Array 1 106948-107451 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPI01000006.1 Clostridium botulinum strain AM1295 AM1295_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================== ================== 106948 31 100.0 36 ............................... CAAATAGATCTGCTTTTATTCTTCCTGTATATCCTA 107015 31 100.0 33 ............................... TTTTAGGTATAAGTGACCCAATATTAGGCACGT 107079 31 100.0 35 ............................... TGCTATGCCGCAAGAGGTAGAGAAGGAAAAGCACC 107145 31 100.0 34 ............................... GGGAAAATAATCTCAGAGTTGCTTGTCCTGGTAG 107210 31 100.0 35 ............................... ACTATAACATTTAAAAGAGGAATAATTCTTAAAAT 107276 31 96.8 114 ..............................A GGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAAC 107421 31 87.1 0 A.......T......A..............A | ========== ====== ====== ====== =============================== ================================================================================================================== ================== 7 31 97.7 48 GTTGAACAATAACATGAGATGTATTTAAGCT # Left flank : GTATGACATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGTTCTGTGCCAGTTACTCCATCTCTAAATTCTACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATATGATTAGGTTAAGGAAGTTGTCATTTGGGTATCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAACCGACTCTAGTTCCAAAATCTATCTTAACCTTTGATATATAAGAGGTTAGGGGGTGCTTTTTATGTAAATTTCAAATTATTTAAAACGGTTGGAAAATTTTGTTTAGAACCTTGTAAAATCAATGGTTCTATGATATTCTTCAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGGGAAGGAGTTTCATTAAGTAATTATATACTTAGTATTTTAATACTAGATATAATACATAAGATTAAATATTAATATAGTATGTAATACATATAATGAAAATTATTAAAAGTCTTAGAAAAATCTAAGACTTTTATTTTATGCAAAATTTTAGAATTAAATATAACACTAGATTTAAAAATATTTAATGGAAGCAATAATATTTTCAAATTTAGTTTTTATAAAAATTAAGTAAAATAATTGGTTATATAACTAAAGAACTGTATGGTATAATATAGATAAAATTGTATAAAGAGGTGTATAAATGGAATTTTGGGAAGCAATTGTAACAGTCATGTTAAAAAAAGACATATATTTTGAAGATTGTGGATATATAATAGGGAAAAATATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAAGAAGTACATCCAAAGAAACAGTACA # Questionable array : NO Score: 4.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-1.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 128453-128812 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPI01000006.1 Clostridium botulinum strain AM1295 AM1295_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 128453 30 100.0 37 .............................. TACAAGACTATATTGATAAGCATTAAGGTATAATTTA 128520 30 100.0 36 .............................. AGTTTATCTCATTTATTGATGCGGATTTGATGAAAT 128586 30 93.3 36 ........G......A.............. TGAACTTATAATATATAATGTAATTAAAGGTTAAGA 128652 30 100.0 35 .............................. TCTTTAGCGTCTTGATCTATACCTATATATTTAAG 128717 30 96.7 36 ..................G........... CCAGTTAATTTATCTATAACCTTAAATACCATATAA 128783 30 90.0 0 ...............AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.7 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTCCTTAGAGGTAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATAATCTTAAAAATAAGGAATGGCTATTTTACTATGG # Right flank : CAAATTAAAATCCATGATTTTTTCCCTTTAAATTTATTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGCCATTTTAGACTTCCCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGACATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATAT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //