Array 1 3415-376 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904206.1 Porphyromonas levii DSM 23370 A3GGDRAFT_scaffold_100.101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3414 30 100.0 37 .............................. ATCGCTGAAGAGGTATTTGCCTATGTGAAGTCACAAG 3347 30 100.0 36 .............................. GAGATATCCGCACCTAACAAGATTATCCTCCTTGAC 3281 30 100.0 36 .............................. CTGAATTTAAGTGGCAGGAGATACACGACACGCAGA 3215 30 100.0 36 .............................. GAAAGAGATGAACGTTGCGAAGCCAACGGCGGAGAA 3149 30 100.0 34 .............................. ACTGGAGTAAGCTCATCATTCTCCCATTCTGCGT 3085 30 100.0 34 .............................. ACGTATACTTTGATGCTTTCAATCCTTCTATCTA 3021 30 100.0 35 .............................. ACGTTCAGGAGCTATGGTGAGAACGTGGTTGATTT 2956 30 100.0 35 .............................. TGGGTTTTGTGGAATGCCCTCCACCTGCCCATCGT 2891 30 100.0 36 .............................. ATTGTAAACCCTGAGGGTTATGCCATCCTATCAAAG 2825 30 100.0 36 .............................. TTTGGCGGTAATGTCGACCTCAACAGTGAGGGAGAC 2759 30 100.0 37 .............................. TTCGAATGGCACTCGAAAGGGCTGGAGAGCGTCCTTA 2692 30 100.0 36 .............................. GTTATCCAGGTGTAATCGCAATCTCTACGTGCGTCA 2626 30 100.0 35 .............................. TTGAAATCGTGCCGTCTCACTGACGCTCTTGGGGT 2561 30 100.0 36 .............................. CCATGTCCGACAACGCCTTGACGGCTTCGGGAGTTG 2495 30 100.0 35 .............................. TATACCCTGAGCTACTTGGTAAGCTAGACCTCGAA 2430 30 100.0 37 .............................. AGGACTCCTTTGACTGTCGTAACTGCTGGAGCTCAGC 2363 30 100.0 35 .............................. ATGCGAGTAGCATATTTTGAGTTACTTTTTTCATT 2298 30 100.0 35 .............................. CTAATCAAGCACGCATACCCCTCTCTCTTATACTC 2233 30 100.0 34 .............................. TGGAGACAAGCCAACAAACAAACTACTCGACAAA 2169 30 100.0 34 .............................. AGAAGTATAAGTGGTCACTGATTAAGGGTGCCGA 2105 30 100.0 34 .............................. TGCAGAGCGCAAGTTTAAGCTGGTGAGCTCAGAG 2041 30 100.0 37 .............................. GCTGGTAAAGCATATATCGGTATGTACGTTGACCACA 1974 30 100.0 36 .............................. AAACAAAGCAAATAAGTATAGGGCGGAGGAGAGCAA 1908 30 100.0 35 .............................. AGAGACGCGAGCGAGGATAAAAGTAGCAGTGACGT 1843 30 100.0 35 .............................. GTCCTTAGGTATGTCCTTATCATCAGCTTTGTACA 1778 30 100.0 35 .............................. GAATAATCAGGTCGGTAGGGTTAAATCCATTCGTT 1713 30 100.0 35 .............................. CGCTTCCCGTCGTATGGTCTGATAGCTCTACCTAC 1648 30 100.0 34 .............................. TTAGCTCATCTATTGACATTGTTGCTGGGAGATT 1584 30 100.0 35 .............................. TTGTGTCACCGTACTAGGGCTGCTTGCCGTAAGCT 1519 30 100.0 36 .............................. CACGAACAATGCGCAAGCATGGACTGAGCTCACGTT 1453 30 100.0 35 .............................. AGGACTACCCCGTGCAGTGGTGTGCGGTGTATGGA 1388 30 100.0 36 .............................. TTTTATCCTCTCGACTTGAGTTTTTGTTGTTGAAAA 1322 30 100.0 36 .............................. TTTACCCACTCTGTATCTATGTCCGCAAATGTTATA 1256 30 100.0 34 .............................. AGCTAGTAGCACAAGACAAATCAACTGGTAAACG 1192 30 100.0 34 .............................. TAGCCCTATTGCAGTACTTAGATTATCTACGAAC 1128 30 100.0 36 .............................. CCCTCAATAGCGGTCCGGAGTTGTATCGTGTTGGCA 1062 30 100.0 35 .............................. GAGGGAGGGACGTTAAATGCTGAATACTTGAGAGA 997 30 100.0 34 .............................. CTATTGTAGGTACATCTGCTATAGCTGCTTTCAT 933 30 100.0 36 .............................. CTTTAGCGTTTGGGTATATCTTCTTCATCTTGTTCT 867 30 100.0 37 .............................. CAAATACCTCCGTGGGTGGCTAAACAGGGTAAACGCA 800 30 100.0 36 .............................. CACCTCGAATTGGGATGAGGTCAATAGGTTTACAAG 734 30 100.0 37 .............................. GTGGTAAAACAAGTTAGCTATAGAAAGGTAAAATCTT 667 30 100.0 36 .............................. ATTGGTTATTACCACAGCAATTAGAATAGGACGGAG 601 30 100.0 34 .............................. TATAAATAGAGGATTTCTTTTGCCATGTTAGAGA 537 30 100.0 36 .............................. GTGTTGCGAGTTGCTCAATCCTCTCTAGCCTCTGTT 471 30 100.0 36 .............................. TGATGGAGGATGTGCAGGAGGATGCAGGCTGCACTC 405 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 47 30 100.0 35 CTGTTAATCGTACCATACTGGAATTGAAAC # Left flank : ATAATATTTTCATCAAGACAAGAGGGGTGGTTAGACAAAGAGATTATGGGAATTGAGAAAGCATCTACCGATAATTTCTTGTGAGTATTTTCCTATTTCGAATTACACGCCAATGCGTAAGGATGATAGAGATCATAGACATTTCGAAAACTAATAATATCTTTGTTTGGGTCGCATCAGACTAATAGATGTAAATCATGGTTAGCATTTTAGTGCTCTGTAGGACAGTTCCCATATCATACAATATGTGGTGCGCATAAATTGCTCTATAATGATGGGTTATTCTCTAAATGTCTGTCGATACTGGTGTTCACTAGTATTTTAGACGGTCTATGAAAATAGGAGGAATATTATGTTGTTGATAATCAGCAGAATGGAATGTTGTCGTAGGTGCACTCTTATTATACGATTAGGGTTCGATGACATCTTCCAAGCAAAAAGTGCCAAATAAATTTTCTAACAGACTTGTAACCAATGATATATTATAGTAAATTTGACGG # Right flank : CTATTCGTCATCATCACGCACCTTATGTTCGATAGTTCTGAGAGATGGGGGGATTTGAGAGAGGGGGAGTGGTCGAATTCTCTAGCGCGAGCGGGGAAATTTATCTCTAGCCTAGATTCCGCAAAGTGTGCTTTAGCCCCTGATTATTAGTAGGTGGCGCTATTGATAATTAAAGCCCTGTATTCAAGGAGAATACAGGGCTTATGTCCCTAATTTTTTGTATCTTTACGTTGCAAAAAAAAGTTGCAAAAAATTATAGAGGACTAGTTATGGCAAAGGTACAATTTATTAGCACAAATCGCAAGACTGCGATAGGGGGAGCTCAATTTTTCATCTCATATTGGGAGAAAATAGGCATGTCGGGACTGATTAATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTAATCGTACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //