Array 1 36259-33211 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJCI01000014.1 Legionella pneumophila strain 2531STDY5467348, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 36258 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 36187 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 36116 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 36043 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 35972 37 100.0 35 ..................................... CAATAACAAGCGAGCCTTTTGTACTAGAAGGTTTA 35900 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 35829 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 35758 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 35687 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 35615 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 35544 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 35473 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 35401 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 35331 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 35260 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 35192 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 35119 37 100.0 34 ..................................... GAATTTGTCGGCCGCATAGACCGCTTTTATCAAA 35048 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 34975 37 100.0 36 ..................................... TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG 34902 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 34830 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 34759 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 34687 37 100.0 34 ..................................... AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG 34616 37 100.0 37 ..................................... TTATAACATCGGGATGGCGGTTTATTGGTTAAGTAAC 34542 37 100.0 34 ..................................... TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG 34471 37 100.0 36 ..................................... TTTTTATCGTAAGCTTGATTAACTAGACATCTACTA 34398 37 100.0 33 ..................................... GTTTTAATTTAATCATTATTGCTTCCTTATTAA 34328 37 100.0 37 ..................................... TAAGATATTGGTCGATTGTTTGCAAGACGTCATCAAA 34254 37 100.0 34 ..................................... CTAAATCAGCAGTCATCAAAACCCATATGATTGT 34183 37 100.0 31 ..................................... TTCTCAGAATGGGAACGTTACACATCATATT 34115 37 100.0 34 ..................................... TTAAGTATACGTTTCTTTGGGCTATTAGTTCTAA 34044 37 100.0 36 ..................................... TTCTCATATTTTAAAACAATAGAGTAATTCATTTTA 33971 37 100.0 35 ..................................... AATCTTAATTTATGCGCCTTACCTTCTGCTTCATC 33899 37 100.0 36 ..................................... TATACTTAGACAATATCATCATTTCCTATGTTTCGA 33826 37 100.0 36 ..................................... GCTATTCCAGATAGGTAGTTGTTTAGAGCATTTTGT 33753 37 100.0 35 ..................................... TTCGATACTCCTTAGCGGTACTTGCTAAAGTAGTT 33681 37 100.0 35 ..................................... AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA 33609 37 100.0 36 ..................................... TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG 33536 37 100.0 33 ..................................... TTACTTCATGACCCGGACATTTTACTAAAAAAT 33466 37 97.3 34 T.................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 33395 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 33322 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 33247 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 43 37 99.6 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //