Array 1 1526552-1526401 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011386.1 Lactobacillus helveticus strain MB2-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1526551 29 100.0 32 ............................. TACTTAAAATTATGCACTACTGGAGGCATTTA 1526490 29 100.0 32 ............................. TGTCTATTTTTTCTTTTTGCGCCTCCGTGGCT 1526429 29 72.4 0 .....................CAACCAAA | ========== ====== ====== ====== ============================= ================================ ================== 3 29 90.8 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : CCCTATCTGGGTTTACAAAATATATCCTCGTTATCCGATGTATAAAACAAAATATGTAAAAGCATATAAATTAAAGCCTGGAGACACACCCATAGTAAGACATCGTGGTGTTGACTGGGGTTGGACCGTTGGAAAGTCTTATCGTTATTGTATTTTAAAAGACAGCTTTTCTTGGTTTGATGGCTATTCAAAATATAAATGGGTTGACCAAGGCTTACTTGATGGCTCTATGAAAGATGAGCATTTTGCCTACAAATTCACTTGGAAACAGTATTGTCAATTAATTAAAGCCGGTATCTACACAACAGTACATCCAAAGAAATTATGGAACTCCAAAATTAAGAAGATGATTGAAAGATGGAAGCCTGAGACTGATAACAGCTAATAAAAAAGCCCGCCTACTCAAACTAGCAGACGGGTTGTATTTAACACATCAAAAGAACACAGGTTCACTAAAAAGGAGGTGAACACAATGCCAAAAAGAAAAAATACCGCTATTA # Right flank : AACAGGACTAACTCAACCAGATTAGTCCTGTTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACTGGATACCAAACAAATTCAACATCAACATTTTTTACTTCTAGCACTTTTTTAACTGCCTGAGTAATACTATCAATTAGGTAGCCAGTTAACGGACAAGTAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAAACCTAGATTGACTACATCAACATTCAATTCAGGATCGATAACTGTCGCCAATTGATTGATAATATCGTTTTTAATTGTTTCACCGTCACGCATTTTGTCACGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGAGTACCAGCTAAGCCACCGATTCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCACG # Questionable array : NO Score: 4.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.38%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1647002-1644308 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011386.1 Lactobacillus helveticus strain MB2-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================== ================== 1647001 30 100.0 37 .............................. CAATGTCAGAATTTTCATACAAAAATCCTAAAAACTT 1646934 30 100.0 35 .............................. GATCAATAGAAAGGGCAGTGATTGGAATATGCCGA 1646869 30 100.0 37 .............................. CTCGGCTTTTATACAGATCAATTCAATTCATTCACTG 1646802 30 100.0 34 .............................. ACTGAAACTAAGTGAACGTTATGTATAGGGCACA 1646738 30 100.0 36 .............................. AGTCAACAATGGTATTAGTGGAATTGACAAGGTATT 1646672 30 100.0 35 .............................. AAGAACCAATGGAACGACTTTGGCAACTATAAGTA 1646607 30 100.0 35 .............................. AGCAAAGGTGCTGCTATCAATTGGTCAATTCCTGA 1646542 30 100.0 36 .............................. TTTGCTCATCAATATATGCGATTAATATCCTAACGT 1646476 30 100.0 35 .............................. TGTAAGCAAACAGCGTGATCATGTGATTTATCACG 1646411 30 100.0 37 .............................. AAGTTTGAGTTTGAGAAACGCATTGCTTTTATGTTTC 1646344 30 100.0 36 .............................. TGCTAAGCCTTCGATCATCTCATAATCAATATCTGC 1646278 30 100.0 35 .............................. GATATTGCCCGAAATGTTAAGGGCGCAAAGCTCAG 1646213 30 100.0 37 .............................. TCGAACAACAGCAGAATAACCACATAACTCCATACAA 1646146 30 100.0 37 .............................. ATATAACGCTTATATACGCTAATTTACAATTTTAAGC 1646079 30 100.0 36 .............................. CACAACTCACTCACTCAATAACTTAACTCACTTAAA 1646013 30 100.0 37 .............................. TAATATAAGTTGTGATTTTTAAGCCATTTCTCGCTTA 1645946 30 100.0 36 .............................. AAGATGAAAAGCTAGTTGAAAAGTATCTTGAATTGA 1645880 30 100.0 36 .............................. TGCTATATGTGCAAGGTAAAGGGCACACGGAAAAAG 1645814 30 100.0 35 .............................. TTTCAAAAAAAGTAGAAAACTACAAAGAGCTTGCT 1645749 30 100.0 35 .............................. TGCTTAGCAGTATAAGTATGTTTATTTAGATCATC 1645684 30 100.0 36 .............................. TGCTATATGTGCAAGGTAAAGGGCACACGGAAAAAG 1645618 30 100.0 37 .............................. TTAACCTATCTGCTAGCGAACACAACAAGGCAAACTC 1645551 30 100.0 36 .............................. GCTATCTGACGTGTAGCCCAATCAACTGAACTAGAT 1645485 30 100.0 36 .............................. TATCTAAGCACCTACTTTCATGCCGTGTGTAGCAAG 1645419 30 100.0 35 .............................. GATGAACTAAAGCAGACTTATGCTGATTTAGCTGC 1645354 30 100.0 36 .............................. CTCTTAGTACCTATCCGGCGCTGTGAACGGTTTTGA 1645288 30 100.0 36 .............................. ATTAGTAGCTGACTACAATTCCTTACAATCTAATCA 1645222 30 100.0 63 .............................. TTAAGTCATATAATCTTAAAAACGGTAATAAGTCATATAATCTTAAAAACGGTAAAAAGAAGT 1645129 30 100.0 35 .............................. TTAAATTCAACAATGCAGGAAATGGTGATCAATCA 1645064 30 100.0 35 .............................. TGCTTAGCAGTATAAGTATGTTTATTTAGATCATC 1644999 30 100.0 37 .............................. TTGCTTTGAGTGGTAAAACTTATTTTGCTTTGCTTTA 1644932 30 100.0 37 .............................. AGTGATTTAAGCTTGACTCAAGGTGATGATAAGGACG 1644865 30 100.0 35 .............................. TCTATCTATATCCTTTCTTTTGGTCGTTGGACTTT 1644800 30 100.0 36 .............................. ACTGCATGGGGGATTAAGTCAGCATTAATGGAGCTT 1644734 30 100.0 36 .............................. CACGATGACAATGTCGACTCAATGGTTTATGCCGTT 1644668 30 100.0 36 .............................. ACAAATTTTTACATACATTCATGAGAAAACCACACC 1644602 30 100.0 35 .............................. TAATTCAGGTGGTAACGGAATGCTTGAACCCATTG 1644537 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 1644471 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 1644403 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 1644337 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== =============================================================== ================== 41 30 98.7 37 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGACAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCTTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGATGACCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //