Array 1 114418-114584 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUCQ01000006.1 Butyricicoccus sp. AM18-35 AM18-35.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================ ================== 114418 35 100.0 30 ................................... GCGAGGTACTTGAACCGCGCAGGCGGTTCA 114483 35 97.1 32 .......................A........... CTGGGGCACACGAACTGCGTCAGCTGGTTCGT 114550 35 97.1 0 ....G.............................. | ========== ====== ====== ====== =================================== ================================ ================== 3 35 98.1 32 CCCTAACGGGCGGCACCTTTTTCTGCACCGGCTGA # Left flank : GTGCATCCAGATGGTTCAGCGCCAGCTTGCTCATCACCTCGGCGATTTCCTCGAGCGTGCCCGTACCGCCCGGAAAGGCGATGAACGCGTCTCCAAGCTCGATCATTTTGGTTTTGCGATCGGTCATATCCTCGGTGACGATCAGCTCGGTCAGACCGTCCAGCTGCAGCTCCTGCTCGATAAAAAAGCGCGGCTCTACGCCGATTACCTTGCCGCCTGCGGCCAGTGTGCTCGCCGCGACCGCACCCATCAGTCCGACCCGTGAGCCGCCGTAGACCAGTGTATGACCATGCTCGCCAATCCATGTGCCAAGCTCGCACACGGCGGTTTTGAGGGCAGGCTCACGGCCCTCGTTTGCACCCAGATATACGGTTATATTCATAATTTTGTCCTCCATTATACAGGTGTATGCAGAGTTATCGGCGGAAATGCCGGAAATTTCGATTTGTGAATTCAGCACCGGCTGAATGGGGCGCGCGAACTGCCGCAGGCGTGTTCGC # Right flank : AGCAGGGTACTCGAACTGCGTTAGCGGGTTCGCCCCTGACGGGCGGAGAGTTTTCCGCTGAACCTCAGCGGAGAGTTGCGCTCTGCGGAGCGCGGGAGAGTGCGGCACCCGCCGCGGGGGCAAAAAGGAAGGGACACCTGCGGTTTCCCTTCCTCTTTGGACTCCTACCTTTCCCTTGCTTCCTAATCTGGCGCAGATTTCCTATATGTGACCGCTTCGAAAAGGAGTACGACAGAGGATTTTTTCTTCCGTATTTTTCGCAACCTGTTCGCAGTGTCAGATACTGTACTGCTACACATATGATTTCATCTCCGCAGGCGCAACATACCCGTGTTGCGCAACTCTTTAGCACGTTGTAACACACGGCACCTACGAATTAAGCGTTTAGTACAATTTACCTTCGCAGACCCTGTCTATAACAACGTGCTAAAGAATCGCGCGGCACTGCTATGCCGCGCCTGCGGAGACCCTCCGATATGTGTAGCAGAACGGTATCCGGC # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTAACGGGCGGCACCTTTTTCTGCACCGGCTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 73827-72801 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUCQ01000005.1 Butyricicoccus sp. AM18-35 AM18-35.Scaf5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =================================================== ================== 73826 23 100.0 51 ....................... CTTTTTAAAATCCGTATTTACTCACATATGGAGATCTAATTAAAAACAACT 73752 23 100.0 47 ....................... ATCAATATTATATTCTCTTAAATCTTGACTAAGTATTAAAAACAACT 73682 23 100.0 48 ....................... CCTTCGGCAGTTACATAATCGTTGATGTGGTCAGTATTAAAAACAACT 73611 23 100.0 48 ....................... TCGTCGTTGCTGCAACGATCATACGCCTGTTCTTCATTAAAAACAACT 73540 23 100.0 50 ....................... TTAAAATCGCCTTGCCACGCCTTGGTCAGTCCGTTGTATTAAAAACTACT 73467 23 91.3 51 ......TA............... TCGTCGCAATTTTCAGCGACTCATCAGGGAATTTATTAATTAAAAACAACT 73393 23 100.0 50 ....................... TCTTTTGCACCGCTTGCGTTGCGTGTTCCGCGTTCCCATTAAAAACAACT 73320 23 100.0 48 ....................... TCTGTTGCGCCAATACGAGCATCAACCAATTCAACATTAAAAACAACT 73249 23 100.0 49 ....................... TCATTACCTCCACTCTGTCCAGAAACAACCCTCGCCATTAAAAACAACT 73177 23 95.7 50 ........A.............. GCAGGCGTGCACTTTTCTACCATTCGAATGCCTACGGATTAAAAACAACT 73104 23 100.0 46 ....................... TCTTTCTTACGCCTCGGTGTGTTGATGGTTTGTATTAAAAACAACT 73035 23 100.0 48 ....................... CGCCGGAACTCGGGAAAATACTGTCCCTCGAAAACATTAAAAACAACT 72964 23 95.7 48 .......A............... GGTTGAACCGGTCTACGATTAAGGCGTACAGGAGCATTAAAAACAACT 72893 23 100.0 47 ....................... TGCTCGAGCGTTTCGTTATACTCGGTAATTGCATATTAAAAACAACT 72823 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =================================================== ================== 15 23 98.8 49 AATCCCCGTAAGGGGACGGAAAC # Left flank : CAGAACTATGACAAGTGCTTTTTAGAGAAATTTCCCTTGAACGGGATCAGCGGCGGTGGTAATCTATATTTAGGCGGTGGCTGCGGTTATGTATCCAAAACGGTATCTTACCCGCTTCTGGGCGAGAACGGCGTGAAGCGGGTCAGTGAGATTATCGATTCGACACTGAATCGAGATGCAAAAATCAAGCATAAACACCGTGAGGATAAGAACAAGGGCGTTTCGCCGCATATGCTGAAATGCACTCAGTATGACGGCAGATTGTACGAAATGGGTGCATGCACCTTGTCAATTCAATAAATTTCCGCCGCAAGGTATTTCAAAGGGGATTTATATGCGTTATGCAGTTGATATAGCGCAAATTTGAAACAATTTTGTCGGTTAAAAAAGCGAACGCAAGATATTTTCGGGAAGAAACCGCTCGAAAATATTTTGCGCCGCAAACCGGCGAAAAACTCCTTGTGTGACGGGGGATTTTAAGGACAGGATTAAAAACAACT # Right flank : CAACAATCAAATGAAATTCAGCCGGAGCATTTTGGGCCGGATATAGAAGAAGGGACGAAAAATAATGTCTTATGTTTTGTTTACGCCTGTTGGCGGTCATGACCCGATTGCAAGTTTTCATGATGGTGCGGTGCTGCATATATGCCGCGTATATCGCCCGGAAAAAGTTTACCTGTATTTATCGCACGAAATGCTCGAACGCAGCAGACAGGATGACCGCTATCGCTTGAGCTTAGAAAAGCTGCAGCAGCAGCTGGGCTGTAAAATGGAAATCCATCAGATTGAACGAGATGAACTGACGCAGGTTCAGCTGTTCGATACCTTTTATACGGATTTCGATCAGCTGCTTCGGGAAATTCACAATGAAAACCCGGGCAGTACACTGCTTGTCAACCTATCTTCCGGTACACCGGCGATGAAGAGCGCACTGAATGTTATTTCTGTTCTGGCGCAGTATCCGATGCAGGCAGTTCAGGTATCGACCCCCAACAGACGGGAAA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //