Array 1 18985-18785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114162.1 Prevotella sp. C561 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 18984 47 100.0 29 ............................................... ACACATTAAAGTTTCCTATATTTCTTCAA 18908 47 100.0 30 ............................................... TTCTCTTTCCTCCTGGAGAAAAACCGTCTA 18831 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGATTTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Left flank : CTTGAATGTGATCTT # Right flank : TTAAAAGTTATATTTACCTGTATTACAGCAAGTAACAAGACTTTTGTACAAATAAAAAATGCAAAACAAAAGAGTCCTATCACAATGATGGGACTCTTTTTTAGAATAATTCTAGTTGCTGTCCTGGAGCATTAGGTTCTTGTGGCTGAGTTCCACGAAAAAGCTCTATCTCACCAAATTGTTTATCAGTAATGACCATAATACAGACATTACCAGAATTAGGCATAAATGATTTTACACGTTTCACATGAACATCTGCATTCTCTCTGCTTGCGCAATGACGAACATAGATTGACAATTGAAACATTGTAAAACCATCTTTCATCAAATCTTTTCGGAAGATAGTATAAGCACGCTTTTCCTTGTTTGTATTCGTTGGAAGATCAAAAAAGACCATTACCCACATAACCCTATATTCGCTAAGTCGTTGCATCAAAGAAAGGAAGGATAAGAAATTTCACGAGCTTCCCCATTATAGCACTTCGCAAGACTTGCAGTTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 479-1137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114190.1 Prevotella sp. C561 supercont1.52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 479 47 100.0 29 ............................................... CGATGACCAGGTGAAGCTACTGCTACGCT 555 47 100.0 29 ............................................... TAGTCAATTATCTTATAGCAAGCAGTACT 631 47 100.0 30 ............................................... GGCGGAGCGTCAGAAGAAACAACATCAGTG 708 47 100.0 30 ............................................... AAATCTCCCTATTAGGGTGATTGAGTTTCA 785 47 100.0 29 ............................................... TAGTCAATTATCTTATAGCAAGCGGTAGA 861 47 100.0 29 ............................................... TCCTTGTCTTCGATAGCTTCTTCTGTCAG 937 47 100.0 30 ............................................... GTAACCTAACTGAGGGTATCTCAGAATTTG T [944] 1015 47 100.0 29 ............................................... AAGATTCTATCAAAGTAACCTAACTGAGG 1091 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 100.0 30 GTTGTGATTTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Left flank : CGCTCTTGTAGACAATGTTCTCTTCAGCAAGCTCCTTTAGTCCGCGCCCAACAGTGTCGGCACCGGGTAATAGCGTATTAGGTCTCTGCTTGAACTGCCCTATAAGCACATTGATGTCCTCAAGGCATTCTCCACCACAAAGGTAACTGAAGAAGAGAGAGCCGAAAATACTTCCATGGCTGAATGCTTTGCCACTACTTCCACGTTTGCCCAATACAGATTCGGTAAGTTTTTCAAAGCCCAACTTTGAGAAAACGTCCATAATATGATAAATTCCACCGAAAGAAGTGATATTCTCGTTTTTAATTGCTACCTTTGTCATGTCAGATTTTTGCTTACTTGTTATGTTTGCAGCACTAAGATAGGTGAAATTTCTGACATATCCAAGTGTTTTGAGAACTTTGTTTCTCAGACACTTGGAGTTCTTACAAGAATTTATGCTGCGGAATTAAGGAGTTATATAAAATTGATGGAACTGG # Right flank : CGGTATCAAAAGGACGCTACAAGCTTGTAGTTGTGATTTGCTTCAAAATGTGTATCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 52-879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114198.1 Prevotella sp. C561 supercont1.60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 52 35 94.6 33 ..........-..-....................... ATATCCATGTTTTTGAAAGTGTGGACAATTTTA 120 37 100.0 37 ..................................... TCTGGGTTTTCAAATACATTACCGATAATACTAAATG 194 37 100.0 36 ..................................... AAACAAGGAGACTTTATCTCTCGAAATGTCAATGTC 267 37 100.0 37 ..................................... GTTTTACATAGAAGAGTGGGAAGTAAAATAATAAGGA 341 37 100.0 34 ..................................... AACAATACCCAGAGTTTATGTTTCAGGATTTCAG 412 37 100.0 38 ..................................... GATGGGCAGCAACAGAACTTAAGTACGTCCTTGTAATA 487 37 100.0 36 ..................................... AAGGCAAAGAATAGAGAGATAGCTGTAAAAGCAATT 560 37 100.0 34 ..................................... GGAATAGTCCCACAAAACAAACAAATAAAAGAAT 631 37 100.0 35 ..................................... TACACACACTACCTGTACTTTTTAAGTATGGAGCA 703 37 100.0 33 ..................................... AAATTAATTTATAACTTCATAAACAACAAAGAA 773 37 100.0 33 ..................................... ATAAAAAAAAGTTCGGGTCGAAGATCCAAAAAC 843 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 12 37 99.5 35 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Left flank : AAGATAACTCTCAGAGATATCCATGTTTTTGAAAGTAGTTGGACAATTTTAG # Right flank : GTCCTAAAGAGGATAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 64759-63998 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114144.1 Prevotella sp. C561 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 64758 37 91.9 37 A..............A............G........ GTGTTACGTTCAAGTCAAATCGAATGTCAGATGTTGT C [64754] 64683 37 94.6 38 ...............A.........G........... TACACCACCCTTACTTTCAAGCGCAGCTCTGTAGACCT 64608 37 100.0 36 ..................................... AAAGAACGACCGAGTTCTCAATGGAGAAGGTCGTGA 64535 37 97.3 34 ..............................T...... GAGTATCAGAAAAAGTACCAGAGTACGCTTACTG 64464 37 100.0 33 ..................................... TAAGGGTCAACCTCTTATCCTTTGCCATGAGGA 64394 37 100.0 37 ..................................... CCGCTAACCCTGAAGGCTTTACCGTTAATGCGAAAGT 64320 37 100.0 35 ..................................... ACAACTGAAATTCGGCTCTACAGAGTTTTAGATAT 64248 37 100.0 35 ..................................... ATTTAAAATGATAAGAGATATGAAGGCTTCAATAG 64176 37 100.0 34 ..................................... CTAAACTCGAAGGAGTATGGTTAAGCGTAAAATA 64105 37 100.0 34 ..................................... AATGGACAAACATTTGAAATCAATCCAGAATCAG 64034 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 98.5 35 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Left flank : CTATATGATTTACTTGAAATGCATAATTACATACAGAAGCTAATACTTTAGCATACAACACACAATGAGCATTAGTTTCCTTCTTGAATGTAACTGGGCTACATTTATCAGAAAACTTTAATGTCTCAGCAGTTAGCTTAACACTATAATCAATTATTTCATCTTCAGACATGTTTTTTGTCTTAGACTTAATAATTTCTTTTTGAAACTTTGGAATAGTTATTGAACCATCTCTATTATGGCTTTTTACTAATCCCAAACGAAGAAAAGGAATAACCAAACTTATTAGTAAAATAGTAATTAATCCTCTTTTGAGTAATTTATTTTTAACTCCTATATTAATTAAATAGATAATAACATATAATACTAATACTACTATTATTAATAAAGGTACTAAAAATAAAAAACTCCATCCAAAATCACCATAGTGTTGAAATGAATAATCTAATTGTTCACCCATAATATAATTGTTATTGTTGTTTATATTTTCTTGATTTAAT # Right flank : GGTTAGGGGCGTGAAGGCTTTGTTTAAGGCAGGGGGAGAGTAGTAAGACTTATAAATCCGGGGTTTGTTAACAGAAATTAACTACTTTCTAAGCGGGTGCAAAGGTAGTTATTTCTTTTGCAAAATGTCAAGGAGCGCAGGGTTAAATAACAGTAATCTGGAGCGGAAAAACTTATAAGTTCGTTCCTACCTGATGTTTCCAGAAGCGGGAGGTGATATCCTCGAAGGATCCATCTGGGCGTCGGCGGTACATCCGCTGATTGGTGCGTGGGGAGTCGAGGCCACCGAGATGGCGGAGATAGGGACCCACTTTGATATAGTCGAAACGCTGTTGGTCGATAAGTGGGGAGATTGCTGTACGCCCAGTGTACCAGCCAACTTTCAGTCCTTCATGGTTCTGTCGCACGTGTTCAGCGAGCCTGTCGACTTCAGCTGGGTCGCCATCGCCCCCCATAAATCCCACACATGTTATCGTGTCTTTCGCTTCATAAATCAATGTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 137740-137416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114146.1 Prevotella sp. C561 supercont1.8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 137739 36 97.2 37 .G.................................. GGTATTCTGAAACAACTTTTTGGTTCTGATTAAGGAA G [137736] 137665 36 100.0 37 .................................... GAGCTGTATCTTCTTTCTTGACCCATGTTTCAAGGCT 137592 36 100.0 35 .................................... TGTATGTTAAGAGCCTTGACATTAATCAACAAATC 137521 36 100.0 34 .................................... GATATCCATGTTTTTGAAAGTGTGGACAATTTTA 137451 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 99.4 36 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGA # Left flank : TGCCACCTCTTCCTTTATTTTATTAGCTTCGTCTTTCTTTCCTTCTTTCATCAGTCCACCAATCTGCTTCGAGAGTTGATTCTGCTGCTGCTTGTTTGTGTCAAGCTTCTGCTGAGTCTCACGACGCAAACGGTCATATTCCAATACTTTCTCAACTGCCTCGCGTGCACCGTTGAAGTGTTTCTTCTCCAGTCCTTTGATGACGCGTTCAGTTTCTTCACTGATGAGCTTTAATGTAAGCATAACGTTCTAATCTTTATTTTAATTTGTTTCTGAGAGCAAAGTTACGAAAAAACTTCTATAAGTCAAAAACATTTATATTACTTATTTTGTTATTTGCTTGTTGGAAAGGAAGGGATAGTAACTTCTGATAAAGAAATATGTAATTACAAAAGACAAAGCCGTTACCAAAGCTTTGTACGTTGGATTTCTCTTTGTGTTATGCTGCTTTTTATGACAGCCGCAGTAAATCACTTGTCTGCAAAAACCTTATGCTGAAA # Right flank : GATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 200865-200510 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114146.1 Prevotella sp. C561 supercont1.8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 200864 47 100.0 30 ............................................... AGCACCGCTTGTTATAAAATAATCGACTAT 200787 47 100.0 30 ............................................... TATTTGCATATAGAATTATTTATTAATCAA 200710 47 100.0 30 ............................................... TACTGGAAAAAATAATAAACCTCTTTACGA 200633 47 100.0 30 ............................................... TTAAGTAATATGGGGCATGTTTGGTTCTCT 200556 47 95.7 0 ..................................G....T....... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 99.1 30 GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAAATCACAAC # Left flank : ATTACATTTTATAATGAGTGTGGAGCAAGTGAAAAGAACTTCGACATACAGAACAATGACTTTGGATGGTCACATTTGCCATTTTCCTTTATGGCTGAGAACATGGTTTTCATGATGGTTACTGCCATGCTGAAGAACTTCTATCTCTATCTCGTCCGTCATATCAGCGAAAAGGTCAAGCCGCTGAAAAAGACAAGCAGACTGAAAGCCTTTATCCTGCATTTTGTCAGCATACCAGCAAAATGGGTGAGAACGAGAAGGCAGAACGTTCTGAACCTATATACAAATAAAACATACTACTCTGAAGTATTCCTTGAATAAACAGTATTTCTTTGTGGCTATCATATCCCCCATTGGGTTTGGGTGGGGGGATTTTATGCCTATGCAAGAACCAAGAACCCCAGAAAATTCCCAAATCAATGGATAAATCCCAAAATGTCACGTCAATATATAAAAGTAGATCGCAAAGAATAATGCTGCGGAATTGAGGTAACTTTCCC # Right flank : AGAGGAATAATTCGATTTACGTAATTCAGTGTTGTGTGTATTCTAATGCAAGATATACATAAAATAACTAAAGTTTCCCACCCCTTCAAACACTGTTTTTTCTCATTTCCCTTTGCTTGTCGTCCCCCATATTCATTGACTTTTAACACATGACTAATAGAAGTTATGTAGTCTGCCCATATACTTCATCCCATTTTTTCAATGCTTCAGCCATTACAAGGATTTTGATCAACTCTTTGTCGTTGCCGCTGATCGTAGCCATAAGATGTTGGGGCGTCAACCCAAGTGTTTCTCCTAAAATACGAAGAATGCGTTCAATACAGGCAAGAACTCGCTTCCATAACGTGAGTGCCATGAGGTCGTCCTCCATATCCGAAAAGAGTTCGCCCATGGTTTGATATTCTGTGAATCTCTTTTCCAAAGCCATGACAGTATATGTAAGGTAACACAGCGTTGCGTCGGGTATCTGACCATTAAAGTCGCAACCTTGATAACCTCCT # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //