Array 1 35453-36000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZKH01000062.1 Streptomyces rubellomurinus strain ATCC 31215 contig-61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 35453 28 82.8 32 ...-..C.......GA......G...... GGCGGACGGCATCACCGGCCGCGACTCGCTGA T,A [35463,35480] 35515 29 96.6 39 .......A..................... GCGCAGACCCCGCCCCCCGTGCTCGGTACCCGGGTGCCC 35583 29 96.6 36 ....................A........ TGGCCTGCCGCTGGTCGACGTCGTCGACCTCGAACG 35648 29 86.2 35 .................A....G...CC. TTCGCCTTCCGGCGCCGCATGCGACTGATCCCCTT 35712 29 100.0 36 ............................. GTCGTTCATGATCTTGAGGACGGGCACGATCCAGAT 35777 29 96.6 36 ......................G...... CGGCATGGGTGCGGTCGCTGACGTAGGCCGTCACCG 35842 29 96.6 36 ......................A...... GGGGCATGCCGTTGTGGGCCCAGATGGTGAGGCCGT 35907 29 100.0 36 ............................. AGGCCGCCGGGGTCCCTACTCGCTAACCGTCCCAAC 35972 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 9 29 95.0 36 GTTGCAAGCCCTCCAGGGCTGATCACGAC # Left flank : CGGATCGAGACCGGCCGGCGCAAGCCCACCCTGGAGGTGCTGCTGCAACTCGCGAAGGCGTACGGCGCCTCCCTGGACGAACTGGCCGGCACCGCACCCACGGTGGCGCCGCGGCGTTCCGGCAACGACAAGACGGTGCTACCACTGACCCGGTACGTCGGGGGCCTGCACGCCCACAAGCACGTCCTCCCCGCCGTCGACGCACCGCCGGCCCGGCCGCGGCAGGCCTCCCACGACGGCTACGAATGGCTGTGCGTCCTCTACGGCCGACTGTGGCTGGCCCTCGGCACGCAGGACCTCGTGCTGAACGCCGGGGACGTGGCCGAATTCGAGACCCGCACCCCCCACGGACTCGCCAACGCCGGCCCGGGCGGCCCGGTCGAGTACCTGATCATGTTCGGCCCCCAGGGCGAGCGTCTACGACCACGCACCCCGGCCGCCGGCTGGTGGGCCCGGTAGCGCGCCGCACCGCGTTCCGCGCCGGCGCGACGGTATCTACG # Right flank : CCCGAGGGTAAAGCCCCAGGTCAGAGCACCTGGGAGCGCCGCTGTGGGTCGTGGTGGTGCAGCGACCTGCTGGTACTGCAGCGGTGCTGGTCACAGGATGTCGCCCGGCCCGCCGAGGGTGGCGCCGATGGTTGTGGCGGCGATCATGTCCGGGGAGCGGGCCGTGTAGGTGACGATGCTGTCGTGGGTGGGGTCGATCACGGCGTTGAGGGCGTAGGTAAGAGCCCGGTACTGGGCTGCGGTGAGTTCGCCCTGGAAGACGCTGCGTTGGGTCCAGTGGAGGTACTTGCGGCAGGTCTTCAGAACCTTGGGGTTGCGTTCGGCGGCGGTGTCGTAGACCAGGATGACGAACATCTGCGGCTACCACCAGGGCCGGAAAGGCTTGTACGGGGTGCCCTCCAGGCACAGCCGGACGAGCTTGAGCGCTTCGAGGTGAATGAGCTCCTCGTAGCTGACGTTCCGTTTGAGCCCTCGGTGGAACACCGTCGTCGCGAGTTCGT # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAGCCCTCCAGGGCTGATCACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 44422-44777 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZKH01000062.1 Streptomyces rubellomurinus strain ATCC 31215 contig-61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 44422 29 100.0 37 ............................. CCGCCCGCACTGCCAAGGCGGGTATCCGCACCCTCCT 44488 29 100.0 37 ............................. AGGATGCTGACGCGCAGGGGCGCCGGCCGCTCGCCGG 44554 29 100.0 37 ............................. GTCCCGGCGCTGCCGAACCCCCGCCGTCCGCGACCGA 44620 29 100.0 35 ............................. GCGAACCACGCCCTGCCCGCAGCGCGAACCGGCGA 44684 29 96.6 36 .......C..................... CCGTCGCCGGTGCCGGGCGTCGGCTCGGTCGCGCAG 44749 29 93.1 0 .......C...............C..... | ========== ====== ====== ====== ============================= ===================================== ================== 6 29 98.3 37 GTCGTAATCAGCCCTGGAGGGCTTGCAAC # Left flank : ACGTGGAGTACACACCCTTCGTGCGCGGCGCCCCCAAGAACAGCGGCCCCCCCACCCCCACGGGCTTCAGCGGCTTCCCCCGCCACCCCTCGTTGTGCAACGCGTCCGCCAACGCCTCGTCCTGGCTGCTCAGCAACCGGTACACCACACCCCGCGCCGCCCCGTGCACCTCCTCCCACGGCACACGAGGCGCATCCGGCACCACATCAACCCTCACCCGCACCGCACTCTCCCGACCGATCTCAGGCAACCTGGCCACGCCGCAAGCTAGTTGGATGCGAACGATCAGCGTTCCATTCCTCATAATTCGCACCGATAGCCAGCTGTTTGTGCTACGGGCTGCGGCAGCACGGCCGCTCCGGCACCACAACAGCGTCGCCCCGGGAACACCTCAAGCCCAAAACGCTCTGACCTGCGGTGATGCACTACCGCCGAGTCGCCGCATCGCGGCCGGCACAGGCAAACCGTCATCGCTCGCGGACCTGGTGCTTTACCCTCGG # Right flank : CGCGCAGCCGCCGATGAGGGCGAGGCGGAGGTGCTGCTCCCGGCGGCCCCTACCACACGTCCGCGCAGCTCACGCGCGGGCCGGGTGGCTGCCGGGACCCCTGGGGGCCACCACAATGGTGCGGACAGATCTTCGGAAGTACAGAGAAAGCGATGCACCATGGATCTCGGCGTGCGCTGGAAGCTGCACGGTGACGGGCGCACGCCCGCGCCGGGGGCGGTGGTCCGTCCCGACGAACGGCTCTCCTGGCCCCGCACGGTAGGGCTCGGCGCCCAGCACGTGGTGGCGATGTTCGGGGCGAGCTTCGTGGCGCCGGTGTTGATGGGCCTCGACCCGAACCTCGCGATCATGATGTCCGGCGTGGCGACCGTGATCTTCCTGCTGGCCACCAAGGGGCGGGTGCCCAGTTACCTGGGCTGCTCGTTGTCCTTCGTGGGCGTGGCCGCGGTGATCCGGGCGCAGGGCGGCACCAGCGCGACGGTGACCGGCGCGGTGTTCGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTAATCAGCCCTGGAGGGCTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //