Array 1 258655-261067 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043939.1 Paucilactobacillus nenjiangensis strain SH-Y15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 258655 36 100.0 30 .................................... CTGACTGATGGTATGGAAGAAGCACAAGAA 258721 36 100.0 30 .................................... CGCTATAAAAGCTAAACAAGGCCACACCCC 258787 36 100.0 30 .................................... CCTGTTTCAGTACATCTAGCCGTCGCGCGA 258853 36 100.0 30 .................................... ATAATCACACCTAAGCCGATTAACGCAACT 258919 36 100.0 30 .................................... GCCACCTGAAACACTGCTATCAAGGGCTGC 258985 36 100.0 30 .................................... TGATATGTATGTAGAAGACTAAAATAAATA 259051 36 100.0 30 .................................... TATTTCCAATCTAAAAAAGAGTACTAGCCC 259117 36 100.0 30 .................................... GCATAAATTGCAGCATTTGGTGCAATTAGT 259183 36 100.0 30 .................................... TGTACCAATCAGAACCGTAATGAGCTTTCC 259249 36 100.0 30 .................................... CTGAACCTTAACTGGCACATTATTCCAATT 259315 36 100.0 30 .................................... ATTGAATTGATTAATAAGAACGTGAATGCG 259381 36 100.0 30 .................................... ATTATCGAAACAAAAGTCAATAATTGTGGT 259447 36 100.0 30 .................................... TTATCTTTAGAGCTACCAGTGACTAAATCT 259513 36 100.0 30 .................................... CTTTTTACATAAATAAAGAAGCCTACTAGC 259579 36 100.0 30 .................................... TATTTCTGAACTTTCACCAAAACTATTCAA 259645 36 100.0 30 .................................... CCAGCCAGCCGCCATTAAGGCTGCGTAATG 259711 36 97.2 31 ............................C....... ACAACACTTTTGGCCAAATTAGTTTGTGCCG 259778 36 100.0 30 .................................... TTGTGCGGAATATGAAGAATCGGTTAACAC 259844 36 100.0 30 .................................... AACTGATAACACGGTTAAACAAGTAGGCAA 259910 36 100.0 30 .................................... CATCATACATACCAGATTTTACGCAAGCAT 259976 36 100.0 30 .................................... GATGAACGTCAAAAGCTTTTCAATATTCAG 260042 36 100.0 30 .................................... TGTCAAATATCTAACAGCACCAGTTAAACT 260108 36 100.0 30 .................................... TTCGCTACCGTTCTAAAAATTAAGGGGCTG 260174 36 100.0 30 .................................... TGATTAGCAAAACCATCTTCAATCCTGGGC 260240 36 100.0 30 .................................... TTCCAATATTTCACTAAACTCCATATTTTC 260306 36 100.0 30 .................................... ACGATTATTAACAAGCATGATGCTCAAGAA 260372 36 100.0 30 .................................... GTGTTTTAATTCAACTCTATCTGCTGTTAC 260438 36 100.0 30 .................................... AATGGCAATGTACGTATTAAATCAAATCGC 260504 36 100.0 30 .................................... GAGAAGAAACGCCGAGCAGACGATAACAGC 260570 36 100.0 30 .................................... TAAAACAATCAAAGCTAATGTAAAAATATC 260636 36 100.0 30 .................................... TGCAATTCAGCAAGTTGCTTTTGTGCATCG 260702 36 100.0 30 .................................... ATGTGGACTGATAAAGTCGATATGGCATCA 260768 36 100.0 30 .................................... GCAATGTGCTATCGCCAAGTTCTTCCAGAT 260834 36 100.0 30 .................................... TTCTTCATCTTCATCGATAACGGCAATCTG 260900 36 100.0 30 .................................... CTATTTTCTTTATAATTCTTGGATGCTTTA 260966 36 100.0 30 .................................... TTCATCGGATACTTGAGTAACCTGAGTTTG 261032 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 37 36 99.9 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCGAGACC # Left flank : TGGAAAATCTTAACAAGTTGTTTCAAGTTAAGATTCTCAAACAGGTGTACCAAATAATGCCAGATGAAACACAACAAAAGTTGATTGATTTAACTAGACAGATAAAAAGTATTGTGTCAGACACAGTTTACATGATTGATTTACCACTGGAAGTTAATGCCGAAATTGATATTATGAAGATAATAAAATTTTCAGAAATTGAATACAGTCCTACGATGACATTAGGTCCATATGCTATAATTGAGACAATTCTAAAAACTTTAAGTGAGTTAAATGAAACAAAAATTATTGGGTTTATGAACATATCTGACTATTTGAGAGAATCTGAATTTGTGGATTTAGTTCAATTAGTTAAGACATTAGATTTGAATGTTCTTCTCATTAAATTTTCAGAAATTCAGAGGTCTGAAATATATAATGAATGCCGTTACTACTACATTGATAATGATTTTGTTGATTGGCGATACTGATCAAAATGAAAGAATTATTATAATTAGACG # Right flank : CACTATTGTCAGCTTTATGTATTCGCCATTCGTTTTAGAAGAGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATTAATCGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAATCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGCTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCGAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1414032-1412081 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043939.1 Paucilactobacillus nenjiangensis strain SH-Y15 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1414031 36 100.0 30 .................................... GTCATTTTCAAGCGGATTTAAGATATTGTT 1413965 36 100.0 30 .................................... TACAACAGTAAACCTTTAACACCTTATTCT 1413899 36 100.0 32 .................................... CCGTAGATACCCATCTTCTGGAGGTGTAAACA 1413831 36 100.0 30 .................................... CTAGCATCATGGTATGCATCCGGGGCGTGG 1413765 36 100.0 30 .................................... TAGCTAATAACGCTAGTGCCCTTGCTCAAG 1413699 36 100.0 30 .................................... CTAGACAACTGCGATTACGCACAGAACATT 1413633 36 100.0 30 .................................... AAATCTGATAACGTGAGCTGTTGTTCTCTT 1413567 36 100.0 30 .................................... GGAAAGCTACGAAATCAATCCAACCCAAGC 1413501 36 100.0 30 .................................... TAATCACTAAATTAAACTGTCCGTAAATTT 1413435 36 100.0 30 .................................... ACGCCGTGCAACATCATCATCATAAATTAT 1413369 36 100.0 30 .................................... TTTAATAGTATATTGTAAAACTATTTTACT 1413303 36 100.0 30 .................................... CTGGCCTTAGCGTCGTTAGCAATGTCAGTC 1413237 36 100.0 30 .................................... AGATTAACTGGAAAGTACGAGTATTGAGCA 1413171 36 100.0 30 .................................... CAGGGAGCATATAACACGCTGGGCGGATGC 1413105 36 100.0 30 .................................... TTGGGCTTTATATCCTGGGACAGTCCAACT 1413039 36 100.0 30 .................................... CAATTATGCACAATAAAACCACCATTAACA 1412973 36 100.0 30 .................................... GTTGCCTTAAGGAAAATATACCTTGATACC 1412907 36 100.0 30 .................................... AGACTGCGAGAAAGAAGAGGTGACTGACGA 1412841 36 100.0 30 .................................... GGTGGCAATGGACCTACATGACATGAGTTT 1412775 36 100.0 30 .................................... CTCTAAGCGTCTGCATGATTGTCCCCTTTA 1412709 36 100.0 30 .................................... ACAAGAAAATGTATGAAGGAAAGTTTAATT 1412643 36 100.0 30 .................................... TGGAACAATTAAGTGCAGGCATGTATTCAC 1412577 36 100.0 30 .................................... CATGTACGAGCTGTGAGCGTGTTCTCATCT 1412511 36 100.0 30 .................................... TTAACGTTAGTCGTTAACTTCTTGTCTTCG 1412445 36 100.0 30 .................................... CTAACTAATGAAACTAACACCAAACATAGG 1412379 36 100.0 30 .................................... CAGCAAACAGACGTCACGCTTAATAACACT 1412313 36 100.0 30 .................................... GAATAGTCTTGCATAACCTTATAGCCGGAT 1412247 36 100.0 30 .................................... ACAAAGTGTGAACGTTGATACCGCTGAAGA 1412181 36 100.0 30 .................................... TATAGTATATATAGGAATTTGCGTTATTTT 1412115 35 83.3 0 ...............CG.......A...-..A...T | ========== ====== ====== ====== ==================================== ================================ ================== 30 36 99.4 30 GTTTTAGAAGCTTGGTAAAAATATGAGTTACGATCC # Left flank : AGAATGATTTAGATAAATTGTTTACTAACCGACTTTACAAGCATTTTAAAGAGGTAGTAACTCCCGAGCAACAACAGCAAATTTTTGAATTAAGCCAACAGCTTAAATTGGCGGTGTTATGCGCGTCGTACTCACTAGATTTACCATTACAAATTGAAGAACAAACGGAATTAGAAAAAGTTTTTAAATTTTGTGATTTAAGATTTATACCGACTGTAGTTAACCGTCCATATGATATAATTGAGACACTTCTAAAAACTTCTGTAGAGTTAAATGAATCTCGGATTTTAGGACTCATGAATGTTTCTGACTATTTAACGCGTGACGAGTTTAGCGAGTTAAATAGATTGATTCAAATGTTAAATATTAAAATTATTCTCATTAAGTTCTCGGAGATTAATCGATATAAAATGTTTGAAGGATGCCGGTATTACTACGTTGATAATGATTATGTTGAATGGCACTATGAATGATCATTATAGATTGATTATAAAATAACG # Right flank : CATTGCTCTAATCACCGATGTTCTTTTACCTAAGATGCCGAATTATATCTTGAGTCAGATATAACAAACTTGGCATGTTGCGAATCATTTGCGCACGATCAGACACTATGAGACCATAACAGCAGTGAACTTAACGAACGGAGAAAATTACTGATGATTGAATGGTCACAAGATACGATTGATGCGTTTCGGCAAACACTGCTTGATTGGTACGATACTCATGGGCGTGATTTACCGTGGCGGCAGGATCATGATCCGTACCACGTTTGGATTTCAGAAATTATGTTGCAACAGACCCAGGTGAATACGGTGATTCCGTACTACGAACGGTTTATGACGTGGTTTCCGACGGTACAAGAGCTCGCGACAGCACCAGAAGCACGATTAATGAAGGCGTGGGAAGGGCTCGGGTACTATTCACGAGCGCGCAATTTGCAGAAGGCGGCCCGACAGATTGTCGACGATTATCACGGACAATGGCCGCAAACGGCAGACGTGTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGCTTGGTAAAAATATGAGTTACGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //