Array 1 201990-202200 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHH01000038.1 Streptomyces sp. SID7805 SID7805.c38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 201990 28 96.4 33 .............G.............. CTTCGAGCTGCTGACGTCGTATCGGCGCGGGCG 202051 28 100.0 33 ............................ CCAGATGGGGGAGGACGGATACTGCGGGGCTTT 202112 28 100.0 33 ............................ CGCTTCCTCCATGCGGTTGGTGGCATGGACGAT 202173 28 89.3 0 ............T..........A.C.. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 33 GTGGTCCCCGCGCATGCGGGGATGGTCC # Left flank : CCGTTGTGCGGAAGACGGGACCCAGTGCGCGGACGAGAAGCGCATGGAGGAGATCGTCAAGCTCGCTGCGGAGAAGAAGATCGGGATCGGGGGGCCGGACATCCTGCCGGACAGGTATTACCCGACGCAGAAGTCCTACCAGTTCATCGAGAAGTACAAGAAGCAACTCCCGGTCGTCGCCATGGCGGTCCAGGAACCCACCCTCAAGTATGAGGACCCCAAGAACCCGGGCCACCTCTATACCCGGGAACGATTCACGGACTTCGCACGGGAAAGGCTCGGCGCAAGTTCCATCTTCTGGACCGTCGAGGCGGACTGGCTGAAGAAGCCCGCGATGTGACGGATGGAGCCTTGGCATCAGCCAATAGGGCTTGAGCTGCGATCGATGGTGGAGGCGAGCGTCGGAGGGCTTCCATATGCCTGCTACGTCTGATTGGCCGGACTCTGTGAAAGTGCTCAAAAATCGCACAGGTCCACGGTAAAGTCGCAGGTCGCGCCTT # Right flank : CCACTACCGCCCCGCGAACCAGCCCCGTACCCCCACCCAAGAAAGAGCGGCACCACAACGGCACCGCCCCTCCTCGTACGGCACCGCCCCTCCTCGTACTACCGCCCCCCCCCCCCGCCCGCCCCCGCCACCAGCCGCACCCGCGCCGTACCTCAGACCACCTCCCGGCTGATCGGCAGG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 30169-32499 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHH01000143.1 Streptomyces sp. SID7805 SID7805.c143, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 30169 29 100.0 32 ............................. CGGAGGCGGAGGGGCGGCGGCTGACAGTCGGT 30230 29 100.0 32 ............................. TGAGCGGCGAACAGCAGCTTGCAGGCGCCGCG 30291 29 100.0 32 ............................. CCGGCGCTGCGCACCGCCGAGGGCCGCCAGGC 30352 29 100.0 32 ............................. TTGGCGTCCGGCTGAGTGCCGAAGGTCTCGGC 30413 29 100.0 32 ............................. CTGGGCACCGCGTGCAGCGTCCGCTGCTACGA 30474 29 100.0 32 ............................. AAGTGCTGTCGGCGAGTCGTCGATAAAGCCAC 30535 29 100.0 32 ............................. CACGCGGGGCGTTCACCCGGCTGCGGGCTGGT 30596 29 100.0 32 ............................. GCGTCGCAGCTGAACAGCCCGCCGATGTCGTC 30657 29 100.0 31 ............................. AAGGCGGCAGTGCGGGAATCTTCCAGAGCGA 30717 29 100.0 32 ............................. AGGCTGTGCAGCAGCTCGAATTGACGATGTGA 30778 29 100.0 15 ............................. AGGCTGATCGGGAGG Deletion [30822] 30822 29 100.0 32 ............................. GAGTCCAGGGCCGCGCAGTGCGACGCGCAGGC 30883 29 100.0 32 ............................. CCGAAGCGAAGAATACGTGGCGTAGACCGTGA 30944 29 100.0 32 ............................. AGGCGTCCCGGCGTCAGCTCCGGGTCCCTGAT 31005 29 100.0 32 ............................. GGTTACTCGGGTGAGGTCATGTGGAACATCGG 31066 29 100.0 32 ............................. GCACAGCCTCGGCCAGGTGCTCAATGCCGTCC 31127 29 100.0 32 ............................. GCCCAGGATCCCGACCGGCGGGCTTGAGCGAC 31188 29 100.0 32 ............................. TCGCCGGGCTCGGCGTGCTTGTCTGACCGAGG 31249 29 100.0 32 ............................. GGTTCGCCGCCAATTGGCGGCACGGCGCTCGG 31310 29 100.0 32 ............................. GACCCGTATATCGAGGACCCGGCGCGCTCGCC 31371 29 100.0 32 ............................. CGAGGGCCTCCCCCGCGCCCGGGGTGATCTGG 31432 29 100.0 32 ............................. GGCCCGCTCGCCGTCATCGACTGCGACACCGA 31493 29 100.0 32 ............................. TGGCGGCCCTCGCCGGGGCCGGCCGACTCGAC 31554 29 100.0 32 ............................. CCCGAGCGCGACACACACCCGTGGATCCGGTT 31615 29 100.0 32 ............................. GCCACCGCCGAGATCGCGCTCCTGGTGGAGGG 31676 29 100.0 33 ............................. GGCTGCGGGTGGCGCACTGACTGCTGCTCTCGG 31738 29 100.0 32 ............................. AAGGCCGACCAGGACGGCCCCAAGAAGACCAT 31799 29 100.0 32 ............................. ATGGCCATGGCCATGGCGCGCCCCACCACCAC 31860 29 100.0 32 ............................. ACTGCCCCGCGCGAGCGCGCTCCGCGGCCGGA 31921 29 100.0 32 ............................. GAAGTCGAGGCCGCCGATCTCCACCCGGAGAC 31982 29 100.0 32 ............................. CACCGGCGTCCCCACCGGCTTCGAGGACCTCG 32043 29 100.0 32 ............................. TGAACTCAGACCAGATCCCGCGGTTCCGGTTT 32104 29 100.0 32 ............................. ATCCCGGCAGCCGCGATCGCGGCCGCCGCGTG 32165 29 100.0 33 ............................. GCGATGGTGGCCGGGGCGAGTTCAGACGATTCA 32227 29 96.6 32 ...............A............. GCCCAGTAGGACACCCACCGGTGGGCACCAGG 32288 29 100.0 32 ............................. GTGACCCAGGACCCATCAGGCAGCACGGTGTA 32349 29 100.0 32 ............................. GTGGGGATGGGCGCCATTGCCCTGCTGATCGT 32410 29 100.0 32 ............................. AACAGCAACACCCGGGGCCGGGGAGGGGTTCG 32471 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.9 32 GTGGTCCCCGCGGGTGCGGGGGTGGTCCC # Left flank : CTGCCCGGTCGCCCTGCGCGGTCTGCTCACCCGCTGGCTCCTGGAGATCTCCCCGGGCGTCTTCCTCGGCGCCCCCTCCACCCGCATCCGCGAGTCCCTGTGGAAGGAAGTCCGCCAATACGCGGGCCAGGGCCGCGCCCTGCTCGCCTACCAGACCAACAACGAACAGGGCTACACATTCGAAACCCACGACCACTCATGGCACCCCACCGACCACGAGGGCCTGACATTGATCCACCGCCCGTCCCCGAAGACTCAACGCCCGGCGCCACGGGCATCGGATGGGCCGACGCCGGATGTTCCACGCCAGGGCTGGAGCAAGGCGTCCAAGAGGCGGAAGTATGGGGGGCGGTAGGAGGGCTAGGTGTCGGGCTGGGGGAGGGTTGTGGGGGGCGCGCTTTCCTCGTTGTCCGCGAGGTGAGGAGGTGGGGGGTATGTCGGAATCTGCGGAAGTGAGTAAAAACGGCCGCGTTGCTGGTTGAAAGGCCAGGTCAGGGCTT # Right flank : CCATCATGAAGCTACGCAAGCACGGCGTGCGCCGTGAGGCGCTTCGTTGTATCCCCGACTCAATCGGGAGGAACTTGGAGGAATGTTTCTGGGTCACCTGACTTACCTGGACGCGAAAGCGCGAGGGGACAAGAGCATGCCAGGGAAGCGGCGGCCGTCTGGAGGCGTCCAGGGCGGGGTGCCGCAAGACCCGCACGATAAGGCCAAGGCTGGATTGCTTGAAGCCCAATCTCCGGTGGTGAAAGTGCGCACCCGTCGGAATGACGTCTGAAACCGACGTCGCGTCATGCCCGGCCGTGAACCGTGAAGCCGAGGCAACCTCCATGACGCGAAACGCCGCCCAACGAGGGTGGTTAAGGAGATGAGTGGGCGGCCTACGTCGTGCTCGATACGTACAACGGAGACGTACCACGGGATCGCCTACGGGGCGCGAGCCCTATGGCGACGGAGGTGTCGTAGTAGTCGCAGGAGTAACGACCTGCCAAGGAGGCCGGGAAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGGGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 74034-74305 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHH01000015.1 Streptomyces sp. SID7805 SID7805.c15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74034 29 100.0 32 ............................. CCGCTCGCGGACGCCGTGCTGAGAGCTAAGCG 74095 29 100.0 32 ............................. GAGCCGGCCCCGGCCCCGCAGCCGCCCCTGGA 74156 29 100.0 32 ............................. ATCGCCAGGGATTCGCAGAGCCGCACGGTGTA 74217 29 100.0 32 ............................. GGCGGTGGCCAGTCCGGTCAGCTCACGCAGAC 74278 28 89.7 0 ..............C.....A...-.... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 CTGCTCCCCGCGTGTGCGGGGGTGACCCC # Left flank : ATCGAGGTTCTGAATGCGCAGAGACTCGGCGGCACGGAGGACCATTTCCAGGCTGGGCGCCTGGAGTTGACCGTTCTCAACTCGTCTGACCCAGGAGGCCGACATGCCGATCAGCACGGTGAGGACCGTTCTCGACACGCCTCGATATTGGCGCAGGATCTGCATTCTCTACCCAAAACACCGGCGGTGTGGCGTATGGGTCGGGGGCGTCTTCGGCAGGCACGGCCTCCCCCTCTCTGAACAGCTCGGCACTGTCAGGTATGGGCGGGGCCGGTTTCGCGCTTGAATCTTTTGTCGGGGGACTAGGCAGGGCGATACGGCTGGGGCGACACCACACTCGGCGCGCGGTGTGGCGGGGTTGCTGACGCTCCCATGTCCGGAATGCCTGAATCGATGAAAGTTGCTGAAACTCGTGGCCGGCGACGGTAAAGTCCCTGGTCACGTAGCCTGCTCCCCGCGGGTGACCCCGTGGAACGTCAGGCCGGTGCCGTCCGACGCCT # Right flank : TGCTTCACGGTGGTGTCCACGAACCGCTCGGGCCCCTCCCCACGTACACCTGTCTCTTATACACATCT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTGTGCGGGGGTGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 86700-86487 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHH01000177.1 Streptomyces sp. SID7805 SID7805.c177, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 86699 29 100.0 32 ............................. GCAGCGCTGAGCGCGATGGGGGTCGGGGGCGG 86638 29 100.0 32 ............................. CACCCTCGTGGTTCCGCTGGGTTCGCCGAACC 86577 29 100.0 32 ............................. GAGCGGCGCCGCCGCGGCCAAGTCGACTCCGA 86516 29 86.2 0 .............AC.......CA..... | G [86495] ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.5 32 GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : GGAGCGGGTCCGGCGCGAGTGTGAGCGGCAGGCCCGCCTCCACCAGATGGCCGTGCCCGATGCGATGAGGATGCTGGCTGCGGCGATTTCGCTATGGGCCGCGGTCGCCAAGCGGAGGCTGTTGAGTCCAGGGCGTGACGGAGCGGAGATGATGCAGGGCTTGCCCGATGCCGGCCCGTGACATCGCGGTAGACGATGCGGTCGGCGCTGTCGTTGATCGCGGGCGGACAGATCCCCCCGCAGAGCCGAGTTCGGAGCCTCCGTCGCTACTGGGTAGCCGATGGCGTGGGCAGTTGGCGGGTGCCTTCTTCCGGGCGTCTCTCTGGATGGGGCGGAGGTAGTGTCGATGCATGTGGATGCGGTTGGCTCGGGCACACCCACTCGACTGGTCAGGACTAGCGGGAGAGCGCCCGCATGTGTCCGCTATGCCCCATAGGTCGGACTCTGTGGAAGTATCCAAAATCCGCGCTGGCCCGAGGTGAAACCGCAGGTCGCGCCTT # Right flank : GCGATGCAGGAAGTGCTCAGCGACACGCGCCTGGGCAGTGGCGCCGCGCACCACAGCATCATCCGTATCGTCTTCGGAATCGGCAGCATTGAGTTTCCAGTACCGGCCGCCCGCTTGCCATATGCGTCCGGCGCCGTCTGTATGTGGAGGGGCGAGCGCCGTGCACTCCCTCGGGCGCTCTCGCGCGATCTCCAGCTGCCTGCTACGTGGGCAATTTACTGACCGCGGATCGCAGCTATACCCCCAGAATGACCGGGCGATCAAGGACCGGCTTCTGCGTTGCTTGCGTGATTGACCGGGGGACGGAAGGTAGACGATCTTGCGAAACCGGGCCTTCCTGGTGCCCGATCAGAGCTGAGCTCGTCCGACTTCGAGGGCCTTGCAAGACCCGCACAACCGGGTTATCACCCCGCCGATTCGCCCGCGTCGGCGCTCAGTACGCCCGCTCCGACCAGGGCGAACAGGGCGATGCCGAGGAGGATTCGGTAGATGACGAAGGG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //