Array 1 1379835-1381422 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024708.1 Acinetobacter sp. Tol 5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1379835 28 100.0 32 ............................ TAAAGATCGTATCTCAACATATAAGATTAAGT 1379895 28 100.0 32 ............................ TAACTCATTCATGGTTGCTAATGCATTCGTAG 1379955 28 100.0 32 ............................ TTTGCCACCGGATTGCGATTGGCGAACAACTC 1380015 28 100.0 32 ............................ TGCGACCAATGCTGGCTGTAAATCAGTCGTAA 1380075 28 100.0 32 ............................ TGCGGGATTGTTCGGGTTGTACACAGTAGGTA 1380135 28 100.0 32 ............................ AAAAGCCTACGGCAAATTTGAAGAAGTAAAAA 1380195 28 100.0 32 ............................ AAAAAAACAGGTGTTAATTTCAAAGGTAAACT 1380255 28 100.0 32 ............................ AATACACGATCATTCAGAGGCTATCCTCAATG 1380315 28 100.0 32 ............................ TCTAAAACCTCATAATATAAAATTATTATCAC 1380375 28 100.0 32 ............................ CATGATTTGAAATTGTCCCCAAGAACAAGACA 1380435 28 100.0 32 ............................ AATAAGATTGGTAAGTATCCTTCAGGTGCGAC 1380495 28 100.0 32 ............................ GCCATTATTAGGGTCATTTGGATTAGGTTTAG 1380555 28 100.0 32 ............................ AGTAACCAAAATAGGATTAAATTTATGATTAT 1380615 28 100.0 32 ............................ TGTCGGGTCTGTTTCAGGCGTTGGGAGTGCAT 1380675 28 100.0 32 ............................ AAACAAAAGCGTTTTATATGTCAGAGCTTCAA 1380735 28 100.0 32 ............................ GATCTATTTTTAAATAAGTAGTCTGAAGATTT 1380795 28 100.0 32 ............................ TACGAAAGTACGTAACTTGTTCGCAATGTATT 1380855 28 100.0 32 ............................ TCGGTGTACTTGCGTTAGTACGTGCTGCTTTT 1380915 28 100.0 32 ............................ TAAGACCAGATGACTATTTTAAAAAAACAACT 1380975 28 100.0 32 ............................ ATTCACCGCCATAAAGGATATGACTTTTTATT 1381035 28 100.0 32 ............................ ACGTACAGGAAAATCACTAAAATCAGTTGAAT 1381095 28 100.0 32 ............................ ATTTTGTTAGAAATGCTCTTAATGATTAGGAC 1381155 28 100.0 32 ............................ TTTCCAATCCCTCTGAATACAAATTTCCAAAA 1381215 28 100.0 32 ............................ ATTAAGCCATTTTTGACAGTCGGATTGCTTGA 1381275 28 100.0 32 ............................ ATCTAACGAATTGTAATAACCATCAAATATAA 1381335 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 1381395 28 89.3 0 ..C......A...........C...... | ========== ====== ====== ====== ============================ ================================ ================== 27 28 99.6 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATAATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGATTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTCGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2804690-2803345 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024708.1 Acinetobacter sp. Tol 5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2804689 28 96.4 32 ...........T................ AAAACTTGTTATATTTGTGATGTTTTTAATGC 2804629 28 96.4 32 ...........T................ TGACTCAGTGAAATACAATGCCGTGGCTTATA 2804569 28 96.4 32 ...........T................ ATTAAAACTTTTACAAGGTCATAATGTTTTTG 2804509 28 96.4 32 ...........T................ TCAAGCAACAAGCAATTACGCACCTACAAGCC 2804449 28 96.4 32 ...........T................ TCCAGATTGCTTGAACGCCTCTTTTTCAAACT 2804389 28 96.4 32 ...........T................ ATTACGGTGTTGATATTGTCGAATATACCGTC 2804329 28 100.0 32 ............................ AGTTTGCAACCATCTCAGCATTTCTGCGATTC 2804269 28 100.0 32 ............................ TTCTCAAATTCAATCCATTTGTTATTTAGGGC 2804209 28 100.0 32 ............................ ATATCGGGAACGTACCTGAATTTGAGCTTGAA 2804149 28 100.0 32 ............................ AACTCCCCAAACTTCGCTAACATCAATATTTT 2804089 28 100.0 32 ............................ CTGAGTTATACCGTCACGGAGATGGCGCAGTC 2804029 28 100.0 32 ............................ TTTTCTCTGTGCTTCCAATCATGTGGCAACAT 2803969 24 85.7 32 .............----........... ACAAGATGGGCATATTTATGTGATTCGTAGTG 2803913 28 100.0 32 ............................ ACAGAAAAATCCTTTAATAGCTTTATCAATTA 2803853 28 100.0 32 ............................ AGTGAGTTCGCCTGCTGTTACTGAATGGGAAA 2803793 28 100.0 32 ............................ AATTGAGTTGATTTATCTACAACCTTACTAAC 2803733 28 100.0 33 ............................ CCAAACCAAAAATTATGAAAAATACTTTTAAAA 2803672 28 100.0 32 ............................ AGTAAAACTATTGGTAATTGAACTGGACAGCG 2803612 28 100.0 32 ............................ TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 2803552 28 100.0 32 ............................ ACATTCTGAGCCATCGTAGCCACATTAACGAT 2803492 28 100.0 32 ............................ TGCAGAAGACTATATAGACAAAACTGTCGATA 2803432 28 100.0 32 ............................ TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 2803372 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 97.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : CTGGATATACCTACCAAGATTTTTAAAGGGTTTACAAGTATTTTCAAAGACTTGTAAGCCTTTTTTTTATGGTTAGAATTTTGTTGTTTTGACTAGATTTATCAAAAAATCATAGAAATAATTACTAGACTTCACCAAGAATGCACCAAGATGAGGATGAATGAAGTTACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTAGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //