Array 1 15952-17091 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036455.1 Streptomonospora sp. M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 15952 30 100.0 31 .............................. CCGACCGCCGTGGATCTGGTCGTCTACGGCA 16013 30 100.0 31 .............................. GGCCGGCTGGAACAACAGGGAGTGGGACTGA 16074 30 100.0 31 .............................. AGTCGACGGGGACCATCACCGCGGTCGGGGT 16135 30 96.7 31 .............................T CCTGCACCGCCCCTTCGGCGATGCCGGTGAC 16196 30 96.7 31 .............................A AGCAGATCCGCGGGTGGGTGCGCGAGGAATT 16257 30 93.3 31 ............................TG GTCGCGAACTCGGTCCGGTTGTCGGCGAATC 16318 30 100.0 31 .............................. ACGAGGCGCTCGTCGACCTGCCGCGCGCCTG 16379 30 93.3 31 ............................TG TGTCGCGGACGTCGACCGTCGCGGGACTCTC 16440 30 96.7 31 .............................G TGGCGACGTGGTCGGTGATGCCGTCGGCGCG 16501 30 96.7 31 .............................T ACGAGAACTGGCCCGATTTGGTGTGGTCGTC 16562 30 96.7 31 .............................T CGTCGATGACGGCCAGGTCGAGCGCGTCGCT 16623 30 96.7 31 .............................A GATGGTCTTGGATGACCGGACGGTGCCTTCC 16684 30 96.7 31 .............................A GGGTCGGCGGAGACGACAAGCGCAGTTTCGA 16745 30 96.7 31 .............................A TGCTGGCCGAGGGAGAAGGAAAACAGGCCAT 16806 30 100.0 31 .............................. TCAGTCGCAGCGTCTACGGTTGCCATCAAGT 16867 30 96.7 31 ...............A.............. ATGAGAGCCTTCCGGCAAAACCTTGGCCGAA 16928 30 96.7 31 .............................A GCAGCCGCCGGAGACGGTGCTTGAGCGTCTG 16989 29 90.0 41 .......................-.A...G GGATTGAGTCCCGAGACCTCACCACCCACGCAGCTCCGCTT 17059 30 83.3 0 .A.......................G.GGG | TA,C [17063,17084] ========== ====== ====== ====== ============================== ========================================= ================== 19 30 96.2 32 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : GGCGAGTGGCAGCGAGCGGTAGGATGGTTTGGGCGTTGGCGCCGGGTGTCTCGGCCAGCCAGGCCTGCACGTGATCGCCGCCGGAGACGCCGGCGAAGTCCTCGGCGCCCGTGCGGCACACCGACACCACGGCGTCGACCTCCGGTTCTGCGTCGGCCAGTGCGAGGTTGCCCAGGATCACCCCCCCGCGTCGCGGGGATGGGCGGTGTGGCCGGGAACCGCGGCATCCTTGGGTCGGGGCTGGTGGTGGGCGGTGGGCCACCCGGTGGCGTCGGTTCCGAAGGCTCTGCCGATGCCCTGTGCTGCCAGGTCGCGGGCGCTGGGACCCGTTGCGGCGGATCCGTGAAGATCCGGTTAACACGGCGGCTGCGCCGAAGGAGGACCAGGCGCCCGAGCGCCGTCGTTTCGGGAGCCGATGAGGTTATATGAGTGTTTTGTCGAGTTTTCGGCGAGTGAAGGAAAACGGCCTTCGGAACTGATAAACGCGCAGGTCATTCACT # Right flank : GCCGGGGGCGTATAGCTCCTCCGGCCCCCGGGTTTGCGGGTCGTCAGAGCGCGAATTTTCCCGTTCTGCCTTCCTTGGGAGGTCTTATGCGGTTGACTTCTCCTATGGACTCCGAGGGCTCCCCCCTGCCCTGGCCCGGTGGGCTGTCCGCAGCCGCGCGTGCCGTGTGGGCCAAACACGATCACGACTCCGACGGCTGGTTGCCGCTGTGGCGGCATATGGCCGACAGTGCCGCCGTTGCGGAGCGGCTGTGGGATGAATGGGTTCCCGACCAGGTCCGCCGACTGGTGTCGGCCGAACTTCCCGGCGACGCCGATGACGCGCGCCGACTGGCGACGTGGCTGGCCGCGGTCCACGACATCGGCAAGGCGACGCCGGCCTTCGCCTGCCAGGTCGAAGGCCTCGCCGACCGGATGCGCAGCGAAGGTCTGGAGATGCCGCTGCAGAAGCAGATCCCCGATCGCCGCCTCGCCCCGCACGGGTTGGCCGGGCAGTTGCTG # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26435-30499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036455.1 Streptomonospora sp. M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 26435 30 96.7 31 .............................G TCTCAAAGGGCAACCGAGCACAAGGCGAACA 26496 30 100.0 31 .............................. TCGGAGAGCAGCGAGCGGAAGTTCTTCCGCG 26557 30 96.7 31 .............................A CGAGCGCGCTGCCGCCCGCACCCGGCCTGGC 26618 30 96.7 31 .............................T CGGCGAGCAGCCATGCCCGGTAGGCGTCGGC 26679 30 96.7 32 .............................T GACCACGATCATGTCGAGCGTGCTGTGCTGCG 26741 30 96.7 31 .............................G CGGTGACGCGCACCTGGAATCCGAGCTGCGG 26802 30 96.7 31 .............................G AAAGGCCCTGGTCCGGGAGAACCAGGGCCTT 26863 30 96.7 31 .............................G CCGTCGATCAGACCCTGAATGATGTTCTTCC 26924 30 96.7 31 .............................G ACGGAGCGTTACACGCACGTGGCCTCACCGC 26985 30 93.3 31 ............................AT GATGTTCTTCCCGGCGTTGACCAGGAAGTTC 27046 30 96.7 33 ............................A. ACGTGGTCGTCTCGGCCTCCGGCGGGTTGCGGG 27109 30 96.7 31 .............................A GGCGGCCACGGGGCCGCCGGAAACGGAGAGA 27170 30 96.7 32 .............................A GTTTCCTGATCAGGCGCTTGAACTCTTCGTCG 27232 30 96.7 31 .............................A ACTGCTGCTCATCGGCTGAGCGCAACGCTTC 27293 30 96.7 31 .............................T TCGTTCCGTCGATCGTCTGGGTGATCATGCT 27354 30 96.7 31 .............................G CCGCAGGCATCACTGCCGAGTCGGTGTGGGG 27415 30 100.0 33 .............................. GTGAGATCCGCAAGCTGGAAGAGCACCTGTGGT 27478 30 96.7 31 .............................G GCCTGATCGACACCATGACCATCGGGCACCT 27539 30 93.3 31 .......T.....................T GGTGCCCTACCTGCTCGCGCTGGTGCGCGAC 27600 30 96.7 31 .............................G ACTCCGACGTGACCACCATCGACCTGCCCAG 27661 30 100.0 31 .............................. GACCCGGGGCCGCCCCGCCCAGGGCGGCCCC 27722 30 96.7 31 .............................T CCCACCCGGTGCGGATCGCCGGAACCCCCCA 27783 30 100.0 31 .............................. CGCTGGTCTTCAGCCGCGCGCTGTTCTCCAG 27844 30 100.0 31 .............................. CCTGAGCCACCCACGGACACCCGAGCCACCC 27905 30 100.0 31 .............................. GGGGCAGTGCCGCGTTTCGTCGTCGGCGTAC 27966 30 100.0 31 .............................. GGTACACGCGGCGCACCAACACGTAGTTGAC 28027 30 96.7 31 .............................G CGCCGGACCCCACCGTCACGGCGCCGCCGGG 28088 30 96.7 31 .............................G CCTCCCCGTCGTCGGCCGGGGGCGACGGCAG 28149 30 96.7 31 .............................A GGAGACCGCCCGCGATCAGCAGGTGTGGCAG 28210 30 100.0 31 .............................. CGTGGCCGCGCAGCACGTGCAGCACCTCCCC 28271 30 96.7 31 .............................G GCACCGCGACAACACCGAAGGAGCCGCGCGA 28332 30 100.0 31 .............................. GGCCGGCGACCGCGGCCGCCACCCGGACCCC 28393 30 96.7 32 .............................A TCTGCTTGAAGTTCTCATCGGCCCCGGTGAGG 28455 30 96.7 31 .............................A ACGCCGGGAACCAACCGAGCATCCGGCCCGG 28516 30 100.0 31 .............................. ACGAGCGCACCGTCGCGCCGATCGTGGAGGT 28577 30 100.0 31 .............................. ACGAGCGCACCGTCGCGCCGATCGTGGAGGT 28638 30 96.7 31 ............................T. ACCGCCGGTGTCCGGGGTGTCCGGGGTCTGG 28699 30 96.7 31 ............................T. CGTACAGCCCATCATGGGACCGATCCGGTTT 28760 30 96.7 31 .............................T GCTGGCTCTTGCAGGCGTCCAGAGCGTGGCG 28821 30 96.7 31 .............................G ATCCGCGCGCTCTACGACGTGGCCTGCACCG 28882 30 100.0 31 .............................. AACACCAGGGGAAGTCCATGAGCCGTATCCA 28943 30 96.7 31 .............................G AACCGCTGTCGCACCCGCTGATCGACCCCGC 29004 30 96.7 31 .............................G CCGAAGCCGCCGGATGGGAAGTCGATCTCGA 29065 30 100.0 31 .............................. GCTCCTCCGAAGCCCAAGCCCTCTACGAACA 29126 30 96.7 31 .............................G TCCAGCACTTCGCCGCCGCCGGAGCTGAGAC 29187 30 100.0 31 .............................. GGCCGCGAGGTTGCCGACGGAGCGGCCGAGG 29248 30 96.7 31 .............................G TTCGCTGGGTCTCGGAGGGGCCGCGCAGGGT 29309 30 100.0 31 .............................. GCCTGGGTCGGTTCTGCGACCAGGCGGTTGC 29370 30 96.7 31 .............................T GGCGGCAGGCCACCGAGGATGACCACTCGTG 29431 30 100.0 31 .............................. CCATGGGCGAGGTGCCCATGGTCGAGCTGCC 29492 30 96.7 31 .............................G CGGAGGGGCAGGCAAACGGAATCGATCCGAT 29553 30 100.0 31 .............................. CCATCACCGCGCCGGGGGAGGCGGGCAGCCC 29614 30 100.0 32 .............................. CCGTCCGCTTACCCGCACCGGTGAGCCCGCCC 29676 30 100.0 31 .............................. CGGTGATGTCCTCCACCTGCTGGGCGCGTGC 29737 30 96.7 31 .............................G CCGGCACGACGACCTTGCGCCACAGCCAGAG 29798 30 96.7 32 .............................G AGGCGAACTTGCGGCCAAGCGAACAGGACGTT 29860 30 96.7 31 .............................G CCACCGACACGACCCGCTCGGCGTCGTCGTC 29921 30 100.0 31 .............................. GGCATCGCCGAGGAGGGCGACGGGCAGGCGG 29982 30 100.0 31 .............................. CCGACGCGCGGGCGCTCTATCGCGTGTCCAA 30043 30 96.7 31 .............................A GCGGCCGGTATGACGCACCTACGCGACGTCA 30104 30 100.0 31 .............................. GCACGTCCGGGCTGGACTCCAGCGTGCGGGT 30165 30 100.0 31 .............................. GCACGTCCGGGCTGGACTCCAGCGTGCGGGT 30226 30 96.7 31 .............................T CGCCCTGGACTCCGCGGATCACGTAGTCGCC 30287 30 96.7 31 .............................T CGCCCTGGACTCCGCGGATCACGTAGTCGCC 30348 30 100.0 31 .............................. GCAACCGCACCGCACCCGCCAGGACTGCCGC 30409 30 96.7 31 .............................G TCACGGCGGACGCGAAATCGACCGAACCGCC 30470 30 86.7 0 .............T......T.C.....A. | ========== ====== ====== ====== ============================== ================================= ================== 67 30 97.6 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : CAGACCGACCGCGGCGGCGACGTGGAATCCGGACGCAACTACGCCGACGGAGTCATCTGGTGACGGTCATCGTCCTCACCAACTGCCCGGCCGGTCTTCGCGGGTTCCTCACCCGCTGGCTGCTGGAGATATCGCCCGGGGTCTTCATCGGCGGCCCCTCCGCACGGATCCGCGACATCCTGTGGGCCGAAGTGCGGGAGTACGCCGGCAACGGGCGTGCGCTGCTCGCCTACAGCACCGACAACGAGCAGGGCTACACGTTCGAGACCTTCGACCACAAATGGCACCCGGTCGACCACGAAGGCCTGACCCTGATCCGGCGCCCCAGCGAGGAAGCGGCCATCCCGCCGGCGTCCGCGCCCAAGGGGTGGAGCAAGGCGTCCAAACGCCGCCGTTTCGGGAACCGGTGAGGCCGCATGGGTAGTATGGGTTTTTTGTCGGATTCTCGTGGAGTGAATGGAAACGGCCTTCGACGCTGGTAAACCTGCAGGCCATTCAGT # Right flank : CCGGAGGCGCTGCCGATCCACCAAGTTGTTCGCGGGCTACTGCGGTGCCCGACGGAGCTTCAGGTGCGCCAGCCGTCGTGCTTCGGCATCCAGGTGCCAACAAGCGGGCACCACAGCGGTTTCCCACTGCGGGCCCGGAGTCGGCAAACTCGATACCTGGTCAGCTGACGCTTCGTGCGGAGTCTATGCCCGAGGGGGTGGAGCTAGGGTTTCCGGGCCACCGCACCGTACCCGTCGACCTCGGGAGGTGTGCCGAAGACGTTTGGTTCGGGGCGCCACTGGGTGATCGAGACCAGGCCCGGATCGACCGGATCCAAGCCCTCGAAGAACCCGCCGATCTCCTGTGGGCTGCGTTGGAGGTAGGGGACCGCCCCGCTTTCGTTGTACTGCTCCTGGGCTGCTGCTCCGCCTTCGCTGACGACATTGGTGCCGTCGTTGATGACGAGGTAACTGCCCGGCGGCAGGGCGGCCACGAGCCGCTGCACGATGGAACGGGCTTC # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //