Array 1 671565-671832 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEEU01000003.1 Enterobacter kobei strain ECC1097 ECC1097_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 671565 28 100.0 32 ............................ CACTCGCGAGAATGAGCAAGGCGGCAGTCTAT 671625 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 671685 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 671745 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 671805 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGACCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : ATGTAGTTCGGCACAAACAATGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGAGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCTGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGC # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 686864-687313 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEEU01000003.1 Enterobacter kobei strain ECC1097 ECC1097_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 686864 28 100.0 32 ............................ CTATATGCTGCGCCGCCTCCGCTACGCTCAAA 686924 28 100.0 32 ............................ CGCCACGGTAACGGGAAGTTGCGCGCAGCGGC 686984 28 100.0 33 ............................ GAACTGGCGGGCGTGCCGCCGTCGTCTCTGAAA 687045 28 100.0 33 ............................ GCGAAGTACCGTGCTCTGGTGCGTGCTGATTGT 687106 28 100.0 32 ............................ TCAGTCCATTCTCCGCTACGGATTGCGTCACG 687166 28 100.0 32 ............................ ATAACGATGGTTGTACGGGATACCATCGATGG 687226 28 100.0 32 ............................ ATCGAAAGGAAACATCGACAACTGAGCGAAGT 687286 28 71.4 0 ...................A.ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCGGAAGAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTACTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACTTCACGCATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCCGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAGGGGCTGTCCCTTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCGTTGATTTATAATGTTTTTTTGCGTTGCAGAAAAAAGGGTTTTGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCT # Right flank : CAAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTCCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGTGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAAAAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCCGTTACACAAATGGCAATGCGGGAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 696801-698149 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEEU01000003.1 Enterobacter kobei strain ECC1097 ECC1097_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 696801 28 96.4 32 ..T......................... ACAATGTTTGCCAATACAAACAAAGTCGGCCA 696861 28 96.4 32 ..T......................... GTCCAGATGGCTTAAAACCAGTCGTTTTCTGG 696921 28 96.4 32 ..T......................... GTCGCGGTTTGGCAGCGCATCGCAGATATAGA 696981 28 96.4 32 ..T......................... TCCTCGAGCTTCTAATTCAAGAGTGGTATGTT 697041 28 96.4 32 ..T......................... AATGGCGAGCCCAGCAACTTCCGACGCTTCCA 697101 28 96.4 32 ..T......................... AACGCAGCTCTGCGCGCTCAAGTCCATCGCGG 697161 28 96.4 32 ..T......................... ACGAACTGCGCCCGGATCTGCACCCGACACCA 697221 28 96.4 32 ..T......................... GCTGCTCTCCATGTCTTTTGCGCGCCGCATGA 697281 28 96.4 32 ..T......................... ATTATGGCGAGAAAATCTCTGAATATTCGGTA 697341 28 96.4 32 ..T......................... GTTATTTGTGACGCCATTTTACTGGCCGCCGG 697401 28 100.0 32 ............................ AGTCTGCGATTTGTTTGAGTAACGCCACGTCA 697461 28 100.0 32 ............................ TGAATTAGCTGTTCTTTACTGAACCCCTGCTT 697521 28 100.0 32 ............................ ATTAGGTACTGCCAGTGCTCAGTCTGCTATGG 697581 28 100.0 32 ............................ AGCGACCGTAGAGATTGAGGGAAACCCTCCCG 697641 28 100.0 32 ............................ CTGGCGATTAGCTGATATAGATAAATTCAACT 697701 28 100.0 32 ............................ ATAATTATGCAGTAACCCCCTTAGTGCGCATA 697761 28 100.0 32 ............................ CGCTGAACTTCGCGTTCTGTTTTCACCAGTCC 697821 28 100.0 32 ............................ AAGCGGATTTTGAGGCTACCGGAAAAATCTAT 697881 28 100.0 32 ............................ GCCGCCGCACCGATATTACGAACAGCATGGAA 697941 28 100.0 32 ............................ TATCGTGCTGACTTTGAGGATTTGCCGACCAT 698001 28 100.0 32 ............................ ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 698061 28 100.0 32 ............................ TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 698121 28 89.3 0 C.C............C............ | C [698145] ========== ====== ====== ====== ============================ ================================ ================== 23 28 98.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGCCGGGCCACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTAGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTATGCAGGGGGTATAAGAAGAAGGGTGTTCGACCCTAATTTTTAGTGCGTTTGTAAGGCATTGATATTAAATGGGTATTTTGAGGGGGTAAAAAAGAGGGTAAACGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGGGGGGATATTATTTGA # Right flank : AATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //