Array 1 1731-657 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFJB01000001.1 Deferribacter autotrophicus strain SL50 Ga0300908_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1730 29 93.1 36 A.....G...................... GCTGCAAAGCCGCCGCCAAAATTGACAATATCCGAG T,C,A [1720,1724,1727] 1662 29 100.0 36 ............................. TCATCGCATCCTGCACCCTGCACAACTGGCAGAGTG 1597 29 100.0 37 ............................. TGTCTTTACCCTGCTTTTTTAAAACAGGGTCAGGATT 1531 29 100.0 36 ............................. CTGCGGTATTTGAACTTGAGTGCTCAAGAGCAGTTG 1466 29 100.0 36 ............................. TCGTGGATGATACCGAAAAGCGAATTAGTGCGATTA 1401 29 100.0 36 ............................. CTCAATCTTATTTGAAAAAAGTAATTCTATGATATT 1336 29 100.0 36 ............................. GCTCTCTTTATCAACATTGTAGTTTTCCGCATCTTC 1271 29 100.0 36 ............................. TTTGCCTTTTGTGCCAGCTATACTAAAGCCACCGCA 1206 29 100.0 36 ............................. GTGAAACTCATGCACCAGTGCAGCAAACAGCCACAC 1141 29 100.0 36 ............................. AACTGGCTGATTGTGAGATTAGGATTGATAGTTTTG 1076 29 100.0 36 ............................. TAGGTCACAATCTTGTCCTTTTGTCAGCCATTTTGA 1011 29 100.0 37 ............................. CTACACCTCTCATTTTGTCTGGAAGAGGACATTCATC 945 29 100.0 36 ............................. GATTTAGTAGTATTTCCTGCAAAACCAAGTTGGTTG 880 29 100.0 36 ............................. TGCTTATTTCGGCATCAAAAGTGCTGAGGCTTCCAA 815 29 100.0 36 ............................. CTTCACTCCTCACATCTTTATTTAAACAAAATCCAA 750 29 100.0 36 ............................. AGGGTCTCCAAAGTAATAAGGGTCAAATATAAATTT 685 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 17 29 99.6 36 CTTTATATCCCATAATTGGTTACTAAAAC # Left flank : ATGGTAACTATTTCTAAAACAAAGAAAACCCATTCTGCAGCCCATCCCCAAACGAAATTATGGATTAAGGCAGATGTTCCTGCAGGGGAGACCAAAGCAATAGTAAACCAGATACCAACACCTGTCAGTGCTCCTAAAACAGCAGAAATCAGTAAAACAAGTGCGCTAGTTTTTTTTACGAAAATTTTTAGCTCTTCATTCTGCTCTTTTAAAGCTTTTTTTTCAGCTAATACTAAAAATAATCCCATACCTACAGCAAAATGCGAAATAAAAACATGAAATATTGAAACAAGGGCAATGACTAAGGCTCCAGAAATGTCACTATTAGCCAGCCAAAGGGGATAATCCATAAACCACCTCCAATAAAATCTTAGACACTTTTATTATAACAAATATAATTGAAAAATTAAATTAATATAGAATGATTATAAAACAGACAGTCTGAATTTTATAATTATGGCTAAATTTTTATGTTTTAGTTAACTTGTTGTGTTTTAAGA # Right flank : CCATTATATATAGAACAAAAAAATTGTTATTTACCTATCACTTACAGTTATTCACCTGTCAAACAACATGCAAAAAATTCTCGAACCTCCAGTAGTGCATTTTATATCAAATTGTCAGTTGGATCAAAATCTATGCCAACAGTTTCCCTTTCTATATTATTTTTGTTAGCAATTTTATAAAATACAACATAATCCGTTTCATGGTTTATTAATCTATTAGCAGCCTTTTTCAATGCAAAAAATTTTGCTTCGCTCAATTCCCCTTCAAATACCGATTTTTGAGTATGATGAAGATATTGCCTAAAAAGCTTCATAATTTTAGTAAGCCGTTTTTGACCTTCTGATGTGATTGTTGAAATGTCATACACAGCTACCACATACATATTACCACCATATCCTAAAACTTTTATATTTTTGTTCACCAAGCAAATGTTTTATCAATTTGTATAGTTCCAGTTTTATCAGCTTTCTAAAACTAACTTTTCTTTTCAATTGCTTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATCCCATAATTGGTTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 27605-27339 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFJB01000008.1 Deferribacter autotrophicus strain SL50 Ga0300908_108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =============================================== ================== 27604 33 100.0 44 ................................. CTTCAAGCATCATTTCCATGCTAAGTTCTAAAGCAAGTTCTGTC 27527 33 97.0 47 ...............A................. GTAATTACTGCAAACCATTGCTAAAAATCTTATATCTTCTATCGGTC 27447 33 100.0 43 ................................. AGTATGCGGATCATGACCACAAAAGTCTGGTGACATTCTTGTC 27371 33 81.8 0 ......T........A............AG.TA | ========== ====== ====== ====== ================================= =============================================== ================== 4 33 94.7 45 AGAATTGGTTACCCTGTTCGAAGGGATTGCGAC # Left flank : GATGATCTAATGAAACATTTACAGGAAAAAGGTTACAGTGTAGCAAGTAATACACTAAAAAATTTTTGGTATAGGCATTTTATTAGTAAAAAAATTTAATGAGTTGTTGATTTCATAAAATATGTTATAATTAATGTAATGTTGTTTGACAATTGAATATTTTTTTGTGATGAGATGATTAAAATTTAGGCAAAAATTGTATAATTGGTGGATGAATAGGATAATAGGAAGCATGACAATTATATAAAGTTTTTATTTAACAAATAGTTGTGCAATTTTTTAAAGTTCTCCAATGATGTTTAGATTGAAAGTAAAAGTTTAGGATTATCAGAAAGTTATCGATGGTTTATTTATTGTGAACACGAAAATTTTTGTTATTTATTGTCAATAAGTTATAAGATAGGGTGCTTTTAAAAGATAGGTAGCGAAAAATAAAACGGAGAACTTTAAAAATAGGTTGCTAACATATTGATAATTTGGTATTTAGTAAATATACTGTT # Right flank : TGTTTGAGAGGAAAGTCTTGAAATTTGTTAAAAAAAGTACCCTGGTCAATTTTTATTGACTCTAATGAAAATTTTCGCTAAATTATAAGTAACAGATGAAAATTATAGACAAACAGTTATATACTTAAAAAGTGCCCCTTGCAACGTCCTGCTAATTAAAAGAAGCAGGGCCGACCAAGGGGCTTTACTTTTTGGAGAAAAATAATGTTTATTCGAAAAGTAGCTTTTGTAATTGATGGCTGGTTTATGTACAAAAGAATACAATCATTAAAATTATTTTATTACAATGGAGAAAACATTAGGAACTACTGTAAAAAATTATTACGAATGAATGATTATTTATATAGAATTTATTATTATGATACTTTACCTTTGAATAAAAAAGGTGAACATCCTTTAACGAAAAAAAGTATTGATTTTTCAAAAACTGAACAAGCTAAAAAACAAACAGAATTATTAGAATCAATAAAAAAGACACCACTATTTGCTCTTAGACTTGG # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAATTGGTTACCCTGTTCGAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //