Array 1 421124-423479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXYG010000005.1 Chryseobacterium lathyri strain EST11A NODE_5_length_515812_cov_38.0866, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 421124 46 87.2 30 A..A.AT...-A................................... GGTGCTCTGGGCTATGAAATACAGCTGCCA 421200 47 100.0 30 ............................................... GTCCTCACATAATTGCTCACTTAATGCGTT 421277 47 100.0 30 ............................................... GCATACGCTGTTTGATAGGGATTGCTTATT 421354 47 100.0 30 ............................................... ATGACTCCGAAACGTATACTCCGAAATCTT 421431 47 100.0 30 ............................................... ATGTCCCTTATATTCTTGTCTTCCACCCCT 421508 47 100.0 30 ............................................... TGGTAGCATCTTTATATGGTTTGTAAGGCT 421585 47 100.0 30 ............................................... GTATAATTTTCTACGGAAATACTTATTTCA 421662 47 100.0 30 ............................................... GCATAGCCTATGACTACGGATGGGAAGATG 421739 47 100.0 30 ............................................... TTTCTCCTGCAGCAACACCCATTTCATATA 421816 47 100.0 30 ............................................... TTTCAAACACCGCCGATAGTACTATTGATT 421893 47 100.0 30 ............................................... AAAACAAAAAAAGTGATAAACCTTGACAAT 421970 47 100.0 30 ............................................... GGTAATTAATTTTGATAACATTGTACTACT 422047 47 100.0 30 ............................................... TAGTATGGCTTAATAGTCCACTCCCACCAA 422124 47 100.0 30 ............................................... AACTAAGAGTGGTTTTTTTATGTCCTTTCG 422201 47 100.0 30 ............................................... TTGGCCAAACTTCATAAAACATCAACTTTA 422278 47 100.0 30 ............................................... TGAATCCGAATTATTCACAAACCTAGCTAA 422355 47 100.0 30 ............................................... TGATTCTCTCAACATGATGAGAGTATTAAC 422432 47 100.0 30 ............................................... ATCCAGTACCTTAGTACCATGTTCTACAAT 422509 47 100.0 30 ............................................... AGCCGTCGAGGTTGCTATATTGGTAGGGCG 422586 47 100.0 30 ............................................... GGTAAAGCACCAAGGTATGGCCACCGAATA 422663 47 100.0 30 ............................................... GCTTCGGCTAACGGCGTATGCAGAACAAAT 422740 47 100.0 30 ............................................... CACCGTTTTAGGTGTGGTAAAAGGAATCTT 422817 47 100.0 30 ............................................... TTTGTCCGTGAAATCAATAAGATGCACGGA 422894 47 100.0 30 ............................................... AATGGATCTAAGCTGCTTATCTTTCTTAAT 422971 47 100.0 30 ............................................... TGTAAACATACAGAACATCAACCATTGTCC 423048 47 100.0 30 ............................................... TACGGTAGCACCGTCGTTAAAAAGCGCTGT 423125 47 100.0 30 ............................................... CGATACTAGCGGCACCACGTGGGCTCAAAC 423202 47 100.0 30 ............................................... AAAGCAGTTTTCAATGCAAAATGGTACGTT 423279 47 100.0 30 ............................................... TTTGTCATAATTTGATATGTTTTTGACTCT 423356 47 100.0 30 ............................................... TAAAAACCTGGATTACGCAGAAGCTATCAA 423433 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 31 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTAGTGATTAGTCACAGC # Left flank : CAGAAGTAACAGTTTTAGTATCTGTATCCCAACTGCTAGAAACAACTTTCAGACCTGTTGAAAAATCAACTTTCAAATCCTTGAATGAATATCTACCCATTATTCGGGAGATTTCTTTTGTAGGTTCTTTCAATCTGAAATTTACACTCCCTGTTTCGTTGCTGTATCTTTTTACTTTTGCCATATACAAATATACTTAAAATTTTAAAATCAGTCACCTTTTTGGTCACCCTAATTTTTAAACATATTTAAATTCATTTGAATTCAACAAAACACAATTGTTTATTTATCAATGTTATTAAACAACAACAAAATATAATAAAGTATAAACAAGTACAACATGTTATACCCTGTGGGTCTACAATTTATTAATTAACCACTTGATTATCAAGTGGTTTTTATTTTCTTAGTTAACTACTAGTCAATAAGTTTATTTTTCAAAAGCAATTCTAGTATTTTTCCGTGAAATTGTCTAAGTGTCCAATCAAAATTTTCCTCTA # Right flank : CCTCAAAATTTAACCCACTGTTAGCCAGTGGGTTTATTTAATATTTAGGATTTAAAAATTAGAATAATTCCAGCTGCTGGAAGGTTGGTGGTGGCTCTTCTTTATTTCTGGCAAAAAAAATTTCAATGTCACCAAATTGTTTATCTGTAATACACATAATGGCTACTTTCCCGGCTTTAGGAAGCATAAATTTTACTCTTTTGATATGAACTTCAGCATTTTCCCGACTCGGACAATGGCGCACGTACATTGAAAATTGAAATAATGTAAATCCATCATCAATCAACGCTTTCCGGAAACGGTTAGCATCCTTCATATTAGCCTTGGTCTCAGTTGGCAGATCATATAGTACTAAAACCCACATAATTCGGTACGCATTAAACCTTTCGGTATTCATATCAATTCGGGATAAGAGATTAAGCGCTTTTCTCCCGTATAACATTTATAAAGTGAAGTAACTGTTGTTTTTACAGCTACCAATAATGGCCTGGTTTTATTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTAGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //