Array 1 286-1333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUXI01000272.1 Pseudomonas aeruginosa strain 681_PAER 585_7642_122106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 286 28 100.0 32 ............................ AACGGACCGATGCCATCGTCGGCACGCTCGTA 346 28 100.0 32 ............................ TTAAGCCACGCGTCCAGATGGCGCAGGCAAGG 406 28 100.0 32 ............................ TTTGCCCAGGCGTGCGCGGGATGAACTGGAAC 466 28 100.0 32 ............................ TGGGGCGGTTTGGTGTTCTTGCGACTCTCTTC 526 28 100.0 32 ............................ TTCGAACTGCCAGATTTGCTCGCGTGCGTTCT 586 28 100.0 32 ............................ TTGACCACGGGCGAGACTTACGCCGAAATCAG 646 28 100.0 32 ............................ TCATGGGCTGGGCGGCGAACGTCCTCGCGCAT 706 28 100.0 32 ............................ TCTACGTCCGCCAATTCTCTTGGCCCGTTCGC 766 28 100.0 32 ............................ TGGGTGGCCGACATCGTTGCGTCGAACTCGTA 826 28 100.0 32 ............................ GCATGCTGTCCGGCCTGTTGATCGGCCCGCTG 886 28 100.0 32 ............................ GCAACGCCGGCCGAAGACCAGACCATCACCGA 946 28 100.0 32 ............................ TTCACCGTCACCCAGTCCTGGGTGGCGTAGAC 1006 28 100.0 32 ............................ TTGGCAGCTGTAGCCAGAGCCGGATGCGAAGC 1066 28 100.0 32 ............................ AGAGCGCTCTGGTGGACGGCTGGGTACGACGA 1126 28 100.0 32 ............................ CGTATCAGCGGGCCGCCAATGAAACCGTCGAG 1186 28 100.0 32 ............................ AAGAAGATGAACCGCGACGACCACCGATAGGA 1246 28 100.0 32 ............................ AACGCCCAGCGCCAGCGGGAGAAACGCCAGCG 1306 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //