Array 1 4043591-4042707 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020657.1 Klebsiella sp. M5al chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4043590 29 100.0 32 ............................. GTTCCAGTGATTCAGGATCTGGCCGATAGTTG 4043529 29 100.0 32 ............................. CTTGGCGATCCTGTTCGTGAGGTATTCGGAAG 4043468 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 4043407 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 4043346 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 4043285 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 4043224 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 4043163 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 4043102 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 4043041 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 4042980 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 4042918 29 100.0 32 ............................. CCGGTACCGCGCACGTCAAATACTGAAGATGG 4042857 29 100.0 32 ............................. CCTATGAAGTCAGCAACCTCGGACGGGTCCGC 4042796 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 4042735 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4734411-4732977 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020657.1 Klebsiella sp. M5al chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4734410 29 100.0 32 ............................. CAGCTGCGCATTGCTGGCGCCGGTCAGCGCGT 4734349 29 100.0 32 ............................. GGGCACGGTAGACGCGCCAGCAGGCAGCGCAG 4734288 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 4734227 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 4734166 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 4734105 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 4734044 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 4733983 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 4733922 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 4733861 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 4733800 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 4733739 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 4733677 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 4733616 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 4733555 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 4733494 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 4733433 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 4733372 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 4733311 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 4733250 29 100.0 32 ............................. CCTATAACCGACGAAGGCAAGCGCCGCGCACG 4733189 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 4733128 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 4733067 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 4733005 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.1 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //