Array 1 25218-21950 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHFM01000005.1 Streptococcus gallolyticus strain NCTC13767, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25217 36 100.0 30 .................................... AAATATGAGCTTGTGAGGGCTATTACCGCT 25151 36 100.0 30 .................................... AAAAGATGTTGTTTCTGTCCGAAAGGTTGC 25085 36 100.0 30 .................................... GTATTCTGCATATCGGTAAATAATGTGTCT 25019 36 100.0 30 .................................... GTAACTTATCTAGAAATGGTAAATAGTTAG 24953 36 100.0 30 .................................... CGTCTACTTTCGGAAACTTATATATATTTG 24887 36 100.0 30 .................................... TGGGCAGGATTTGAAGCAGCAGAACTGATA 24821 36 100.0 30 .................................... AATTGAATATGACGGCAGAACCGTCCCCGC 24755 36 100.0 30 .................................... CAGCTTGGAAACCATCACCGATAACATTCG 24689 36 100.0 30 .................................... TAACTTCATCGCTATATTGTAATACTTTGT 24623 36 100.0 29 .................................... TGATGAATATAAGAATCAGACAAGCCAGA 24558 36 100.0 30 .................................... GTGTTCGCGCCCATACAACTTATAGTACCG 24492 36 100.0 31 .................................... CCTGTCGTATTGTTGTCCGAAAGCGTGATAC 24425 36 100.0 30 .................................... ACGCCCCTGACCTTGGTGTTAACGTTTTAG 24359 36 100.0 30 .................................... ATTTGAAAGTTACGACATACCACAGGACAC 24293 36 100.0 30 .................................... CCGTTGGGAAAAATACTGTTACAAGAATTG 24227 36 100.0 30 .................................... GTTCCATTGATACCGAACACCAAGCGTCCG 24161 36 100.0 30 .................................... ATGCTTGATAGATTATCGCCTGAGCGTACT 24095 36 100.0 30 .................................... ACTCACTAACACATAAACAGTATAATATAA 24029 36 100.0 30 .................................... GGACTACTATAAGCAGTTTGACTAATTCGA 23963 36 100.0 30 .................................... TACTGAGGGAACATATACTAATGCTAACTT 23897 36 100.0 30 .................................... AACGTTTGGAAGCCGAAGGCAAGGAAGATG 23831 36 100.0 30 .................................... ATGAACGCTGAGCAAAAAGCAGAATACGAA 23765 36 100.0 30 .................................... GGAACACAGCTGACGTTTTGGAAGAAATGG 23699 36 100.0 30 .................................... GAGATTTTTAGTTTCACCAGAAAGTTTTGC 23633 36 100.0 30 .................................... TAGTAACGTATTCTGCAATGTCAAGCGGGT 23567 36 100.0 30 .................................... ATAATTTGGTCAACATATACGTTAGCTACT 23501 36 100.0 30 .................................... AGAATGTTTTCGCCCTCTTTCTTACCAGCA 23435 36 100.0 30 .................................... CTTCCTTGCTGTCGTCTCTCAAGTCCTTAT 23369 36 100.0 30 .................................... CTTCTTCTGACAAGTTAGCTACCATTGAAA 23303 36 100.0 30 .................................... CTATTTCCTCATCATAGTCAACAACTTTAT 23237 36 100.0 30 .................................... CTATTTCCTCATCATAGTCAACAACTTTAT 23171 36 100.0 30 .................................... CCGTGCGTAATTCTGGAGCTATTTCTGCTG 23105 36 97.2 30 ......A............................. TGCTTTCACGTTTACCAATGTCATAGCCAA 23039 36 100.0 29 .................................... GAGCTAAGGCGCAACGATTCACGTAATGA 22974 36 100.0 29 .................................... TGCAACGGACAAAACATGGAATGGTGGAC 22909 36 100.0 30 .................................... ATGAACGCTGAGCAAAAAGCAGAATACGAA 22843 36 100.0 30 .................................... GGAACACAGCTGACGTTTTGGAAGAAATGG 22777 36 100.0 30 .................................... TGGCTTACCGTCAAACATTACGACTTTTTC 22711 36 100.0 30 .................................... CAATTACGAGCGCAGACAAGCGCTTCTAGG 22645 36 100.0 30 .................................... CTATTTCCTCATCATAGTCAACAACTTTAT 22579 36 100.0 30 .................................... AACAATGTTACTGCTTGTTTCAAGTCACCA 22513 36 100.0 30 .................................... CCGTGCGTAATTCTGGAGCTATTTCTGCTG 22447 36 100.0 30 .................................... TGCTTTCACGTTTACCAATGTCATAGCCAA 22381 36 100.0 30 .................................... GGTTTAGCTAGCTTACAACAGCAATTTAAA 22315 36 100.0 30 .................................... GACCGCCTGTAAATAGCGAATTGCTAGCTA 22249 36 100.0 30 .................................... AAAACAATATACGAAAATTCGTATTAGAAA 22183 36 100.0 30 .................................... CAACGATGCTAAAGCTAATCGTGAGAATTA 22117 36 100.0 30 .................................... CAAGTTGTAGAAATCCCGTACTGTGTAGCA 22051 36 100.0 30 .................................... TGGTTTATGGCTAAAAAAATAGGAATTTTG 21985 36 97.2 0 .............................A...... | ========== ====== ====== ====== ==================================== =============================== ================== 50 36 99.9 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTTATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGTACAATTTTCCCGTCAAATGAAAGTTATTTATATGTTACTAAAGAAACAGTTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTAGATTTTATGTATGAAAGATTTATTGGTAAATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAAAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTTCAGATATGGTAGCCATTAAGATTTTAAATAGTTTATACCAGTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGACCCGCTAGAAATAAGCTTTTTAAAGGACAAAGATTGACTTTTTTGCCTAATCAAACTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : ACTAATATGCTTTTAGACGAAATCATTTTATAATATTTAACCTTTTTAGCATCTTATGATGCTTTTTTCTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAACAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGACAAGAGAAGATTCGTAATTTCTCTATTATTGCACATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAGACGGTTTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAGCGTGAGCGTGGTATCACGATTAAGCTTAATGCGATTGAGTTGAACTACACGGCTAAAGATGGTGAAACCTACATTTTCCACTTGATTGACACCCCAGGACACGTTGACTTTTCATATGAGGTGTCACGTTCTTTGGCGGCTTGTGAGGGGGCAATTTTGGTTGTCGATGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //