Array 1 222201-222900 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXU01000021.1 Serratia marcescens strain ML2637 ML2637_contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 222201 29 100.0 32 ............................. AGAGTGCGACGAGGCAGAGCGCAGCTTCTACG 222262 29 100.0 32 ............................. CCACACGAACGTTTTTCAAGTTAACTTTGATA 222323 29 100.0 32 ............................. CGACTCGTAGAGGTGAGGCTCTTTATTCACAT 222384 29 100.0 32 ............................. GCCAGCACTCGCCCTTATCGTTCGCGTTATCA 222445 29 100.0 32 ............................. ATCGTCAATTCCAACGGCACGCAGGTGATCGA 222506 29 100.0 32 ............................. TCCTTATAGTCACCGCTGCGGCTGGTCCACAC 222567 29 100.0 32 ............................. CGCCGGGCCAATGGGGCACGTCGGCAAATTCC 222628 29 100.0 32 ............................. GATTCGTCATTTTGATAGCGCATAGAAAACTG 222689 29 100.0 32 ............................. ATGTGGCCGCTGCTGCATGACCTTGCGCTGCA 222750 29 100.0 32 ............................. TCCTTATAGTCACCGCTGCGGCTGGTCCACAC 222811 29 100.0 32 ............................. CATCGACGCAGCCGGACGTCCATCCGAAAAAC 222872 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 100.0 33 GTGTTCCCCGCGAGAGCGGGGATAAACCG # Left flank : AAGCTGGTGACCGAGTGCCTGCGCAGCGTCGAGATGATCTACCTGACGCTGGCGTTCATCACCACGCCGATCTTCTACCTGTCCGGCACCATCTGGCCGCTGCAGTCGATGCCGGCCTGGGTGCGCGCCATCTCGTACAGCATTCCCTCCACCTGGGGCACCAAGGCGATCGCCGGCGTCAACCAGATGGGGCTGTCGCTGAACGAAGTGTGGGGTGACGTGATGATGATGCTGGTGCTCGGCGTGGTCTACACCCTGCTGGGCTTCGGCGTCGGCTTCTTGCGCAACAGCGTGGCGCTGCGCGGGATGTTCAGGAAGCGACGGGCGTAGGGGGGAGTATCTTGTTGTTATAGCGTGAAAATTCGGTGATTCTGCTTTATTGCTATAGATGGTTTTTTATTTATTAGATTTCAAAGAGTTATGTGACTGCCCCGATGCTTAAATCGCGGTGAAATCTCGTAGATGTTGAAATCCATTTAATTCAATTAGATATATTTATA # Right flank : GGGCGCGACAACGAAGCCTACCGCGGTATTAGCGTGTTCCTTACGCAAGTGTGGGAAAGTAAACGCATCAAGAGATATAATAATTCAAATGAAATAATACCATGCTAATTATATTAAGTGGTATAAGGAGTTTTTGTCTTATTTAAGAAGCTATATGAAATTTAAATTAATATCATTGCGCTTTGATTTTACTGTTGTGAGCTTAATTGGCTTTTTGTGTTTTCGAATAAAATATAAGTACCTTTAGCCTGATGGAAGTGCTAAAGATAACAAGGCATTATTTATATCTAAACGGGATTGTTTATGGGAAGTGATATCCCTGACTATATGCGCTACTGGGGAAAAGCAAAAAGAGCTGACTTACCCGGAGAGAGTGACGATTACCACCTATTAGCTTATCACTGCCTGGATGTTGCTGCTTGCGGGTACCAGATGGTGATTGATAATCGTTTTCATGCCGCCGATATTCTGGCAGAGATAGGCTTCTCTCGTGCCGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 232499-233443 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXU01000021.1 Serratia marcescens strain ML2637 ML2637_contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 232499 29 100.0 32 ............................. GGCAACACGTCAAATATTTACCAGTTGACCTT 232560 29 100.0 32 ............................. GATTGCGCTATGGAGCGTTTCGCTATCGAGCA 232621 29 100.0 32 ............................. CTACCTGACCGTCAGCTCCACGAAACGGAGCA 232682 29 100.0 33 ............................. CATATCGCCTGCTGCGCGACCCTGAAGAGCTGC 232744 29 100.0 32 ............................. CAGGTGTGGACAAAAGCGCGCTTAGCGTGGTC 232805 29 100.0 32 ............................. GGTTGTTGTTGTCATCGAGCAGCTGATATTCA 232866 29 100.0 32 ............................. GAAAACCACAAAGACCTACGGCAGATAGGCAA 232927 29 100.0 32 ............................. CGCTTTATCAACCTGACCGGCACCCCGTCACC 232988 29 100.0 32 ............................. ATACCGGAGATAGCGCCGATCACGGCTTTACA 233049 29 100.0 32 ............................. CTGGGAGTATGATCCGGAGGAATGGCGTGAAG 233110 29 100.0 32 ............................. CTCGGGAACAGCAAGTGAATGACTTTCGAGTT 233171 29 100.0 32 ............................. TCTTCAATCGATTCTTCGCCAATGATCCACGC 233232 29 100.0 32 ............................. GTCTCGGTAAGGACTACCGCAACGCCGATTAT 233293 29 100.0 32 ............................. CTCGGGATCGGGCATTGAAAGAAGTTCGCCGA 233354 29 100.0 32 ............................. GTGCCAGTCTTTATTGCATAGCAGACTGAGGA 233415 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 16 29 100.0 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : TTGATTGAGGAGATTCTGGCTGCGGGGGAAATCGAACTCCCTAAACCTTTTGAAGATGCGCAGCCCCCTGCGATTCCTGAACCTGTTTCGTTAGGTGATGCGGGTCACAGGAGCCGTAACTGATGGGCATGCTGGTTGTCGTGACGGAAAACATCCCTCCCCGGCTACGAGGCCGGTTGGCCGTGTGGCTATTGGAGGTTCGGGCGGGGGTGTATGTCGGTAATACCTCGCGTAAAGTCCGTGAAATGATCTGGCATCAGGTTACTGCCTTGGCGGGGGAAGGTAATGCCGTTATGGCTTGGGCGATGAATAACGAGTCCGGTTTTGATTTTCAAACATGGGGAGAAAACCGACGTGAGCCGGTAGATCTCGATGGGTTAAGGCTGGTCTCTTTCTTCCCCATTGAAAATCAGTAAGTTATCGATCTTTAAAAATATGGAAAAGTTGGTGGAATTTTAGAGGCTTAAAAACTCAAGTTATAACAATTAGTTAATCTTAGA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-4370 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXU01000034.1 Serratia marcescens strain ML2637 ML2637_contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1 29 100.0 32 ............................. CTGGGGGAACAGCTGGGCATTGATGCCGGAAC 62 29 100.0 33 ............................. GATGGATTCAGACCTGTGCTGGTCTGGCACTGC 124 29 100.0 32 ............................. CAATCCGGTAGAGAGGTGGATGGGGTCGACGT 185 29 100.0 33 ............................. CAGTGACTTCCCAGACGTCATTACGCCATCATC 247 29 100.0 32 ............................. GGACTAACTTCGGGCGCACGGACTTCCGAACA 308 29 100.0 32 ............................. GTCAGATTGCCATGAGTGACACGGCAATTATC 369 29 100.0 32 ............................. GCTCACAGGCTTCCGCCCATGCGCCTGCCTGA 430 29 100.0 32 ............................. ATTAAATCCATTCAGGGCGTCGGCATCTGCTG 491 29 100.0 32 ............................. ATAATCGACGGAATAAACAGCATTTCTGACGT 552 29 100.0 32 ............................. GAATTCCCAGTGTAGTGTCATACCAGGGCTCA 613 29 100.0 33 ............................. AATAATCGTGCCAGTCAACAGTTTTAGTTGTGC 675 29 100.0 32 ............................. GGCATTGTCTCCGTCCTCGTTTCTGGGGATTG 736 29 100.0 32 ............................. CCAGCGTGGTAGCGTTACTGTCCTCACCCTCG 797 29 100.0 32 ............................. TTCAGCTGGCCGCGCTGGGGGATATGACCAGC 858 29 100.0 32 ............................. AGTTTTCCGGTTGCAGGATTGGGTGCGCAACG 919 29 100.0 32 ............................. GCGTCGTTTATTGCTGCCGGCGTGGTGACGTC 980 29 100.0 33 ............................. TTGGCGTGGCGCGTATTGCGGCTTTCGGTAGAC 1042 29 100.0 32 ............................. GTGTCGCCGTCCGTCACATCGTTGGGCTGAAT 1103 29 100.0 32 ............................. GCCGCCAGCCAGCGAACTGGTGATTTCCTGCC 1164 29 100.0 32 ............................. CCTCGAAAATCTGCGCCAGACCGGCAACGACG 1225 29 100.0 32 ............................. GGCGCAGATTGCGGGTGACCGTGGAAGTTGTT 1286 29 100.0 32 ............................. TCGTGGGCCTTTGTTCCCATGCCGCCCTGCCC 1347 29 100.0 32 ............................. ATGGAACAACTTGCCAACATGCATCCAGACAC 1408 29 100.0 32 ............................. CGATTACTATCAGCAGGCAGCAGATGCTATGA 1469 29 100.0 32 ............................. CACATCGATCGGGTTCTGGCGCATTTCTGCAA 1530 29 100.0 32 ............................. CCAATTTCTCCAGCTAGCTCCTAGTGACCTTT 1591 29 96.6 32 ............................A TCGGTGACATTGTTCACGCGCATGGTGCGGTC 1652 29 100.0 32 ............................. CACTCGCCATGCTCATAACCATCACGCAGGAA 1713 29 100.0 32 ............................. TGAACAGCTCAGTTTCAGCTTATCGCTTCGTT 1774 29 100.0 32 ............................. TTAGTACCGGTTGAGGCAACCGAAGACATGAT 1835 29 100.0 33 ............................. AGGATCGGGCATTCGAACAGTGGTATCGCAGCC 1897 29 100.0 32 ............................. TTCTTTGTGCTCCAGTTCTGTTTTACCGTCGC 1958 29 100.0 32 ............................. CCCCTTCAAATACGAATATGTCGCGGTAAACC 2019 29 100.0 32 ............................. AAAATTTCAGGGCCATATCCTGCCAGCGCAAT 2080 29 100.0 32 ............................. CTGTATCCCGGCCGTGAAATCCTTGTTTCCCC 2141 29 100.0 32 ............................. GTTTGCACGCCGGGCTGAGCCGCTGTAGGTAT 2202 29 100.0 32 ............................. CCTTCCCAGGCGGAGTCCAGCTCCTTCAGGTC 2263 29 100.0 32 ............................. GCATCAGGAACCATTAGTAAGGTGAGCGAATT 2324 29 100.0 32 ............................. TCTGGGAGCGCGTCCGCGTGTCTATCGGCATG 2385 29 100.0 32 ............................. TGGTGCGCTCGGCAAAGGTCAACGCCGGGCAA 2446 29 100.0 32 ............................. AGCTGATCGCCGAGCGCAGCCCGGTGCTGCGT 2507 29 100.0 33 ............................. CGCTACGACAAAAAATATGGCATCAACAAAAAC 2569 29 100.0 32 ............................. GTGCCGGCGGGGTTTCCCAGTCCAGCGGCAGA 2630 29 100.0 32 ............................. CGCGTGCCGTGCATTTGCTGGATTGGCTTTCA 2691 29 100.0 32 ............................. CACGATGTCAGCAGCAGGCTTGATGATTTCCA 2752 29 100.0 32 ............................. TGGGCCGAGCGCCGCGGCTCGCTGACGTGGCT 2813 29 100.0 32 ............................. TTTCCGAACGTCTTCTGCACCATCGTGCCATA 2874 29 100.0 32 ............................. ATATTCCCGGCCATCCAGCACTGGCGCAGGGT 2935 29 100.0 32 ............................. CAGAGCGCAATGATCTGGCTATGGGCCATATT 2996 29 100.0 32 ............................. CACCGCAAAGAAGAGGAATTCAGTTCCAACGG 3057 29 100.0 32 ............................. GATGTGGTCAGCGGTATCAATGCCAAGCTGCA 3118 29 100.0 32 ............................. CCGGCCCGATCTGGTGATTCCTCGGCGCGCAC 3179 29 100.0 32 ............................. TCGAAAGCCTACTCGACGAACACATCATTAAA 3240 29 100.0 33 ............................. GCAACGTCCGATACTGCTGCCCCGCCCCCTGTC 3302 29 100.0 32 ............................. ATGTTTACGCATCCGTTAGAGGATGGCGTGAG 3363 29 100.0 32 ............................. CGGGAACGAGTTACCCGCCCCACCCACGAACC 3424 29 100.0 33 ............................. CATCGGCGTTGTTTTGCACCGCCAGATAGCCGC 3486 29 100.0 33 ............................. CAGATAGTCCAGATGCCCCCGCCGTCCTGGTAC 3548 29 100.0 32 ............................. TTAATGGCCTGGGCGGTATGGTTTGCCACACG 3609 29 100.0 32 ............................. ATTGCAGACAGTGAACTAGCGTTCCTAGAATC 3670 29 100.0 32 ............................. GATGCAGAAAAATGCTAATCCTCATCACAGTA 3731 29 100.0 32 ............................. CCAAAATGACGAAGGCCAACCGCAACGAGCGG 3792 29 100.0 32 ............................. TTGATGGATGTTGCATCGGGCGCTTTGGAGGA 3853 29 100.0 32 ............................. GCACGATTATCGCGCTATTACGGGCTGTTACA 3914 29 100.0 32 ............................. CGAGCCGGTCAAGGTCAAGCGCCGCCGCAAGA 3975 29 100.0 32 ............................. CCCATGGTCACGAACTCGGCCGCGATGCCATT 4036 29 100.0 32 ............................. GATTTTGTGACCTTTTTCTTGCCTGCGGCCTT 4097 29 100.0 33 ............................. GCAGGGGTGGATGATGGCGTTGCAGTCCTCCTC 4159 29 100.0 32 ............................. CCTACACGGTTACGCACGATCTCCAGCTGGCC 4220 29 100.0 32 ............................. CTGGCTACGCCGGTGCGGTTGCCGCCGGTTCA 4281 29 100.0 32 ............................. TTGATAAGATCGCTGTTGATATCGCACAGCAG 4342 29 82.8 0 ............T.........GG...AA | ========== ====== ====== ====== ============================= ================================= ================== 72 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : ATTGAACGCTCGCAATCACATAGGCAGCTTTGAAATGCAGGGGGAGGAAAAAACCACGTAATGAAATCTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCTAGCGTCAGCTCCCCTTTACCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGTGGGGCAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAAACGACATCAGGCCGCCATAGCCAAGCGCGGTATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCTGTCTTGACGATAAAGGGTTATTTTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-1372 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXU01000104.1 Serratia marcescens strain ML2637 ML2637_contig_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. TTTCGGGAATGCAAAGTACAACACTTCATCCC 62 29 100.0 32 ............................. CGCCTCAAAGAGGCTGTAAAGCCTGCTGAGCA 123 29 100.0 32 ............................. GGTGTGCCTTCTGAAGCATGGGAAGCTTTCGA 184 29 100.0 32 ............................. CATCCCGAACCTGACCAATTTCACGCTGACAA 245 29 100.0 32 ............................. AAAGTCAACGGCAGCAATGTAAAGAGGCGCAA 306 29 100.0 32 ............................. TACAGAGCGAGGCTACCGCTGCAGTCGACGAC 367 29 100.0 32 ............................. CTTCGGTGGAACACATCGCTGGTGGCTGAGAA 428 29 100.0 32 ............................. CCGACAGTCAGCCCCTGTTCGAAGCGCACAAC 489 29 100.0 32 ............................. GGCTGTTTGAACCGAAGAAAAACGGCTCTCAG 550 29 100.0 32 ............................. TACGGCACAGATATCTGCTGCAGCTGCTTATC 611 29 100.0 32 ............................. TCAATTAAATACATTTACTTTAACTTATTTCA 672 29 100.0 32 ............................. GCCATCATCGCTTTGGATTTGAATCTCGTACC 733 29 100.0 32 ............................. CGCTGGTTGATATCGATCTGGATCAGTTCGCA 794 29 100.0 32 ............................. ATCACCCTGATTTACGACCCTAAACTGCAAGA 855 29 100.0 32 ............................. CGCATGTCGTGCATTTGCAGGATTGGCTTTAA 916 29 100.0 32 ............................. GGCTTAAAAAGGCCGAAAGCACCAACGATAAG 977 29 100.0 32 ............................. AAAAGGATTTTGTTGAAAACACTGCCAAGAGA 1038 29 100.0 32 ............................. GAGATGGCCGGATCCCTTGGTCGCATGACCGA 1099 29 100.0 32 ............................. CTGCTTATTCCCCATGATCGTTACCGTGCTGG 1160 29 100.0 32 ............................. GACTACGCCGAGCGGTGGCGCCGGCACTCACA 1221 29 100.0 32 ............................. CAATTATGCCTTGTACGGCGACATGTCGGCAC 1282 29 96.6 32 ............C................ ATTATGTCCAGAAGTGGTTAGAGGAACAGGGA 1343 29 82.8 0 ............C............CGAT | C [1364] ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.1 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : | # Right flank : TTTTTATTGGACTATGTGCCAAAACAATCATTCATCAGTGGCTAAATACCGGCGGCATTTAAAAGTAAAACGCTCTCATATCACCCCACCAACTCCAGCCCCGCCACGCGGCGCCAGTAGCCGTTGCAGTCGGCGTGGTCGGTCAAGGCCAGCGGCTGCTCGCCGCGTTCGTTGGCGCGGAAGGCATCGATTTGCGCCAGTGTCTCGGCACCCTGCGGCGACAGCCGCACGATGTCCACCAGTCCCTGCATGCTCGGGAGCTCGTTGCCGAGGTTGTAGCAGTAGCCGCTCATGGTCTGGATGCCGTTGAGCACGAACACCCGCTGCTGTTCCTGCGAGCGCATCATGCGGCCCTGCGGATACTTGATGCAGCAGGTTTCGCATTCGTCCTTGCCGCGGTTTTCCGAGCGGGCGGTGAAGCAGCGCGCCGAGTAGGCCAGCGGCAGGTGGCCGTAGCTCAGCACCTCCACCTCGAAATCGTGGCGGAAGCCCAGCTCGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //