Array 1 45737-46230 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAIDI010000009.1 Streptococcus pyogenes strain 44004V1S1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     45737	    32	 100.0	    34	................................	AAGTCATCACGTAAATTTTGCAACGCTTCATCTG  	
     45803	    32	 100.0	    33	................................	CATCTAAAGCATCTGATCGGTTTTTAAGCTCAT   	
     45868	    32	 100.0	    33	................................	TGTATAAATTGCGAAAAGAAAAAGGAATTTCAC   	
     45933	    32	 100.0	    34	................................	ATTTAGTCGCCAACTTTAACTATGATCAAACTTG  	
     45999	    32	  96.9	    36	...C............................	TCTGAAGTTAAGACCTTGTCCAGAAGCCAAACCAAG	
     46067	    32	 100.0	    33	................................	GTCGATAATGGCTTGATGATCACCTGAGAAAGT   	
     46132	    32	 100.0	    35	................................	TCCATTTTTTACTTTCTCATGTGGCAAAACATAAT 	
     46199	    32	  96.9	     0	...............................G	|                                   	
==========	======	======	======	================================	====================================	==================
         8	    32	  99.2	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCTATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  GATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC

# Questionable array : NO	 Score: 9.22
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : NA
//