Array 1 1919871-1920472 **** Predicted by CRISPRDetect 2.4 *** >NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 1919871 36 100.0 34 .................................... TAGCATATTGAGTACTTTATTCATGTACTCGTTC 1919941 36 100.0 33 .................................... TCTTCGGCCACGATTATTTTGAACATGTTCATG 1920010 36 100.0 35 .................................... CCTTTCAAAACTTCCAGTTTCTTGCTCATCACTGA 1920081 36 100.0 37 .................................... CTGGTTACGAGCAGAACAACGTCATCGTAAAACCGGC 1920154 36 100.0 33 .................................... GTTGACTGAATTTCATGCGCACGGGAATGGCTT 1920223 36 97.2 35 ...................................A ACACAAACAGAAAATGCTGCCATGTTATTTCTCCT 1920294 36 100.0 34 .................................... AAGCGATAAGAGCAGTCATGAGACACCTCATTTG 1920364 36 100.0 37 .................................... CGAAAGGGTAATCACTTCACCGTTGGCTTTCTTCTCG 1920437 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 99.4 35 GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAACC # Left flank : GCCCGGCGCCGGGCCATGAAGGCCCTGGAGGCCTACGGCACCCGGGTGCAGCGCTCCGTGTTCGAGATCCACGTGCGCGGCGAGGCCCAGTTGCGTGATCTGCTCGCCCGCCTGCGCGAGGAACTGGCCGAGGAGGAAGGCGCCGACCTGCGCGCCTGGCGGCTCACCGAGGAAGGCCGCCGCCAGTCGGCCACCCTGTCCGGCGAGCCCCTCTCGCCCCTGCCTGCGGTGATCATCCTGTGACGATGCCTGGTGGCGCGATGCGATCCTCGGAGTCCGCAAGCCGTGGCGCTCGAGATTCTGCTCATGTTTTCAAAGGCTTCGAAACGGGTGGTGAAAACGCGCGTGAACGATTTGCCACCAAGGCAGTGGAATCAAGGGCTTGCGCGGTATTGAGGGAGCAACTCCGGCTGCAGCGGCGGGTCGATGCTTGCCCGCAGTGGGGGGCTCACCAGGAAGGCTTGCAGGCTGTTGATCCAACTGGAGAAAAAGGGCATGCT # Right flank : ACCCGAATAACGGGAAAGTCAATGATTATGAAAAGAAAAAAGGGGTCGGTGACAAACGAGAATCATTTCCTCGTGATACCGACCCCTTCGCGTCAACACTTTCACCTCTCTCCAGCTTCCTGCTAACCTCCCCAGTATCCACACTCACATGCGTGAAAGGACTCACCATGCCCCGCAAACCCAGGATGTACGTCCCAGGCGTGCCTTGCCACCTCGTTCAACGCGGCAATAATCGCGAAGCCACCTTCTTCTCTCCCGACGATTACCGCGTCTACCTCGATTGCCTCGCCCAGGCCGCCTCACGCTATCGTGTGCAAATTCATGCCTACGTGCTGATGACCAATCATGTCCACCTCCTGCTGACACCGCAGGACGAAGATGGGATATCGCGCCTGGTTCAATCCATCGGCCGGCGTTATGTGCAGTACGTCAATCACCTCTATCGCCGCACCGGTACGCTGTGGGAAGGCCGCCATAAGGCATGCCTTATCCAGGAGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAACC # Alternate repeat : GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAACA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 2573692-2578230 **** Predicted by CRISPRDetect 2.4 *** >NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2573692 36 100.0 37 .................................... GGGCGCCGGTGATCGGCACGCTAATCGTCTCGTTGTC 2573765 36 100.0 36 .................................... AAGGACACCGAGGGCTGCCCCGTCACTGCCACACTG 2573837 36 100.0 36 .................................... TTTGCAAAAATGCAACCCGGTGACAGTGTGTTCATT 2573909 36 100.0 36 .................................... AAGAGCTTTGATGAAGTCGTGATCCACCCCCGGTGT 2573981 36 100.0 36 .................................... TGATCGACGTGGACACGCTGGACCACCTTGTGGTGC 2574053 36 100.0 35 .................................... ACCGGTCTGCCCGTGCGTAACGAGCGCCGTAACAG 2574124 36 100.0 38 .................................... GCGGCGCCGAACTGGAGGCCATGGGCATTGTCCCCGTG 2574198 36 100.0 36 .................................... TCAGCAGCGGAACCAGCGTGGAACCGCTGTCCTCGC 2574270 36 100.0 37 .................................... GGGTCGTCGTCAGTAGTGCTCATCTCGATGCCGGCGC 2574343 36 100.0 36 .................................... GGCCGCAAGCCCGCACAGCAGGACCGGCCGGAACCT 2574415 36 100.0 36 .................................... GTACCGCTGCTCTGGATCGGCCCCGAGTCGGCCAAT 2574487 36 100.0 36 .................................... GTAGTGCCTGTCATGACGTTTGCGACGGGCGCACAA 2574559 36 100.0 35 .................................... AAGGATGCGGCACGCATTGACTGGCTGGCAGATCC 2574630 36 100.0 36 .................................... AGTGACGGTGAGTTCGTGGACGTGGGCGGTTCTGTC 2574702 36 100.0 38 .................................... GCTGCCGGGGGAGTGACGCCGATGCAGACACTGGAGCT 2574776 36 100.0 37 .................................... GCTGCTGTCGGAGATGCTGCGCACCGTGGCCTTTCAG 2574849 36 100.0 36 .................................... GCCTTGGTTTTCGCCGGCGGCTTGGCCTCGACGATC 2574921 36 100.0 37 .................................... TCCAGCGCCGGGTCGGCACCGACAGCTTGTTGCGCAG 2574994 36 100.0 37 .................................... CCGGTGAGACGAATGTCAAGAAAGCCGTGGCTGAGGC 2575067 36 100.0 35 .................................... GTCGTTCTTCTCGATGTCGCCTTCCCAGCATTCTC 2575138 36 100.0 38 .................................... ACCCGTTCGCCGGTTGTCAGAATCCGCCCCCGGTGCGG 2575212 36 100.0 36 .................................... GCGCTGGGCCCGGGTCTATGGCCCTGTCTGGTGCCC 2575284 36 100.0 37 .................................... AAGGCTGTTGAAACATCGCAGTCGTTAGGATCACTGC 2575357 36 100.0 38 .................................... ATGAGTAGTCAGTCCCTTGATAGATGAAACGGCGAAGA 2575431 36 100.0 38 .................................... GTGTCATCGTCCAGGAACTGGTCGTCGTTGGTGGTGCC 2575505 36 100.0 35 .................................... TCCAGGCAATCCGCCACCAGGACCATGGCAGCGCG 2575576 36 100.0 35 .................................... GGGAGGAGCCCGGGGCAGGTGTCCCGGGTGGACGA 2575647 36 100.0 35 .................................... GCCGGGCGCAGGGGGTTCCCCGACTACATGCTGAA 2575718 36 100.0 37 .................................... ACTCCCGCGGCATCAAGTACATCGACAAGGCTATCGG 2575791 36 100.0 38 .................................... CTGTCCTGGAAGTCGCTGGGCTTTGCAGCACCCTGGGT 2575865 36 100.0 38 .................................... GACACATGAAGAACCGTGCCGCAATGCTGGCAGGCTTC 2575939 36 100.0 37 .................................... GGCGCTCCAGCAGGCTGAAGCCGCCCAGCAGCAGGCC 2576012 36 100.0 39 .................................... CTACCAGCACGGCCCGGCTGGCTTTCAGGCTGCTGCAGT 2576087 36 100.0 35 .................................... AAGTTCATCAACGTGGTGGCCTTCTCCGGCTTCGG 2576158 36 100.0 35 .................................... GAGGCCCGAATGGTTACTTCTTGGCGAGATCTCCA 2576229 36 100.0 37 .................................... ATAACACCGATGTTCAGGTATTTTCCGGCAACTCCAA 2576302 36 100.0 37 .................................... ATGGGATGCCCTCGCGCATGAGATCAAAGCCAGGCTT 2576375 36 100.0 37 .................................... ATCTGGGTGCCAGGTGAGGGCCTGACCAAGCTGTGAG 2576448 36 100.0 36 .................................... GTTGTGAGACGCTGATAAAAACCAGTCAAGGCTGTT 2576520 36 100.0 36 .................................... GGAAAAGCACGGCGCTGAAGGCCGGCGGATCCTCGC 2576592 36 100.0 38 .................................... TAACCGCGCCCAGGAGGAGCTGTACGGGACTGCATGGG 2576666 36 100.0 37 .................................... ACCTGATCCGCGGGGTGATCGTGGCTCCGCCAGGGGA 2576739 36 100.0 36 .................................... ACGCCCGCCCCCTCAACCGGTGAGACGAATGTCAAG 2576811 36 100.0 35 .................................... GCCTTTGAGGGCGTCACCGAAGCCAGCGTCCTGGT 2576882 36 100.0 38 .................................... CTCCCATGGGTGGGAATCTCCCCCGTCTCCTGTGGCAG 2576956 36 100.0 37 .................................... TGCGGGTATTCGCTCGAAATCAACTCATGGTTCAGAG 2577029 36 100.0 37 .................................... GCTGCTGGTCACGCCGTGGATCGTTTAAGGGGGTGTT 2577102 36 100.0 40 .................................... ACCCCGCCGCCTCCCCCTGGCGCATTGCCGTCTCGATGCA 2577178 36 100.0 37 .................................... GCCGTCTGGCGATGATTCCGGCCGGTACCTTCAACCA 2577251 36 100.0 37 .................................... GGATATGGATCGGAGGACGTGGGCCTTTGCCCAGCTC 2577324 36 100.0 37 .................................... GGAAGAGTACCCGCACTCGGCGGCTAGGGAGCTCTGG 2577397 36 100.0 37 .................................... TGCCACCGTGCCCTCCCGCGCGAGGCCTTCCGCGACA 2577470 36 100.0 38 .................................... GCAGCTTCGCCCACTGGTGCTTGGGCTGGGCAAGCTGG 2577544 36 100.0 37 .................................... CTCATGAAAGAAGACCAGGACCAATGGCAACGAAGCA 2577617 36 100.0 37 .................................... TCCATCTCCGTGAACAGGGCATCGGGCACGTCCCAGG 2577690 36 100.0 38 .................................... ACCCCGGGCGCGTCCACGAACAGCTGGCACCTCACTGA 2577764 36 100.0 38 .................................... CGCGAGCTCCTTGCGCTCGGCCGGGGTCAGGTGGCGCT 2577838 36 100.0 35 .................................... GCGCCTATCCGGCGGCCGAGCTCAACCTGTCCCCT 2577909 36 100.0 36 .................................... GGTACCCTGCCAGACGCGGTTCACCTGCGTGGAGGG 2577981 36 100.0 35 .................................... CACGCATGTCATTCTTTCCTGTATCTGTAGGTTTC 2578052 36 100.0 35 .................................... GCGGGGAACTTGACCTGAACGCCCTGGCGCGCCGC 2578123 36 100.0 36 .................................... ATCCACTGGCGCGCCGCCCGCTCAGCCATGGAATAA 2578195 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 63 36 100.0 37 GCTTCAATGAGGCCGCGGCTAAATGCCGCGGATGAC # Left flank : GTGATATACCGAATCACATGCTATGCTGATTCCCCGCCAGTCGCGGCACACACCCGTGGTCGTACCACGAGGCGCCTCGGGCGTAGGGGTCGGGTCACGACTGGCCTCACCCCTAGTGTCCTGAGTCAGAGATTCGTTACATTTCAGCGGGCCTGTACGGGATGCGCGGCAAGGCGCACGAGCGAAGGACGGGCAGGCCCATTCGAGCGAGAGCAACGCGGCCGAGCGCCCGTACAGGCCCGCCCGCAGGGAGCCCCGCACAAGACCCAATGCGGCGTTGCGGACTCCATCCATGGAGTCCGCCCTTCGGGCCGGCCTGCGGCCATCCCCATCTGCTCCCGACAGATGGGTGCGGGCCTTGCCAAGGGCTTGCCATTGCCTGCGGCCCGCGCCTTGCCTTGGGTCTTGTGCGGGGCTCTGAAATGCAACGAATCTCTGACTCAGGACACTATGCCGCGGATGACATGGCTGCGGCAGAGAGATCGGCCAAGAGATTCGGC # Right flank : CGGCCCTCGCAGAAAAGTCGATGACACAAGGCCTGGAGGGCGGGTTTTCGAGCACCTTCAATTCAAACACGAATTCACGCATATCCGGCACTCCACTAAGTCCGACAATAAACCAATTTATCCCATATTTTCAAAGAGCTGGAGTCTTTCGAGCGCTGCCCGGGCTTGCCGGCATCAACCCAGCGCTCGAATCACTCCGGCGGCATGTCGATTAACACGTGCCGTGCCCGAAAGTTTAAATGATCACCGGTTCCCGAGCGACCGGTTCGAAATCCTTGCCCAGGCTTACAACCCTGGGCGCAACTTTCTCGGCAATACCTACGTCGAGGATCACGATGTGATCCTCATCATGATGAATCATGCCGTCCAGCAGCGCGATCAATTCTGCATGGCGCTGCCGGCTCATTCGACACTGGAACACTGATAATTGCAGCCACTCACCGTAACCACGCATGAGTCTGAACACACGGCGCCAGCGCTTCTGATCACTGATGTCGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCTAAATGCCGCGGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.70,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //