Array 1 208136-211531 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJAQ01000068.1 Colwellia sp. 12G3 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 208136 36 100.0 34 .................................... AACTCATCAGCTACAGTGCCTATGAATTCATTCT 208206 36 100.0 32 .................................... AACTCACCACGCCAAATTACTTCAAGTACTGA 208274 36 100.0 35 .................................... CGTTTTACTTGTACAGCTTTCAGTGATGTAGCTAG 208345 36 100.0 32 .................................... TGGTGCAACGTAGCCATAAACAAGCCAATTAT 208413 36 100.0 32 .................................... GATAAACTACAGTTAGTGCTGCAACCTACTAC 208481 36 100.0 34 .................................... CTATCTTACGTTCTGCTGTTACTTCAGCTACTAA 208551 36 100.0 31 .................................... AGGCTAATGCCGCTGGCTAGTCTGTGCTCCC 208618 36 100.0 35 .................................... GTCTAGACCTGAGTCTAGTATGTCGATGGCTTTGA 208689 36 100.0 31 .................................... TGCTGATGCTAGGTTGTTGGCTGATGAGAAG 208756 36 100.0 31 .................................... CAGAATCAAGATTCTTGTAAATAGGTTCTTC 208823 36 100.0 35 .................................... CTAGTGATGAAGGCGAAGAACATTGCGAATGATTT 208894 36 100.0 32 .................................... CTCAACAATTTGTGAAACAAGTTTCTTCTGTG 208962 36 100.0 31 .................................... CAGCACGAAGAAGTGTTCTAACACGCTTCAT 209029 36 100.0 33 .................................... TTGTTAATAGTACCTGGTACATAATCGCTATAA 209098 36 100.0 34 .................................... ATGATGGCTAAGTCTTCTAACTAAATCGTTATAC 209168 36 100.0 33 .................................... GGTAGCCGTAGCAGCTTCGAGAGCTTGGGCTAG 209237 36 100.0 32 .................................... TTTGTAGGTAAGTTTGGTAACGTTGCTTCAAT 209305 36 100.0 33 .................................... GACGAATATCTTTTGTTACTGGTGCGCCGTTAC 209374 36 100.0 31 .................................... AAACCCTCGGCATCACGTAAATTTGCCCAGC 209441 36 100.0 31 .................................... CAGCATGAACGTTGATGAATGCTGCTGCTTT 209508 36 100.0 32 .................................... TACATAATACCAGTAGCTAATTGGTACATTAA 209576 36 100.0 32 .................................... ATATGGTCGGGTGTATCGGGTGTTGTCTGGTA 209644 36 100.0 31 .................................... AGCTTCGAGAGCTTGGGCTAGGTTGTTAGCT 209711 36 100.0 32 .................................... AAACCAATGTTAGAGGTAGCAAGGGCAAGAGC 209779 36 97.2 33 ..................................G. TGGTATGTTTACCTGATTAACGCGTTTAACGTC 209848 36 100.0 33 .................................... AACTAAATAACCAGTAGTTAAAGATTTTTCGTT 209917 36 100.0 32 .................................... CAGCTGTAATTTTAGACATGAAATTCTCCTTA 209985 36 100.0 31 .................................... TACTTTGTTACCTGATGCTATCATCATGGTA 210052 36 100.0 34 .................................... TTCCAGTTTAGCTAGACGCTGTTTGTTTTCTTCA 210122 36 100.0 34 .................................... TTCCAGTTTAGCTAGACGCTGTTTGTTTTCTTCA 210192 36 100.0 33 .................................... TTAAATATTAACGCTAAAATCTCACCAGTATCT 210261 36 100.0 33 .................................... TTGAGTCGAGTGCCACCTGCTAGTCTGTGTTCC 210330 36 100.0 31 .................................... CCTTGTATCTATTGCAGCAGTTTCTATCAAC 210397 36 100.0 33 .................................... ATTTCCAAATCAGTCATTGGACGAGTGTTATAG 210466 36 100.0 33 .................................... ATATGATTATTAGCTCACTTCTCACGCTCACTT 210535 36 100.0 33 .................................... TAGTACAGAACGGAACACGTTTGGTAGCTTTAA 210604 36 97.2 32 ................A................... TCACTGACTTGATGCAGTTGTTCATGATGGTT 210672 36 100.0 31 .................................... TTCATCGGCATCTGTTATGCAATGGAAGTAA 210739 36 100.0 32 .................................... TACTATTTACTTCTTCCAGTTCAATGCACGTT 210807 36 100.0 34 .................................... ATGGATGTAGATTGATATGCCCATGATGGTTATC 210877 36 100.0 33 .................................... AGTGATGAAGGCGAAGAACATTGCGAATGATTT 210946 36 100.0 33 .................................... TTGTTGTACATGCCATATGACATGTCACTGTTG 211015 36 100.0 33 .................................... GTATAATAATTCAATCATGGATTGTACTCCGAT 211084 36 100.0 32 .................................... TTCAGCTGCTAGGCATGTTGTGCTTAGTGCTG 211152 36 100.0 33 .................................... GGGGAAGCTATCCCCTTTAGACAGTTGTAAGCA 211221 36 100.0 33 .................................... TTTTATCAATACTGCTCATGGTTCTACCCTATG 211290 36 100.0 34 .................................... GTTGTGCTTAGTGCTGAGAACACTGCCTTTATAG 211360 36 100.0 32 .................................... TGATACTGCTAGCTCTATTTCTTTAGACATTA 211428 36 97.2 32 T................................... TTACCACTTGAAGTCTTTGAGGCCTTCGTTAG 211496 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== =================================== ================== 50 36 99.8 33 GTCATAACAAAGCCCTGTTTATAAAGGGATTAAGAC # Left flank : TAATTACCGTTGTTACTCTTATAGCGTTTAATAATAAGGACCGAAAATGCCGCAATCATACTTAATATGTTACGACATACGTAATCCAAAGCGATTACAAAAAGTTCATAAGGTTATTATTCACTATGGTGTGCTTTTACAATTCTCAGTGTATTACGGTTTAATGGAGCAACATACCTTAAAAGAAATGGTAGATAAATTAATCACCATTATTAATGATAAAGAAGATGATATTCGCATTTATCCAATACACGGTTCTACCCTTGAAAACTGGCCTAAAGAAGGGTTTAGCGGCAATGATAAATTTTTATTATTAAACTAACGGAATACATTGAAAAACATTAGCAAATTTAATAAGATAATTAGGTTATGTCGATATACGTTTATGGATTTTATAGATGGTAAAAAACAAAGGTTTTCCCACCAACTTTGCACTAACAATTAAAAATTGTGAGGCTGTTTTTAATTGTATGAAAAGTATAACTAAATACAACCATACC # Right flank : GAAGAATATGAACAGGGCTGATAAAGGCAGATTAGTATAATTCCTTTATACAAATTTTTTATAAAAGCTAAAATACCCGAACAACATTACACGACCTCTGGAGGGTTATATGGGTGAACGAAGATTAGATTTAGTAGCGAAGACATCTGGCGTAAGCCTCAAGAATGTATGCAAAGTGATAGCCTCTTTACAGCTAGTAGGTGATTGGTCAGGCAATACGCTTGAGGAGCTTGTGTACCAAGACCAACTAGACACCTCACCACCTGAGCCTAAGCAGGTAGCTGAAGTAGAAGCACAGTACGATTCCATGGTGAAATACTTCGATGATCGGGGCAGCCGTGACATTGTGGTATCGGTGCGTAAACTAAAAGGTAGCAAGTTCATAGTCATAACACCACCTTGCTTATAAAGGGATTAAGAAGCCTTTAGGTACAAACACGTTTATTCTTATTAGTCATAACAACACCCTACTTATAAAGAGATTAACACATCAAAAAAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAACAAAGCCCTGTTTATAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //