Array 1 189554-192690 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVSW01000002.1 Streptococcus anginosus strain gl gl.s8-trimmed-pair1.paired_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 189554 36 100.0 30 .................................... TGATTATCTTTGTCAAGAGAATTTGCGTTA 189620 36 100.0 30 .................................... TGATATACTTTTTATATAAGCCCCCAAACG 189686 36 100.0 30 .................................... TCTTTCCAATCTTTATTTCACAAATATTGT 189752 36 100.0 30 .................................... TTGTAGTAGATGAAGCACATCACGCTATAT 189818 36 100.0 30 .................................... TACAAGTTCAGGTAGTAGTCTGTTGAGTGC 189884 36 100.0 30 .................................... TACAGGAACAAGCTGAAAAAGAACAGCTAC 189950 36 100.0 30 .................................... TTGCTGTTAGCGGTTACCCTGCCTTGCGCT 190016 36 100.0 30 .................................... AGTCTGACACCAGTCTCATGATGGCCCTTT 190082 36 100.0 30 .................................... GTCAGGCATTAGCATATCGCCAAAAGGATA 190148 36 100.0 30 .................................... TTGGGGCACGTAGAGTTTTGTTGCGATTTT 190214 36 100.0 30 .................................... AAGCTATCGGAAAAGAGTGGAACAAGCATT 190280 36 100.0 30 .................................... AATCCGAGAAGAGATTAGTAAGATTTCTGT 190346 36 100.0 30 .................................... AGACATTCTTTATTGTCTCGTTCTATTGCT 190412 36 100.0 29 .................................... GTCACATTGGTCGATATTGGCGATTTGAT 190477 36 100.0 30 .................................... CCTCGCCTATCGCATTCTTGATTGAGTGTT 190543 36 100.0 30 .................................... TTCTGATTCAGATGCTAAAAGCCCCAAAGG 190609 36 100.0 30 .................................... CTCAACTCAACTCTTCTATTCTGTCGTTGC 190675 36 100.0 30 .................................... TGATTTGGAAATCTTAGCAAAAATAGAAAG 190741 36 100.0 30 .................................... TTTACAGGCGGGTGTATTTAGTTATTATAC 190807 36 100.0 30 .................................... CGTTCATTTAGTGTCATTGTCTGCCTCCAA 190873 36 100.0 30 .................................... CTTTTGTGCTTTAAGACACCACTCTGGACA 190939 36 100.0 30 .................................... ATGACATACTACATTTCAGACTGTTATCTG 191005 36 100.0 30 .................................... TGTTACTGGAATGAGACTAGGCGAAAGCCT 191071 36 100.0 30 .................................... AGGTAGTGGAGATAAGTTTACTGTATCTAA 191137 36 100.0 30 .................................... ATGATAAAAAACGTAGTCGATTTAAAGATT 191203 36 100.0 30 .................................... AAGATAAAGAACTAAAAAAAGCTATGAATT 191269 36 100.0 30 .................................... TTACACGAATATCTACAGATGGCGTTTTTA 191335 36 100.0 30 .................................... CGCGCTTTTTTGATATAATCATCTCAAAGG 191401 36 100.0 30 .................................... TGCCGGCCAACTTTACAAATACAGTTAATG 191467 36 100.0 30 .................................... TCCGCGCTGTTCTAAGAATCGAATTTGTTT 191533 36 100.0 30 .................................... ACCATGCTATTCCAAGCATTTTGTGCACCT 191599 36 100.0 30 .................................... TTAGGCTGATTGAGCTTTTCCTCACCTTTA 191665 36 100.0 30 .................................... TATAATAGTGTTGTGAAATTTATAACTAAA 191731 36 100.0 30 .................................... ATTGTGACACCGAAAGCAAATGCCGTCTAT 191797 36 100.0 30 .................................... AAACGAATTACCACCAATTTCTAGTTTTCT 191863 36 100.0 30 .................................... ATTCCCGTTTCCTAAACCGCTAAATAGTGA 191929 36 100.0 30 .................................... TAAACTGCTGTGATATTCAGTATCTTCGTT 191995 36 100.0 30 .................................... TAGTTAGAAAAGGTTAACGTGTTATTGTTT 192061 36 100.0 30 .................................... CTATTATCAATTTCCGAGAGCAGATAGCCT 192127 36 100.0 30 .................................... TCACGAAACAACCTGCAGACAAAATAGAAA 192193 36 100.0 30 .................................... TAACAGCTGCAACCATCAAAGAAGATAAGC 192259 36 100.0 30 .................................... ATCTTATTTGCTAGATTCCATTTACTACCT 192325 36 100.0 30 .................................... CACAAGGTAGCTTAAAACGTAGGCATTGGT 192391 36 100.0 30 .................................... ATGAAATGTATTATGAATTTTATTGAGCAT 192457 36 100.0 30 .................................... AATACTCGGTTTGCGCGTGGGGAATACATA 192523 36 100.0 30 .................................... ACAAGCGATTGAATCGATTCTCTTAATTTA 192589 36 100.0 30 .................................... TGCCGGCCAACTTTACAAATACAGTTAATG 192655 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 48 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCCGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATATGTCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAACAAATATAAGGAATCGTTCGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //