACCACAAATCACCGTATTGATAAAATTATAAAAGGATAGTGATAACATGGACGAAGACAAAAACAATGCTTTTGAAAAAATCTATAAGAATTACAAGTATCTTAACAATATGATGGTTGAGGAAATGGAAATAGCTTCACTACATGGTGGGGTTACAGGGAATTATAGGGAAGAAATGTGGATTGAATTATTTCGAAGTATGATTCCTAAGAAATTTTCTATGGCACAAGGAGTAATGATTATCGATTCAATGGGTAAAGTATCCAAAGAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTAAGAAACTAATTTCCGTTAAGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-35] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 247896-249796 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIJE01000022.1 Desulfuribacillus alkaliarsenatis strain AHT28 DSM-24608_Contig_2_85X, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 247896 37 100.0 36 ..................................... ATTAAGTATACCCCTGCCATAGAATTATTTATTATT 247969 37 100.0 39 ..................................... TTATCCCTGCCTTTCAACCGTTTTGCATAACCAACTATC 248045 37 100.0 38 ..................................... TTTTATCCACTGGCTTATTCACCCTTTCTGTATTGCAC 248120 37 100.0 35 ..................................... GTTACCTTTACCATAAGACAAAGCACCATCAAAAT 248192 37 100.0 38 ..................................... TATTAGATAAAGCTGTACTTTTTCCTGATCCTGATTCC 248267 37 100.0 36 ..................................... TCGTCTTGTATTTTGTTGTATATTTCTGCTACTAAA 248340 37 100.0 43 ..................................... ACGAATCCAGTTGAGCAGCTTGTTAAGTATCTTGAAATATTGT 248420 37 100.0 35 ..................................... TTTGACGCTGACCAATGCCTGAGAAAAATGCACAT 248492 37 100.0 36 ..................................... GTCAAGAATGGTCTTTGGAATTCGTATAACTCATAG 248565 37 100.0 39 ..................................... GGATAGATTGACATCGCCAATGCAGCTACGCTTGCAAGC 248641 37 100.0 37 ..................................... AGCGGTAACTCGATACTATATGTACCATTACCTTTAA 248715 37 100.0 40 ..................................... GACCACTATGTAGCACTTGGATTTAAACATGCTAAAGCTA 248792 37 100.0 40 ..................................... CTACTAAGCTTCGCCTTGCTACGAAAAGCACTATAAACTG 248869 37 100.0 36 ..................................... AGATTGATGTCTTTTTCAAGCATCCCCCTCCCTGTT 248942 37 100.0 34 ..................................... AACACTCATGACAACCTCTCCTCTCTTTTTTTAC 249013 37 100.0 36 ..................................... AATGCAAGCTCTGCTACTTTTCCTTTTTGCCTTAAG 249086 37 100.0 40 ..................................... TTTAAGTTTTTTACTTTTTCCTCTAAGTTGCCAGGTATGT 249163 37 100.0 34 ..................................... GCCCAAGCGTCGATTTTCTTTGTTAATTCTTTAG 249234 37 100.0 38 ..................................... GCTCGACAGATGCCAATATTTAGTTCCTCGCAAATCAT 249309 37 100.0 36 ..................................... TCACACGCTATGATAAACTGATGACCTAATACATTC 249382 37 100.0 40 ..................................... ATCGTTTGCCCTGTATCACGTCCACCCAACATGCGAGGTA 249459 37 100.0 37 ..................................... ACATCAAGATTAAAGCAATTAAACCTATCTTTTTCAT 249533 37 100.0 35 ..................................... AATGCAGCCCCACCATGATAAAACTCGTCTATATT 249605 37 100.0 37 ..................................... CTTTATGATTGTAATGATGCCTGGATGGTAACGAATA 249679 37 97.3 39 .....G............................... TCGTCGAAGTGTCCTTTCGATAGACCTTTTGCTGTCATT 249755 37 94.6 0 ............................T......T. | AT,C,CT [249782,249789,249791] ========== ====== ====== ====== ===================================== =========================================== ================== 26 37 99.7 37 GTAGTAATAATCTAATTTCCGTGAAGGGAATTGAAAC # Left flank : ATTCGTGACGACAAACGTAGAACAAAGATTTTTAAAACACTAAAAGATTATGCAACACCAGTTCAATACAGTGTATTTGAAGGGATACTGACCAATGAAGATTATATTAATCTAAAATATAGGTTGAAACGTCTAATGAAAAAAGAAGATAGTATCATATTTTACTCTCAATGCGGCAGATGTAAAAGTGATTTGGAGAGATTAGGAACGAATGTGGTGGTATTTGGTGATATTGATCTCGTGTATTAATTATTTAACAGGAAATTTGCTGTTTATGTAGAATAAATAATATAAACATGTACAAACAAGTAACTTAGCACAAATCGAGAGGTCCAGGTGGCTAAAAATACTATAGGTCACTCGAGTAGATTTTCACCCTAGTATTACTGCATCTTTATAGGGTTAGGGCTGTTTCCTATAAGTTAAAAGCAGCTGCTTTTATTAGGGTCTCGAATAATATTAAGAAAACCCATTATCTATAAGGTCTTAATTTGGTTGCA # Right flank : CTAAAGTTGAGCTATTAGCAATTTCTGTTTGTGAACAACTTGTTATTAAAATTATTTAAGGAGAGATGAGCTATAGAAAAGAAAATCGTTTTTGCAGACGTAGACATGAGTTTGGATGGTTGTATGCTGGAGCTAACAGTAGTAAAGATAATCCGCTGGGGGACGGCGGGGAAAAACTTATTTGGTATGGAGACGATGTAAATACGGAGCAGATTCTGAAGAGCTCGGGAAAGTATAATATTAACGCTAGGATTCTCCATGAGTCAGATTTAGCCCATGGAGCTGTTATCATGGGTAGAAGGACTTTTGATATATCTATAGACCAATGGGGAGAAAATCCACCCATACATAAGCCTTGTTTTGTAATAACTAGTACCCCAACTAAAGCAATAATTAAAGATGGAGGGACGAGCTTCACTTTCGTTACTGGTGGTATTGAAGAAGCACTGATGCTAGCTAAAGAAGCGGCTGGTGAACGTGGCGTATGTGTTATGGGGGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTAATAATCTAATTTCCGTGAAGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //