Array 1 1317-2205 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXRV01000267.1 Staphylococcus arlettae strain SNUC 4202 contig267, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 1317 36 100.0 37 .................................... TGAAAGAACAAATCAAACAATTCGAAAGAGAACTTGA 1390 36 100.0 34 .................................... ATTTCTTTTCCTTGTACTGTTGTAATTTCTTTAT 1460 36 100.0 37 .................................... TCAGCCTCATACATCAACCCATAATCAAAGTATTTAT 1533 36 100.0 36 .................................... CCTTAATTGTTTTACATTGTATAAAATCATTTTCGC 1605 36 100.0 34 .................................... GCGGATTAGAAGAAAAACCATAGCCTACTGTTGG 1675 36 100.0 35 .................................... GCAATTCTATTTATTTCTTCATCAGTTCCAAAAAG 1746 36 100.0 34 .................................... CGAGTATCGTTTACGATTGTGTGGTCCCTATGAT 1816 36 100.0 36 .................................... TCAATTACATTGACTAACATGCTAGCCGGTTGGCTT 1888 36 100.0 35 .................................... TGAATTTCTATCATTTCATCTTTGTAAACATATTC 1959 36 100.0 35 .................................... CTCCAACCAGCCCAAGTACATTTCATAAATTGTGT 2030 36 100.0 35 .................................... CCCTGAAAAGTGCTACCAAAGTCTGCTGTTGTTAA 2101 36 100.0 35 .................................... TCTCATATGAATAACCACCTTTTAAATATTTAAGG 2172 34 88.9 0 ...........C..................-...G- | ========== ====== ====== ====== ==================================== ===================================== ================== 13 36 99.1 35 GATCGACAACTACCCCGAAGAATAGGGGACGAGAAC # Left flank : TTGATTAATCGATTTAATAATTCTAACGCAACATTTTTTTGTTTCAGTCATTCGACATCTTTTAAAAAGTCATCAGACAGGATTGGTAAATCGGGTTGTTCAAGGCCTAGAGTTTAATAAGTGTCAAGTCAATGAAATCTTCAGTTAATAGCGTATATTTGATTATTATTAGTTTAAACATATTAAAATTAAATACTTATCATATATGGCTTTTTTATTATTTTAATATAGAAGTATATTTTACTTTCCTGAACAGTAGTTATTAAATTTATCTTTTATTTTAAATTAGAAAGGAAGAAAAAGTTAAATTTATATTATGTTTTATATATGATTAATTATTAACGTATTAAATGTAGTATACTTTTAATATAAGGAAAATCATCATAGTATTTGTCAAAAAAAGTGACATTTTATATAATAGCATGGTGTTAGTTGTCACAATTTTTGACAGCAAAAATAATAATTGAACCCTTGTGGTTATGCTAATTATTAAAGTATCG # Right flank : | # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCGACAACTACCCCGAAGAATAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 836-152 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXRV01000354.1 Staphylococcus arlettae strain SNUC 4202 contig354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 835 36 100.0 35 .................................... ACATACTCATCAAATTGCTTAACTTGGCGTGCTAT 764 36 100.0 37 .................................... TTGACCGCTTCCCTTACCCTAATTCTATAATAACATC 691 36 100.0 34 .................................... GCTTCTAAAGATGCTATTGATTATAACCAAAGAG 621 36 100.0 37 .................................... TTTAAACTTTTCTTTACTTTGTTGCGATCCAGATAAA 548 36 100.0 37 .................................... TTCTACTCTAAAATGTCCCATCAATTCACTACCTAAA 475 36 100.0 37 .................................... GCTGTGATCTTGATTACATATTCATTGTTAATATAAT 402 36 100.0 37 .................................... CGTTTAACTGCTATTACACTGTGCATTTCAGGTACAT 329 36 100.0 35 .................................... CTTTAAATGCTTGTTTATATCTTTCTAATATTTGT 258 36 83.3 35 .A....C...C......T.A..G............. TCAAGGTCTGATTCAATTACTAAATATTCATCTTC 187 36 80.6 0 .A....C...C......T.A..G..........T.. | ========== ====== ====== ====== ==================================== ===================================== ================== 10 36 96.4 36 ATTCGATAACTACCCCGGAGAACAGGGGACGAGAAC # Left flank : CCCTTACCTTTTCTACAACTAACTCATTTTTTATTGAAGTTTGGTGAATTTTCTGGATCAGGTATGAAAACAAGCTTAGGCATGGGGAAATATAGTATAATATAACTAGAATATAGCTGAAATTTAGTTGTCAAAAAATGTGACATTCTGCACTTATAGTACAAGTGATTTGTCGCTATTTTTGACAGCAAATTTTGCCTTTGAACTATTGATGTGATAGGCTTTAAAGAGCTATC # Right flank : CCTCATCTTGATGATCTCAATTGGCTTGGTTCAAAAGAAATCGATAACCTCCGTAGAATAGAGAATAAGTATTAAAAATATATTTGATTTGACAAAATATTCTGCAAAAAAAGGGGAACAAAAAATCAAGATTTAAACTGTAATTCATTATC # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGATAACTACCCCGGAGAACAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //