Array 1 62234-61891 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNQ01000001.1 Actinomadura sp. LHW52907 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 62233 30 100.0 32 .............................. TTCGGCCACCAGCGCGGCCCGTTCGGCGTCGA 62171 30 96.7 31 .............................A GCCGCATCACGAGACCGCACGGCGAACGAGA 62110 30 100.0 31 .............................. GCAAAGCGATCCTCAACCGGGTTCACCCACC 62049 30 93.3 36 ............................AG GAATTTCTGACGGAGCGGTGGGACTACGGAGCCGGC 61983 30 93.3 32 ............................TG GTTCCCAGTCGAGGCTCCCATGTGGATCTGTG 61921 30 80.0 0 C.............T......T.....GAT | A [61895] ========== ====== ====== ====== ============================== ==================================== ================== 6 30 93.9 33 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : CCATGCCCGGAGCCTGCTGGGCCCTCTCTGAATCAAGCTTGACGACTAACGAACTGGACGGTGTCCCGACCGCCCGCCCACCGGCTGAGCGCCTACATGCAGCACACAAGATCGACGTAAAAGCTCCCCCTTCGACCCCGCCGCCGCACGACGGTTGGCGGACATCACCCAGACCGTGCTCTCCAGCATCGGCCAACCGGCCTGGAAGGCCGTACGCCAGAGGCAGCCACGGGATCGACGAGAACGGCCGTGATGCACTCGGTAGTGTGGGCAGGCGCTAGGGCGATGGGCATCAATGAGGCCGGACCATCACATGACCGAGGCCAAATGCGATCTTGCTGGTGTACAGCACCGTGGAAGTTCTCCACTGATTCCATCTTGGACACACTGTCGCTTCCGCCTCTTAAGTGCCAATATAACCAATATTGGGCTCGATGTCCGAATCAACAAAAGTGCTCCAAACCGCCCCTGTCTCGGTACAGATGCCCAGGTCAGGGAGA # Right flank : GCTCTGACGTACTTGCAAGGCGTGGTGGGTGGCGGCGGTTGCGGTTGGGTGGTGTCGTTTGCATCAGGATCGATTTGCTGACGCGCTGCACACTCGTCCGCGCGGTGGGGGAGCGAAGGCGGTTTGAGTGCTTATGGAAGGTTTGGTGCCTGTGGCTGGTAGTCGCTGGGGTTGCCACATGGCCGCGTCGAGTCCACCGCCTCACCACGGCATGGTCAGGCCGCCCGCTGCCTCGCATTCGTCGGGAGGCAATGACCCTGTTCCGTGCGGAGGGCACGAGAGGGCCGCTTGGGGGGACTCATTGCCATGTTCTTCGATCTCGGTACGCGGAGAGTGACCGTCGGGGCCAGGATGGTGTGCATGAAGAAAAGGCACCGCCGCACGCTGCTCGTCTTCTCCTGCACTTCGCTCGTCCTGTTTCCTTGCGCGTCCGTGGCTGCCGAAGTTCGTGAGACGGCCGAGGCGACCGAGGGGGCCGTTTCCGAGGAGGTGCGGTTGCC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6057-5427 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNQ01000002.1 Actinomadura sp. LHW52907 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 6056 30 100.0 37 .............................. ATTTCCCCAGCTGCGGCGGCGTCACGATGATCAGGCC 5989 30 100.0 37 .............................. AGGGAGAGTTCCGCGCAGAACGCGCGGATGATCTCAG 5922 30 100.0 37 .............................. ATCAGTTCCTGCCGGGTCTCCTTGCCTGTGATGCTGA 5855 30 100.0 37 .............................. GCGCTGCGATGGTCGGGCTGCTGGCGTTCGGGGCGAC 5788 30 100.0 39 .............................. CTCTTCTGGCCGTCCGGCGGCCCTCGATCGCCTGCCCCG 5719 30 100.0 34 .............................. GCGAAGGCAAGCGCGCCTACCCCGAGTACGTCAT 5655 30 100.0 36 .............................. GTGATGTGACCCCACAGCAGGGTCTGGGCGGTCAGT 5589 30 100.0 36 .............................. GACCGGGAGGCAACCCGGTCGAGGTCGGCCGCCAGA 5523 30 93.3 37 ..............G.......T....... GCGGCCACGCGCTCGCGGACCTGCCGATCGTGGGCAG 5456 30 93.3 0 ...............G......T....... | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 98.7 37 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : AGTGGCCTACGACGAACTCCTCTACCTCGACGCTCTGGCCCTAACCCGCCACTGCCTGGAGAACACCACCTACAAGCCCTTCCGAATCTGGTGGTGACCCCATGTACGTCGTGGTCGTCTACGACACCGCAGTCGAACGCAACCCCGTAATACTGCGCACGTGCCGCCAATACCTTCACCACGTCCAACGCAGCGTCTTCGAAGGACAACTAACCCCAGCCCAACTACGCCGCTTCAAAAACGCCGTCCACACCGCCCTCGACCTCACCTACGACAGCGTCATCGTCTACACCTTCCCACCCGGCACCACTCCCCAGCGCCTCGCCTGGGGAGCCACCGAACCCGAGCCCACCGACATCCTTTAACCTCGATCCTTGACACCTCCACAGCGCCAAACTTTCAGCGACACACCGGGCTCACCCGCACTACCGGAGGTCCACTGAAAACCACCCCAAAAACCCACTGACCCCACCACCTATGACCAGCAGCTTTATCGTGGG # Right flank : ACCGCAAGACGACCTCCGCCGATGAGCGGGAGGCGGGTCCTCATCGCCCCGCGACGACATCCTGGCCTTCGCCGCGTTCCCCGAGGCCGTCTGGCGCCAGATCTGGTCCAACAACCCTCAAGAGCGGCTGAACAAGGAGATCCGCCGCCGCACCGACGTGGTCGGCAACTTCCCCGACCGCACCGCCATCATCCGGCTCGTCGGCGCCGTACTGGCCGAGCAGAACGATGAATGGACCGAGCAACGCCGCTACATGGGAGTGGAACTGCTGGCCGCGTGTCAGAGAGTAGGCCAGAAACCGACACCAATGATGCCGACATGACAATTGAGGCAATAGGTGCTTAAGTAGCCGATAGATCACGAGGTGGCCTTCTTATACACCACCTGCTGGACGTAGCCGTTGGTGATGTGGATCGATATTAGTTTGAGCCGTTCTCTCTCCTTCTGACCGGGTGGAGCTGTAACGTTGCCGCAGTTGAGAGGAGTGCATGGTGGCCACA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 116561-115068 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNQ01000014.1 Actinomadura sp. LHW52907 scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 116560 29 100.0 32 ............................. TCGCACTCGGATGAGTGCAGGCGGTACCGCTC 116499 29 100.0 32 ............................. CGCACCGATCTCCACCGGCGCGGTACTGACCG 116438 29 100.0 32 ............................. GTGGCCGCGTAGTCCGGCCGGGCGATCGCCTC 116377 29 100.0 32 ............................. CTCGATGGGCCTCGGTCTCGGCGGGATCTGGA 116316 29 100.0 32 ............................. GACCGGCGTCACGTCCTGGCCATGGCTGATCA 116255 29 96.6 32 ............................T TCGGGTGGCGCGTCGGGTTCCGCGTTTCAGCA 116194 29 100.0 32 ............................. CAACTTGCGCAGGCCATCCTCAATGGAGATCC 116133 29 93.1 32 .........................G..C CCACGGCTGGCCGGATCTTGCCGCGCACGCTG 116072 29 100.0 32 ............................. CGGTCGACCCCCGTCCGCCGAGCGGGGAACGG 116011 29 100.0 32 ............................. GCCCTCCAGTTCGGCCATCGCCGCTTGGTGCT 115950 29 100.0 32 ............................. GCTCCATCGAGCCCTGACGACCACAGCGGCCC 115889 29 96.6 32 .....T....................... CATTCGTTCTAGCGCGAACGCCAACGGCGCGA 115828 29 100.0 32 ............................. TCGCGCGGCACGGTGAGGTAATGGCGCGGGCG 115767 29 100.0 32 ............................. AACAGGCAGGTACCCGCCTCGTCTGTGGCCAG 115706 29 100.0 32 ............................. GCAGGGTCCGCGGCTGGTGGGAGCGATACAAA 115645 29 100.0 32 ............................. CAGTTGGAGGACCTGGTGGATCATCCGGACGT 115584 29 100.0 32 ............................. ACGTTCCCGCCGAAATACAGGCGCTGATCAAC 115523 29 100.0 32 ............................. TCGATCAGCGCTTTGGCGAGCCCAACGATTGC 115462 29 100.0 32 ............................. TACGGCCACGAGGGCGCGGGGGCGGTCGTCGT 115401 29 100.0 32 ............................. CCGCCCACGGGGATCTGGCCGTGAGGGCCAAC 115340 29 100.0 32 ............................. CTGCTGGCTGGACGGCGCGGCGAACATCACGG 115279 29 96.6 32 ............................T TCACGGTGAACTGGATGTCCTGGTCTGTGGAC 115218 28 93.1 32 ...................A.-....... TAACCCGTGGCCTGCGCACCGGGAGGTACTAC 115158 29 100.0 32 ............................. CATCCGGGTGCGGCTGCCCCAGAGGCTGCCCG G [115136] 115096 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.0 32 CTGCTCCCCACGCCCGTGGGGGTGAACCG # Left flank : CGCACGCTGGCCAGTTACCAGCGGGCATGAACTACGCGGACACCGTTACACCCGGAGACGACCCATGGGAACAATGATCGTCCTCTCCACGACGGCCGTGCCCGACTACGTCCGCGGCTCCCTCACCCGCTGGCTCAGCGAACCGGCCCCCGGACTCTACGTCGGCACAGTCTCCGCCCGCGTTCGCGACAAACTCTGGGAGGCCGTTAGTGAAGCGGTTGGTGAAGGCGCTGCCGTCCTCGTCCACCCAGCGACGACCGAACAAGGCTTCACCATCCGAACCGCCGGAGAACGCCGCCGCCGGATCGCCGACTTCGACGGTCTCCAACTCGTCCGGTTCCTCCCCCAAGACACCGAAGACCCGACAGCCCCAACAGAACCGACATAGCCACCCGGCCCCGCGAACCAACACACCCATGACCAGACTCCCCAGGAACCAGGCACCCCGAGGAGGCAGCCACGAACTCCAAGTGCCTTTGTGAAACCGCAGGTCGCGAAGC # Right flank : TTGAGGACGACGGCCCACGTCGCGGCTGAGCCGTACCGGGTTTGGTGAAGTCCTTCAAGCCAGTCATGATCTTGGCTGGCAGGGAGGAGAATGACCGTCGATGTCGGCACCACGTAAGTACCCCCTGGAGCTCCGGGAGTGGGCTGTGCGGCTGGCTCTGGAGTCGGATCGGCCGATCGCGCAGATCGCTGCCGATCTGGGCATCCACCGCGAGGCGCTGCGCACCTGGGTCCGGCAGGCCCAGGCCGATGCGGGCCAGCGGTCCGAGCAGCTCAGCTCGGCTGAGCGTGAGGAGCTCAAGCGGCTGCGTAAGGAGAACAACGAACTCAAGCGGGCCAACGAGATCTTGAAGGCCGCCAGTACGTTTTTCGCCGCCGAGCTCGGCCAGCCCCGGACGAAGTAGTCGCGGTGGTCGATCACCTTCGCGGCCGCTTCGGGGTCGAGCCGGTGTGCAGGGTGCTGAACCTGTGCCCGGGCACCTACTACGGCCGCAAACGCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCACGCCCGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 125844-126845 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNQ01000014.1 Actinomadura sp. LHW52907 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================================================================== ================== 125844 29 96.6 32 ..............C.............. GACATAGTTCGGAGGATCTTCCCATGTGGACC 125905 29 96.6 32 ..............C.............. CCAGGAACTTGCCCACCTGGCCGGGGGTGATG 125966 29 96.6 32 ..............C.............. TGGTCGAGGACGTTGCCGGTGACACCGCCGGC 126027 29 96.6 32 ..............C.............. TCCTGTGGCGCTCGCGGCTCGCGGCGCATGAC 126088 29 96.6 32 ..............C.............. TGGCGGTAGTCCGGGCGCGGGAGCGTTACGAG 126149 29 96.6 32 ..............C.............. CCGCCAGTCAACCGAGGAGCGAGCGCGGGTCG 126210 29 96.6 32 ..............C.............. TACGACCAGCAGGTGCCCATCGCCGAGGTCGA 126271 28 96.6 32 .....................-....... CCGCTCAACATGGGCGGCGGGGGCCAGGTGCG 126331 29 100.0 32 ............................. GCCCTGGCTTAAACCTGGGTGGCCACTTCGCG 126392 29 100.0 32 ............................. GTCGGTGGGACGCGGCATTCGGTGACGACGGT 126453 29 100.0 32 ............................. CCGCTGAGTTCTTGAAGGTTGCGAACCGGTAT 126514 29 100.0 32 ............................. TCCGGGATGGCCCTGCTGATCTCGGGAATGAC 126575 29 100.0 32 ............................. CGACTCAAGGGGTCGGGAGTGGTACCTCCCGG 126636 29 100.0 32 ............................. CCGCCGCCCACCACGCCGCAGCCGCCAGCATC 126697 29 100.0 91 ............................. GTTCCTACGACGTCATCCGCGCCCAACGGTGCGTGGTACCCACGCCCGTGGGGACCACGAAAGGGCGTCTGCGGTGGTAGGCGACGGCCGC 126817 29 89.7 0 ...G..........C....A......... | ========== ====== ====== ====== ============================= =========================================================================================== ================== 16 29 97.7 36 GTGCTCCCCACGCCTGTGGGGGTGGTCCG # Left flank : AATCCGCTCCCCGGGAACATCCGGATACCCCACCAACTCGGGGAACGCGTCCTCCGCCAGAGCCTGGAAGGTAAAGGTGACCTTCCCAACGTCATGAAGCGCCGCCCAGAACATCAACACCCGCCGGGCACGCTCATCATCGACGCCGAGCCCCGCAGCGATGTGCCGCCGTCCGGCAGCACTGACATAGAGATCCCACAGCACACCCATCGCGGCAGCCGCATCTAAAAGATGACACACCACCGGATAGGGACCCGGCAGACCACGGCGCTTGCCCCACAGCGCCAGATCGACACCGGGAACCTCAAGCGGATTCCCCGTCATGACCTCATTCCCTCATAGCCCGTGACTCACGATAGACCGACCGTAGCGACGAGGACTGACAGTCCGGGGCCACCAGCCAAGAGTAAGCTCCACCCATGCGGCGGCAGACGGCGCAAGAGCCCAACAACACGAAACATAAACCCCATGCGCACTTGTGAAGCCGCAGGTCAAGAAGA # Right flank : GCGGACAGACCTCTGTGAGGCGAAGCAACCACCCGACGGCTGTAGTCAGTTCCTTATCGCTCTAAAGATGCCTGTATTGCCGACCCGGGCGTGCCTTGCCAGTTCGGTCATATCGGCGCCCACCCAGAACAGCCGCCCTCGACAACGCGGCGACGCTCATCGGCAGCCAGCTGGGCAACAGAAGCCGAAACGGCCCTGACGGCCTGATCTCCTGACTGCCGACGAGCAGCGACTCTAGATAGAACGCACTGCCGCGTTCGCACAACCATCTGGCCAGCTTTCCTCGCCCGCCAGCGAAGGCGGGAGCCACCCACGGTTAGCGCTGCACAAGTGGAACCGGTCGGAGTCGGTGTGATCCTCGCCCGCCGGTGAAGGCGGGCGCCACGGCAATTGAGCTAGTGATATTACACAGAGCTTTGACTCTGTCGCTCATTCGAAATGGACTGTAGTGTCCAAAACTACTTCGGAACCTCTCGGTGTTCCCGTGTGCACTAGAGGTT # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.30, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCACGCCTGTGGGGGTGGTCCG # Alternate repeat : GTGCTCCCCACGCCCGTGGGGGTGGTCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCCCGTGGGGGTGATCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 151797-151532 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVNQ01000014.1 Actinomadura sp. LHW52907 scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 151796 37 100.0 39 ..................................... CTCGTGCACCGCGAGGAGCGGGACGGGGGCGCCCGATGA 151720 37 100.0 37 ..................................... AACTTGTGTCAATTCGCTGGGGGCGACCTCCAGACCA 151646 37 100.0 41 ..................................... ATCCTCCCCGTCCTTGATGAGCCACTGCCGCGCCCGGTCGG 151568 37 97.3 0 ...................................G. | ========== ====== ====== ====== ===================================== ========================================= ================== 4 37 99.3 39 GTGGCGCCCGCCTTCGCTGGCGGGCGAGGATCGCAAC # Left flank : CCGTAGTAGGTACCCGGGCACAGGTCCAGGACCCGGCACACCGGCTCGACCCCGAAGCGGTCACGCAGGTGGTCGACCACCATGACTACTTCGTCCGGGGCTGGCCGAGCTCGGCGGCGAAAAGCGCGGAGGCCGCTTTGAGGATGTCGTTGGCGCGCTTGAGTTCGTTGTTCTCCTTGCGCAGCCGCTTGAGTTCCTCCCGCTCAGCGCTGGTGAGCTGCTCGGGGCGCTGGCCTGCGTCGGCCTGGGCTTGCCGGACCCAGGTGCGCAGCGCTTCGCGGTGGATGCCCAGATCGGCTGCGATCTGGGCGATGGGGCGGTCGGACTCCATGGCCAGCCGCACGGCCCGGTCCCGCAGTTCCTGGGGGTATTTGCGTGGTGCAGACATCGCAGTAATTCTCCTTCCAACCAGCCAAGATCACGCTGGCTTGAAGGACTTCACCGAACCCGGTGGGCTTCAACTGCGTGCGTGCGTCGTCGGTGGTGGGCGGGCGAAATCG # Right flank : AAGGTGGGGGAGGCGCAGAGCCTGGTCTCGTGATATCAAAGTCCGTCTGCAGGAGATCGACGATCTTGTGGGCTGGTGTTCTCCGAACCGTCTCCGCTGGTCATTGAGGAGGGCGCCCAACGGCCCGGCGGCGTGCCCGGGTCGCGGGGCCGGGTCGGCGCTGGTACACGGTCCGATCCACGGCTGCACCCAGACTTTCCATGGACGGCTTTGACTCGCGCAAGCGCCGCAGAGACACCGCCGTGCTGATCGACGCCCGACCAGGCAGCACGTCGAGGTGCTGACCGACCGCGAGGCCGACACCCTCGAAGCGTGGCCGCGCGCCCGCGGGCGTCCAGGTCTTAGGTCGGGGCGGTTCATTCCGCTCCGTGCTAGTCCGTTCGGAACCGCCGAGCTGGCAAGGAGCCGATGCGACCAGTTGGCGATAGGTCGTTCGCGACCTCCCGCCGAAGGTCGTGTGCGGTGTTTCAGTTGCCTCTTTCGGGTAAGGCACTCGATTG # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGCCCGCCTTCGCTGGCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //