Array 1 34027-33879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUZW010000005.1 Vibrio alginolyticus strain AmN7-20 AmN7-20_ctg005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34026 28 100.0 32 ............................ TTGATGAATCAAATCGCATTACAAGAGGTGAA 33966 28 100.0 32 ............................ TTTACTAGTCCTGATCTAGTTAAAGGTTTTTG 33906 28 89.3 0 ....................TC..G... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 GTACTCCGCCGAGTAGGCGGCTAATAAT # Left flank : ACAATGATGAACGAAAACCTCTTTGATATTTCAGATATTAAGGTTGTTCCTGATGACGCAGAGGAAGTTCGATTTGTATTCAATAAAACGATTCAAAAGATCTTCAATGGTTCGAAAAAGCGAAGAATTAAACGAGCAATGAAACGTGCTGAGAAGCAAGGTCGTATTTACACACCTATATCTATTGAAGAGCGGGAGTTTGATCTATTCCATGAAGTCCCTATAAGTAGTCAGTCATCAGGCCACGAATTTGTTTTGCATATTCAGCGGCAATGTCATGTGGAAGCGGAAATAGGACAGGGCTTTAATGGTTATGGTTTCGCATCCAATAACAAGTGGAGAGGGACAGTACCTATCATCACGGTTTAACCCTATTTTAGAACGCTAAAAGTTAATGGTCTAAAATCAAGCAGTTAAATATAGAGCTAAAAAGAAAGGTATTTTAGCTAGAAAAGTTATAAATATTCGTTTAATAAATGAGTTATGTTGTAATCTTAATA # Right flank : AGGCCAGGAAGTAAGCATCCAATATCCGCTGGGCTAGCGGTAAATAAGCCAACTAACCCATCATAGTCCATAGTCGAAAGCCTGTGGTTCTGGCTTTATGGGAGGATGAAGCATTACTCAAAACTGAGTTCATTAGTTTAAAATCTCTCGTAGCAATCATTTGTTTCAAGTAGTACTTTAATCATGTCTAGGTTACATAGTCTAAACTTATAGTACTTTTTACTTCCTGCCATGTTTGCTTTCTCGAGTCGTTTATTTTCTTCCTTGATTTGCTCAGGTGACCGAGTATCAATATTCCATTTGTTTTTTAAAATCCACAAAAAAGCAGCTCTCTTTAAAACAAATAACTGGTCAGTCCCGCTACTTAAACCAAAGTCGATTCGGATTTCCTCTCGCTCTTTTTCATTTCTATCCTCATGTAACTTTAAATCTAAAGGAATTTCTACGTTCCAATCTGGGTCGGAGTCTAAGTCTTCGTGCTTTTGCTTTTTGAAACCTAG # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCGCCGAGTAGGCGGCTAATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTATCCGCCGAGTAGGCGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //