Array 1 1606108-1604884 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_012470.1 Streptococcus equi subsp. zooepidemicus, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
   1606107	    32	 100.0	    33	................................	CATAACCAATCGTTTTTTGACCGTCAATCATAT    	
   1606042	    32	 100.0	    33	................................	TTTGATGTAATCTGCGATATAAGCATCGTCTTT    	
   1605977	    32	 100.0	    33	................................	TTTGTTAAGGTGCTTGCTCTATTGCAAGATATC    	
   1605912	    32	 100.0	    33	................................	AGCTATTTTTTGCAAATTACAAGATTGATATTG    	
   1605847	    32	 100.0	    36	................................	CTCTTCTCGATTCTCTTAGTTGGTTTACTTGGAGCA 	
   1605779	    32	 100.0	    34	................................	CAAATCAAACATTGACGAACAGTCCAACCAACAT   	
   1605713	    32	 100.0	    33	................................	GTGTTCCGTTTGAAAAGCGAGTTTAGCTGCTTT    	
   1605648	    32	 100.0	    34	................................	TTTAGCCCTGTCGTTCCAACTACTTTTAAAGATA   	
   1605582	    32	 100.0	    35	................................	TCTGTTGGTAGGGTACAAACCCCAACGCTTTATAT  	
   1605515	    32	 100.0	    33	................................	CGATAATCCATTACCACCAAACTCAAACAGAGC    	
   1605450	    32	  90.6	    34	.........CA.A...................	GTGGGGTACTTGAATGAGCAATCTAGTATTATCG   	
   1605384	    32	  90.6	    34	.........CA.A...................	GACTTGATATGGATACCTTTATCCAAGTCCCCAG   	
   1605318	    32	  90.6	    35	.........CA.A...................	GGAGACGGTGGAAAAACGGCTTGCGTTGTAGGGAT  	
   1605251	    32	  90.6	    37	.........CA.A...................	TTGATGAAACAGGTGGAGAATTACTTCGAGGATGGGG	
   1605182	    32	  90.6	    34	.........CA.A...................	AAAAGATCAAATACATTCAATCAATGGTGGTCTC   	
   1605116	    32	  90.6	    35	.........CA.A...................	TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAG  	
   1605049	    32	 100.0	    35	................................	TTTGGCATGCCTCACATCAGACTCATGTCTAGCAT  	
   1604982	    32	 100.0	    35	................................	CCGACACTGCGAACTAATCATTTGTGACTCCTTTC  	
   1604915	    32	  90.6	     0	.........CA.A...................	|                                    	
==========	======	======	======	================================	=====================================	==================
        19	    32	  96.5	    34	GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT	                                     	       

# Left flank :   TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACACTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGCTAAAATAAGCTAAAAAATAGAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCA
# Right flank :  TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA

# Questionable array : NO	 Score: 9.08
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT
# Alternate repeat :   GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [9,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-7.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : NA
//