Array 1 10491-10716 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVJP01000014.1 Bacillus cereus strain AFS062062 AFS062062_105_F12_Contig14_140523, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 10491 29 100.0 37 ............................. GCTGTATTATCTTTAACTTCTTTCTTCTCTAAATCTG 10557 29 100.0 36 ............................. ACATACGGTGATAAAACTACATCGTATCAGGTATAG 10622 29 100.0 37 ............................. GAATACTCTCACTAGGAGGTGTTGTGACGTTATGACG 10688 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 100.0 37 TTTAAATACATCTTATGTTTCTGTTCAAC # Left flank : ATATAGGGAAATACCTATCAACGTTTTGAAAAAAAAGACAAAAAAAGCGACGAAAAACGAAAAGAACCACCCAACGCCGCAAACGTACTTGGTGGTTCAATAAAAAATAACTAAATTTTTAGTAACCAACCACCTTGCGGTAGCTGTTACATAAGGCGAAGTGTTACCAGCACTTCGTCTTCTTTAGTTTATGCAAAAACTATTGTTATAATACTTCTACACATATTATAACATCAACTATAGTACATGTCATGCAGATTTGTTCACTATAGTTGGTAAAAGAGACCAAATTATTATCAAAACGAAATCAATTTTGTTCCTGTCTCAAAATACTTTGCAGGAGCATAGATTTTCCTACTCTTAATTCCCCTTTCTATGAAAAAACTTCTCTCTTTAAAAATTTTCCTTTAGCTTATCTATTGAGTTACTCGAAATCAATTCTAATTTAAGAATTTTGTTCAACAAGTTACGTACTTACGGTAAAATCAATAGACCAAAAT # Right flank : CACCGATTAAATCAACTTTTTATTACCTTCATATTTTATATAATACTATACTGCATATGAGTTTAGTGATTTTTTTACCAGCAGTTCATAAAAAAAATAAAATTCTCAAAAAGAAATAGTATAAGTCTTGAATTAACAAAGTTTATTAGATTCCCACTATCATTTCACTTGGTAAATTCACAAAAATAGGAGATCGCTATTATTTCTATACCCTATTTCAATCTCATCAAAGCTATATTCATTTAGCATTTTGATAATAGTAACTAAGTCTTCCCCCTCATTTATAATATTCCTAATTTCCTTTTCCATTTTTAATAAATTTGAGGGAGTAATCCCCCCCCCTAAAAGTAGATTTTTGATAATGATTTAAATATTTTTTACAGATTTTAAAAACTTTCGTCACTCGTTTCTCATTTACATCATAAAAAACAAACGCATAATTAGCATTCATTTGATTTTTCATTATTTTTTCTCCTTTAGATTAAATGGAATAAAAGAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACATCTTATGTTTCTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 20585-19894 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVJP01000014.1 Bacillus cereus strain AFS062062 AFS062062_105_F12_Contig14_140523, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20584 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 20518 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 20453 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 20388 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 20321 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 20255 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 20188 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 20121 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 20055 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 19989 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 19923 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : GCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGATT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //