Array 1 152750-153070 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMER01000006.1 Rhodococcus fascians GIC36 contig7, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    152750	    27	  96.4	    33	....-.......................	CGCTCGCAGCCCAGGTGAGCGCTTTGTTGACGT	
    152810	    28	  96.4	    33	..............A.............	TCCGAGCAGTGCGGCCAACGCGTCTACCTCTGA	
    152871	    28	 100.0	    33	............................	CGCGTCCTTGACGGTGAGTGCGTGGCCTTTGTG	
    152932	    28	  96.4	    33	.........................G..	CTGGCTGGTGGACAACGGTTTTGGCGACGCACC	
    152993	    28	  82.1	    21	..............T.......CT.T.G	GACGGGATTGAACTCTGTTCG            	Deletion [153042]
    153042	    28	  67.9	     0	A...........A.T.T.....CAG.AT	|                                	T [153050]
==========	======	======	======	============================	=================================	==================
         6	    28	  89.9	    31	GTCCGCCCCGCACACGCGGGGATCAACC	                                 	       

# Left flank :   CCGGTGTACTTCACACCAGCATCGACCAACGCCGCCGAAATCCACCGCTGGCGGGGACTGTCGCATTTCAGCTCACTGCCGCCCCGACCAAATCGGTTCCCTCCGCCCCACGTACCGACACCGCGCCCCGCGCACGGGGCAAGAAGATCCCCCTCCCCAGTGCGGAACGCGATGCCTGGGGACGAAAGATGCTGGCGGCCGGCGGACTCGACGTCGAAAGCCTCACCGTCCACGCGGGACCGCGACTCGACAGCGCCATCAAATCCTTACCCCGAGCCCACAGGGCAACACCGAAGGCCGTGTTCGCACACACCACCGTTGTGTACACAGGTACAGCGCACATCATGGACGCAGAACCCCACATCGCTGCGCTCACCCACGGCGTGGGATCCGCGAAGGCCTACGGGTGCGGACTCTTGCTCACCAGATCGGTATGACACGGCATTCGGGTACCGAACGAACCGCGAACCCATCTCCTGCAACTCGCCTGGTCAGAAAGT
# Right flank :  TCCAGTGCTCTCTGCTTGGCGATGTCGAGTCCCGGCCGCAGCCGGCTCTCGCCGTTCCGGGAACCGGGCACATCAGCGGCACAGCCGCTGCCAGGAACGCTTACGGCAGTACCAGCACGACCTCCCCTGACCGGCAGCTGCCCTCTCCTTTCTCGCCGGCTGACCCTTCGCCTACGAACAGGTCCCTCATGACACACAACTCACGTACAACCGCGCCTTCTCTACGCCGCGACCTTGTCGCCATCAACCTCGCCTTGATCGTCGCGGCTCTCGTCTTCGGCGTCGGCCACATACCTGGCGTGGTGAACTCAGCGACCCTGATCGCGGTCGGATCGAGCCTGTGGGCTGCATTCAAACTGGTCTCCGTCGTCCGCCGGCTACTGAACCCCATCGCAACCCCGGCCGAGACGGAACCGATCGACATCGTCCGCACGTCCACGCCGCACAGGATTCCAGCAATCCGGTTGGTCGCTGACGTATCTCGTCACGCCAGCTAGATT

# Questionable array : NO	 Score: 3.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:-0.17, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCGCCCCGCACACGCGGGGATCAACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [3,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCCTCCCCGCACACGCGGGGCTGTTCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [2-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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