Array 1 18283-14906 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWHL01000017.1 Methanocalculus chunghsingensis strain K1F9705b K1F9705b_contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 18282 37 100.0 38 ..................................... ACCTAATAACCATGAACGAACCACGCCGAGAGTATATA 18207 37 100.0 38 ..................................... ATCTCCATATCACCCTATGATATCATGGGATGAACCGC 18132 37 100.0 37 ..................................... AGTATGTGGGTCTGGGATGGCCAGATCCATATCTCGC 18058 37 100.0 36 ..................................... CGTATCATAATTCATCAAATCACATCTCCGTGTATG 17985 37 100.0 39 ..................................... GACTCGTTCTCCTGCTGTAATTCTTCCGTTGTCATTGCG 17909 37 100.0 35 ..................................... TGGTTTTTGGGGAAAATTGGACAAATTGGATAATT 17837 37 100.0 35 ..................................... GGAGAAATGAACACTTCAAAAAAATCTTCATACTT 17765 37 100.0 38 ..................................... ATAGACATACTCTGAGCATAGTTTTATTTTGTTCGATA 17690 37 100.0 36 ..................................... CTTGGTCAGCGAACTGCGCTGACCAGGCAACCCGGG 17617 37 100.0 38 ..................................... TCGGGGGCGTCGGTGAGAGTGATCATCCCTTCACCGAT 17542 37 100.0 36 ..................................... CACAGTATTCGTTCGACTCTGGTTCCTTGAATCCAC 17469 37 100.0 39 ..................................... CAGTTCAGCATCCCCCGGCAACCACCCCGGCGAGGGGGT 17393 37 100.0 39 ..................................... ATGCCGAGGAGGACGGCAATGGGTTGGAGGAGGTCAATC 17317 37 100.0 37 ..................................... AGATTTGCACCGCTGAGATCCGCATCGCTGAGATTTG 17243 37 100.0 38 ..................................... AGCCTCAAGATCAATTACTACGGGCGCAGGAGCCCCGC 17168 37 100.0 38 ..................................... CGTCATAGCTATGTTCGATGTTATCGGACATGAGTATC 17093 37 100.0 39 ..................................... ACCCAGGGCACGTTCACCGACGCCGGCAGCTGGTCGGTA 17017 37 100.0 36 ..................................... AGAATGCGAAACCGTAGGGGTCTACGACTCCTACAA 16944 37 100.0 39 ..................................... ACCTCTGTTATGGGTAATGGGTGGCTGCTGGGCTGTACG 16868 37 100.0 38 ..................................... AGTACTTTTAATGGTTCCATTGTTGTCCATCCTCCCGC 16793 37 100.0 38 ..................................... TCTTTTAATATTACTTTTAATGGTTCCATTTTTTATCA 16718 37 100.0 35 ..................................... AAGATGGTGCCTTCTGATGTAAGGATTGCTTTTTC 16646 37 100.0 41 ..................................... AGTTTATGAAGAACTCTGCCTTCGTCTATACCAAGACACTC 16568 37 100.0 35 ..................................... TACGCCAGAAGCGTAATATTTCACCATTTGAAGAT 16496 37 100.0 39 ..................................... TAATGCAGTTGACTTATCGGCGACCTTCTGGTCAACCTC 16420 37 100.0 36 ..................................... TGGTTCTCCATTATACCCACCCTCCGTTGTTATGGA 16347 37 100.0 39 ..................................... TACAGTTTCTATAATCTCATCCATCTGTTTCATAATTCA 16271 37 100.0 37 ..................................... TTGTTAACCAATGAATCGATATTTTTAGCTGATACCC 16197 37 100.0 36 ..................................... GTAGTACTAACGACCTGTATTGTCTTGCCGCATACT 16124 37 100.0 37 ..................................... CATACAGGTTTTCAGGAGATGATCATAGTTTCCATCG 16050 37 100.0 38 ..................................... TATTTCTGGATTGGCTCGTATTCGTGTGCCTCATCCAT 15975 37 100.0 38 ..................................... AAGAATTGTTCGGAGTGGGAAATATGCGTTTAATGGTC 15900 37 100.0 38 ..................................... GGAGATCTCCTTCTCGAGTAATACAGTGAACTTCTTAT 15825 37 100.0 38 ..................................... TACATCCTTTTGTGACTTGTATATCCTACTAAATTAAC 15750 37 100.0 37 ..................................... CTTCGCCCCGACTGGTCTCCGCGACGACGTACCAAGC 15676 37 100.0 34 ..................................... GTATTGTCTTACCGCATACGGGGCAGACTAGGTC 15605 37 100.0 37 ..................................... GCTGTCGCCCTGCCTGCCTGCCTGCCCGCTCTACCTC 15531 37 100.0 31 ..................................... GTGTAGACCGGGGTGTGCGTGCGTGCGTATA 15463 37 100.0 36 ..................................... TGCAGGGTCTGAACTCACGGAGAAGTGTATCAAGTG 15390 37 100.0 38 ..................................... ATTTTTTTCACTTCCAAAAATTAGAAGAGTTCCTCGCT 15315 37 100.0 35 ..................................... ATCGCATATAGGACAGAGTACGCGGGTGTCTCGTC 15243 37 100.0 39 ..................................... CGTGACCCTTGGTCGTAAACATAGGGTTCCGGAACCATG 15167 37 100.0 37 ..................................... AAATTGGACAAGTCAGGTTGTTTTCTGTGTCAAGGTA 15093 37 100.0 37 ..................................... TTTTTTTTGGCGCGACTTGTTAGAATGGCAAAGCAAC 15019 37 97.3 40 ...........C......................... AAGCTCTTTAGCTTCATCGTTCAATTCTTGATACAATTTT 14942 37 89.2 0 .............................C.CC.C.. | ========== ====== ====== ====== ===================================== ========================================= ================== 46 37 99.7 37 GTAGCAGAAGGGGTTCCACGAAAACAAGGATTGCAAC # Left flank : CGTATGAGTACCAGGTCTATGTTGAGGGGGCAGGAAACGGCCCGTCCTTTGTGGTGCTGCCACGAACCCACGCGGACTACAAGGGAACGACACTGATCCGGGGCGGTTCTGCCGAGGGGTGGCTCGTCTTCCAGGTCCCGGTCGGGAAGGAGGCGATGCTCGCCTATACATCCCTCTTCGGTGGCCCGGCCGGCTTCATCCGGCTGAGCTGATTAAGGGAGCAATTGCCAGGGGATGGATGTCGTGGTTGGCCCATCCCCCGGCCTCTTTTTCCCATTTACCTCCGGATTCGGGCACGGCAGGGTTGCAATGCCTGCAGAGTGCCGGAAAACCTCGGAGATTTGATTTACATCGATTAAATTGAAAAATAATAGTAAAATAAGTTTGGAATTTTGCAAAAATGCGGAAAAGGTGATCGGAGGGGGTCGTCCGGTTTATATACCCTGACAAAAAGGAGCGGATAGAAAGGGTTATCTGGGAAAAGGAACAAATTTGACCCT # Right flank : GCATCCCCTGGCATAACCTCACCCCCTGTTCCCCAGATGCCCCGGGAGATTCAAAGAGATACTATTATCCCGGTCTTCTCACCAGGATACTATTATACAGGCGATCTGCCGGGTGGTTGAGTAGGATGTACTGCGTCATTAACGGATATGGGGCTGTTATACGGCGGAAGCAGAACCGTTTTGTCATCGAGTCCGAGGGAGAGATCCGGGAGTTCCCCGCATCTGATCTCCGGCAGATCCTCCTCTCGGATGCGGCAACGGTGACAACCGGGGCGATGGCACTGGCGGCAGGGAACGGTACCGACATCGCGGTCATCGGGCGGGACGGAAGACCGGTCTGCCGGCTTGTCCCCTGTTCCGTGACCGGGACGGCTGCAACCAGGAAGAACCAGGTGCTCTTCTCCAGTAGTCCGGAGGGGTACAGTTTCATCGCATCCATCATCCGTGCCAAGCTCTTTAATATGGGCTCGCTCATCCAGGCACTCGGGAGACGCCGGGAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGAAGGGGTTCCACGAAAACAAGGATTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 30859-28442 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWHL01000017.1 Methanocalculus chunghsingensis strain K1F9705b K1F9705b_contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 30858 36 100.0 37 .................................... GTGGCTCTCGAATGAGAATTCCGCTCTCCGGCACATG 30785 36 100.0 39 .................................... AGCATCTTATGATAAGACATACGAATATCGAGAAGATGG 30710 36 100.0 40 .................................... GGGGCTCTCGGTCGCAGCAAGTTTGAAGGTGATGGGGGTG 30634 36 100.0 39 .................................... ATCAGAATCGGAATTTATCGAACAAATAACCTATCAGGG 30559 36 100.0 41 .................................... ATTACGAGGTTTCGGATGGGTTGTTCATGGAGATTGAAAAG 30482 36 100.0 41 .................................... ACCAACCGAACCTGAACTTCTGTATAGCGAACAGTGTTCGG 30405 36 100.0 36 .................................... GAGAAACGCAATCTTTGAGGATGAAAACCTCACAGT 30333 36 100.0 38 .................................... GTACGTCCCCAGACAGGAGGGCTGACAAGTCAGCCGTT 30259 36 100.0 36 .................................... ACCTCTCTTGGCTTCATCCTCTTTACGATACCTTCT 30187 36 100.0 36 .................................... AGAGCGGGTGGGCAGACATGCAGAGCAAAAGCCCTC 30115 36 100.0 39 .................................... GGTGTCTCTTGCAGATTTAATCCACTCTATTGACCTCTC 30040 36 100.0 38 .................................... ATAGTTGGAAGTTGAGGGGATATTTGCCCCCCTCTTCC 29966 36 100.0 39 .................................... AAGGTTACGAGTGGCGACGTACCACCGGGAGCCATGGAC 29891 36 100.0 38 .................................... GCTACGGCTAACGCCACTGCGCTAACCTTCGTGTCTAC 29817 36 100.0 38 .................................... ATGATACATACGAATTTAAAAATGATGAGGGGAAAGCC 29743 36 100.0 38 .................................... TGCGCTACCCGTCTTGTCTACATGCCAAACCATACCCC 29669 36 100.0 38 .................................... ACCATGAGGTGAAAAAAATGGACAACCAATCGATCGAC 29595 36 100.0 37 .................................... CTCTGATCGGTACGCCCTTAGGGCAACGTTCAGCGTC 29522 36 100.0 39 .................................... ATGGAACAATCTCTTCATTAGTTGAATTATGTATAAAAC 29447 36 100.0 39 .................................... TGCCATGAGAGGAACGCTAATACGGCGTACTCCTTACTC 29372 36 100.0 38 .................................... ATCATTTTTAGCCACTCGTTAAAGTGGCTTTCCATATC 29298 36 100.0 39 .................................... TATACCTTAGTTTTGGGTATTGGTGGCCCGCATGTAGAC 29223 36 100.0 36 .................................... ACAACAACTGAAAGGATATACATCAAGAATACTTCC 29151 36 100.0 37 .................................... TTAGAAACAATGATGAGGATCGCCGGAGAAGAAACTA 29078 36 100.0 39 .................................... GGTATCTTAACGCATTGCATAAAAGACATAACCAATATA 29003 36 100.0 38 .................................... TGTATAGGAGAAGATCTATGGATCTCAGGCAATTCGCA 28929 36 100.0 39 .................................... ACTGCCGGAGAGCGACAGATCAGAACACACCCGAACCCA 28854 36 100.0 37 .................................... GATATATGGATCTCAGGCAATTCGCCTCTTCAGAGGA 28781 36 100.0 39 .................................... CGTTACCGCGTTACTTCTCGCGGAGATCACTCGCGGGAA 28706 36 100.0 46 .................................... CAGACAGGGTGAAGTCGATCACTCAGGACAGCCTCCCGGCTGGGTA 28624 36 100.0 39 .................................... ATTTTTCTGAGTGTGAAGAGTGTAGACGGAGATGTGCGA 28549 36 100.0 36 .................................... ACCACAATCACCGCATGGGACAGCTGGGAGATGGAA 28477 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 33 36 100.0 38 TTGCAATCCTTGTTTTCGTGGAACCCCTTCTGCTAC # Left flank : AGTTTTCACCCCCCCATCCCATAGATGGGGATGGGGATTACATAGCCTCAGAGACCATAACAATATCGTACACTTTGGGCTTGAATTTGAAATAGGAGAGATTATTCTTTGTTTTTTAATTCGGAGACCCCCTGTCTTTAAAATAAATAATAACATTTAGATATATAAAATAATATATTTATAGAATCGTCTTATATTAGTCGATTAAGACAGATCTGTGCCTTTATGAGGGAGGAATGGGGGAGGGGGATGTACACCTGGGGACGGAGGAAACTCAGGGTAGCGTCGTGAGGGTAGGAAGCAGGAGGATGGTGGAGGAGAATGATGGATCCTGATACAATCCTTCCTGTATAGCTGTGACCTCTGGTTTATGGAGGCTCTTCTGCTCCATGACTGTTTTCCGAATGTCGATCATACAACACTGAACCATTGTAATCCTTTTCGTGGAAGTACTTCTGCTACTCAGAGGAACGACACATGAAAAAGACACACTATAGGGG # Right flank : GGGTCAAATTTGTTTCTTTTCCCAGATAACCCTTTCTATTCGCTCCTTTTTGTCAGGGTATATAAACCGGACGACCCCCTCCGATCACCTTTTCCGCATTTTTGCAAAATTTCAAACTCATTTTGCTATTATTTTTCAATTTAATCGGTTTAAATCAAATCTCCGAGGTTTTCATACCCATTCCGTAGTTTTCCATATCATCCCCTCCCCCATCCCCACATCCATCTCTCCGCCTCGGGAGGGAGCAAGATGAGAGGCGGTCCTTTGGTAATATTCAAAAGGATTGAGGTGGAGAGACTGATGCAGAGCATTATGAAGACCGCAGTTATTGCCCCGGTCGGAATGAGCCCCCCTGCCGTCAGCTCATTTATAGACGGTATCGGGGAGCCGATATCCGATGTTGTCCTTCTTGTCACCCGGGATCGCGATGTCCTCGCCGGAACCCGGTTCCTGGATGCAGGTCTCTCCCTCAGATATCCCTGGCTCCGGATCCACCCGGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGCAATCCTTGTTTTCGTGGAACCCCTTCTGCTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //