Array 1 1108741-1105006 **** Predicted by CRISPRDetect 2.4 *** >NZ_CH672429.1 Marinomonas sp. MED121 scf_1099517007713, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================== ================== 1108740 28 85.7 32 .G..T....T....G............. TGGGTAAATGCGTGAATCGTTTTCCACTTCAA 1108680 28 96.4 32 ....A....................... ATCAATCCAAGCAACGGTATTATCTGAAAAAG 1108620 28 100.0 110 ............................ ATCGGTGTAGATTAGTTGGTTTGTTAACACATCCTTGATGAGCGGCACCCGGAAAAAACATCCGTGTTTTTTCGTTCAGCCAGACGGTGCGTTGCACCTAAAGAAACTGG 1108482 26 85.7 32 C...A.--.................... TGTACGCTGATCGACACTACAATGACTACAAC 1108424 28 100.0 32 ............................ TCATTACCGTTACCATCAGCCATTGTGATTAT 1108364 28 100.0 32 ............................ AAAGGATTCAAAAAGGGAACATGAAACCTTTT 1108304 28 100.0 32 ............................ GTTCGCGGCATCATTTGTTACTAAGTTATACT 1108244 28 100.0 32 ............................ ATTTAATTTAGTTTTGACAGCCACATAACAGA 1108184 28 100.0 32 ............................ AGTTAGTTTTTGTGGGTTATGCCGCTAAGAAT 1108124 28 100.0 32 ............................ ACGCTCTCGAGTACATCACCGTCCTCATTCTG 1108064 28 100.0 32 ............................ TTGAGCATCAATTAATCCTGACATACCAAACA 1108004 28 96.4 32 ....A....................... TCTGTTTTACTATTAATTTCACCCTCACCTTC 1107944 28 100.0 32 ............................ TACAATGCCCTGTAAAAGGGTTACATCTAAAG 1107884 28 100.0 32 ............................ GTCACCAATCGCGTGATTCCAGTAAAAACCGT 1107824 28 100.0 32 ............................ TATACTTTTGCACACGCAACAGACCCATACGC 1107764 28 100.0 32 ............................ TAAGTTATCAAGTGTGGCTAAATCACCCGTAA 1107704 28 100.0 32 ............................ TAACCGAAGGTGCTTTGAAGTACGACCCTTCA 1107644 28 100.0 32 ............................ AGTTTAAAAGGTGAAAATCAGGCTTTTAGCAC 1107584 28 100.0 32 ............................ TTAAATAAAAAAAGCAGCGTTAATAGTATCGT 1107524 28 100.0 32 ............................ TAACTCAAAAGACGGTTTATACCTTCGGGGCC 1107464 28 100.0 32 ............................ TTCAGAACCATCACCTATTTCAACTTCTAATG 1107404 28 100.0 32 ............................ TCTAGGCTTTCACGAATTAACCTGGCAACCGC 1107344 28 100.0 32 ............................ TTGAAGGCGGCGTCAGCTAACACGCTGCAGCG 1107284 28 100.0 32 ............................ TTGGTTTATGGAGTCGACCGCGTCGTCGAATT 1107224 28 100.0 108 ............................ AACGGTGTAGATTAGTTGATTTGTTAACACATCCTTGATGAACGTCACCCGGAAAAAACATCCGTGTTTTTTCGTTCAGCCAGACGGTGCGTTGCACCTAAAGAAACT 1107088 28 75.0 32 .GCTT.AC...T................ ATTTAAGTGTGTGCTAAGGTCGATCAAATGCA 1107028 28 100.0 32 ............................ ATTGTGTAGTGAAACTGAGGTTCACGATTAGC 1106968 28 92.9 32 ....A........C.............. GTAATGCTTAACAAAAAATGGTTCAAGAAAGA 1106908 28 92.9 32 ....A........C.............. AAACTGGTACGTTTGAAAATTCTGATTTTGTC 1106848 28 96.4 32 ....A....................... AGTATTCGAGTTGAGCCTGACTTTGCAACGAC 1106788 28 96.4 32 ....A....................... AGAAGCCCTTCACTTCTCCTGACCCTTTAATT 1106728 28 96.4 32 ....A....................... AGGTGAGTACGCATTGGATGGTTCAGCACTTA 1106668 28 96.4 32 ....A....................... CGCAATCAACACAGCATTGATACGCGCATCGG 1106608 28 96.4 32 ....A....................... GTAAGAACAAAGTTGAGATAGACCTAACAGAT 1106548 28 96.4 32 ....A....................... ATTACGCAACACTCCCTATCTTTTGTCCTTGC 1106488 28 96.4 32 ....A....................... GAGGGAAAAATGAACTTAAAATCCGTAGTGAC 1106428 28 96.4 32 ....A....................... CATTGAGGATACTTTTGTCAGCGGCCGCGTAG 1106368 28 96.4 32 ....A....................... AACATAAAACATTGCATCGTTAAGCTCTATCA 1106308 28 96.4 110 ....A....................... AACGGTGTAGATTAGTTGGTTTGTTAACACATCCTTGATGAGCGTCACCCGGAAAAAACATCCGTGTTTTTTCGTTCAGCCAGACGGTGCGTTGCACCTAAAGAAACTGG 1106170 26 85.7 32 C...A.--.................... GCCACACGGCAAAATTACGCCTGTATTTTGTG 1106112 28 100.0 32 ............................ AGAACGACATTGTAGAGATACGCACCGCCCAG 1106052 28 96.4 32 ....A....................... ACGATGGCGACGGTGCAGGCGTTCAGACTGAC 1105992 28 96.4 32 ....A....................... TTGGGTTGCTGGGGGTGTGCCCTCTGTAGCTA 1105932 28 96.4 32 ....A....................... GGACGATGCTGATCCAAACGTTGATTATTTCA 1105872 28 92.9 32 ....AA...................... CATCGCGTTAGTCATAGGCGTGTCTAGGTCTT 1105812 28 96.4 32 ....A....................... TAGGGCAAGCATTGCCGGAAGTGATAGTGTTT 1105752 28 96.4 31 ....T....................... AACTAAATCAAACATTAGAGGTAGAATGCTA 1105693 28 96.4 32 ....................T....... TTTACCTGTTCTGAAAACAAACTCACCAGCAC 1105633 28 100.0 32 ............................ ATGGTACGCGAACACTCCTCAAAGTTGATGAG 1105573 28 96.4 32 ....A....................... ATTTACATCACCACTAAATTAGTTTTATAACT 1105513 28 100.0 32 ............................ TCACCATGACGACACTTAGACGCAATCATGTG 1105453 28 100.0 32 ............................ TTTTTGAAGCTCACCTGAAAACGGGTTTAATT 1105393 28 100.0 32 ............................ TGCGACAAGCGAACCACAGGAGAAATTTTATT 1105333 28 100.0 32 ............................ TGTCTCAGGTTTATAACCATCATAATCAGCAT 1105273 28 100.0 32 ............................ ATCTAGCGCCGCCCATACTGCCATCATGAACC 1105213 28 92.9 32 ....A........C.............. TTGCCGCCACATTTCGCAAATCGAGTTTAAAA 1105153 28 92.9 32 ....A........C.............. TTCATGGACAATATAGCCATATAACACATTCA 1105093 28 96.4 32 ....A....................... GCACGGTTTAAAGCTACCCAACATGAAAGAAA 1105033 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================================================================================== ================== 59 28 97.0 36 GTTCCCTGCCGAATAGGCAGCTTAGAAA # Left flank : ACGTTTAGAGGATTATGCGCATGTTAAAGGGGTGAAGCCCGTGCCTGCTGATGTGTCTTATGTGACCTATACGCGCAAAAGTGTCAAAAGTCCGGCGCGTATCGACAAAGAGATGCAAAAGAAGGCTGAGCTATGGTCGTTAAAGTCAGGAAAACCTTTGGCAGAGTGTTTTGAGGAATTAGAAAAAACCAAACCTCAATATGAAAGTAAATTGCCTTTTATTTATTTGCATAGTCAAGAAACTAAACAAAGATCTCCTGAGAAAAGCAGCAAGTTTCCACTATTTATTGAAATGAAACTATTAGACAAAAAACAATCGGGTTTTTTTGATTGTTATGGACTCAGCTCCAAATCAAATACTGCCGAGAATCTAGGGGCAGTGCCCTTGTTCTAATGGTTTGCTCTTTAAAAATACATAAAGAAATCAGTGGGTTGTGATAGTGATAATAAAGGTGATATTTCTCATCTAACTTACTATTGCAGCTCATTTTTGTGTGTCT # Right flank : AAAAACATTAGATTCTAAAGTTTTCTTCTCGTTCCCATGCTCCGCGTGGGAATGCATCCCCTTGAGCTCTAGCTCAAGTAAGATCTTAAAACGGTAGCTTAGCTACCTAATATGAATTCCCACGGAGGACCGCGGGAACTAGATAAATTCTTGCTAAGTAGCTAGATATAAAATTCACATCATAGAGGAAATTATTTGGTATAAATTACTAATCTCAGATGTTTGGTGCTTAATTTTCTCATTAATACACTGGTTGAATTGTATTTCGTAAGTGATCGTTTTTTGTCAACAAAGTAGCTCTGTAAATCACAAAACTTTGTTGTGAATTCAGTCCATTCTTTACGGTTTTTCTGCATGTCTTTTAAGTAACCTTTGTGGTCTTCTGAAGATTTGAAATGATTTTCAATTTTTTTATACTCTGAAGCTAGCTTTATTTGGTTGTTTTCTATTTTTTCTTTAATGCAATTATTTATTCCCGGCAGATATTTTTCTTTGAAGCA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.31, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCCCTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [10-9] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //