Array 1 298100-301728 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJFL010000002.1 Pseudoalteromonas sp. SG41-1 NODE_2_length_397519_cov_9.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 298100 29 100.0 32 ............................. ATTGACAATAGGAACCTAGCCATGCGTAATAT 298161 29 100.0 32 ............................. GCAGCATATTATTTCTGACTTACTACCCGCAA 298222 29 100.0 32 ............................. CGATTAAACCACTTGCAGACCAACTAACCGCA 298283 29 100.0 32 ............................. TTTTCGTTGTAGCTGTTTACGTGGTTAAGCTC 298344 29 100.0 32 ............................. AAAACGACCGTCTTGAGGGGTTAATTAACGCC 298405 29 100.0 32 ............................. TATGGCCCCAGTAGTGTCCTTAGCATTATAGT 298466 29 100.0 32 ............................. TATTTGTTCGTAACTGGTGTTTTTTTCAATCG 298527 29 100.0 34 ............................. GAAAAAGCATGGCAATAGCCAGCGCTATACTTAC 298590 29 100.0 32 ............................. GCGCAAATGCCAACCGGGGAAATAGTTGTACT 298651 29 100.0 32 ............................. ACGCCCTAAAAAAGCTCAGCATAGTCGGCAAA 298712 29 100.0 32 ............................. AGATAGATAATTTAACGTCAATTAATATTATT 298773 29 100.0 32 ............................. CTGATAGCTGAAAAGTACGGTTTGCCGCTTGA 298834 29 100.0 32 ............................. GTGTAGTTTTCATTCAAAATGTAGCGCCGGTG 298895 29 100.0 32 ............................. TTTGGTACGTGGCCTGTGTTTAGTTGTAAAAA 298956 29 100.0 32 ............................. AGTGCTTAACGAATTATCAGGCCAAAACGGTA 299017 29 100.0 32 ............................. CAATGTTCGAGTATTAATTTCAGTCAGTCCGT 299078 29 100.0 32 ............................. AATCTGAACCTGTTGAGAAAGCTAAGGCTGAA 299139 29 100.0 32 ............................. AAAATGAAGTAGGTGGGTTCTTAAATCCAATT 299200 29 100.0 32 ............................. AAAATTGGGATGACTTAAACAAATACGCCATA 299261 29 100.0 32 ............................. CTTGACGTTCTTGAAACGCAGACAGATTACAA 299322 29 100.0 32 ............................. CAAAAAAACTAGCACGAACACTGACACCACCA 299383 29 100.0 32 ............................. ATTCAAAAAAGTCATTTGATAGCTCACTGAAC 299444 29 100.0 32 ............................. GCCATAAACCCCATGTGTTACCTACGCCCTTT 299505 29 100.0 32 ............................. CTAAACAGCTTTGTTTCATCTATAGAGTTATC 299566 29 100.0 32 ............................. GTGATTAAAATGTTAGATACTATTCAATTCAT 299627 29 100.0 32 ............................. CTGATACATTTATACCGTCAATTAATACAACG 299688 29 100.0 32 ............................. AAATAGACTTTAATCATTTAATAAATAAAGGA 299749 29 96.6 32 ..................A.......... TACGGGTGTTAATTTCAGTTAGACCATCAGTA 299810 29 100.0 32 ............................. TGTTAGCGTTAACGATATGTTTGTCGATGAAA 299871 29 100.0 32 ............................. CAGGGGTCTTAACTATGCTTAACAATATAAAA 299932 29 100.0 32 ............................. AGCGATGATTGATTTCCAAATTGCTCCCCTAG 299993 29 100.0 32 ............................. CCTACACTGATGCGTGTCATGGGTGTAACAGA 300054 29 100.0 32 ............................. TAGATTGTCGATATTAACGCCGAGTGACGTTA 300115 29 100.0 32 ............................. TTGATATAACAATAGATAATTTTAGGGGTGTT 300176 29 100.0 32 ............................. CGTTAATATTGCTTACTATTTAGCTAGTGGAG 300237 29 100.0 32 ............................. CGAAGAGGAGGCTTTGAATTGTAAATCCATAG 300298 29 100.0 32 ............................. TGATCACCTGATTTAATCCAGCGGTATAGCGT 300359 29 100.0 32 ............................. ATTACATCGCTGAAAAAGAAGTGCCTACAAAT 300420 29 100.0 32 ............................. TGTGAAATAAGTTCCAAAAACACCCATCGCGC 300481 29 100.0 32 ............................. GCCTCCATTTCATCTACATCTCTGAGTGAAAA 300542 29 100.0 32 ............................. CTCATTTTCAATTTTTTCATTAAATTTATTTA 300603 29 100.0 32 ............................. CATGGAGACTGCATCATTAACAAATTTAGTTG 300664 29 100.0 32 ............................. TGATGATGCAAGTAGCTGCCATCATTTGTCGC 300725 29 100.0 32 ............................. GTTTGGCTCAATCAGCGTTTAAACCTGGTCAG 300786 29 100.0 32 ............................. CCTATGCAATACTTGAATCATTAGACTACGAG 300847 29 100.0 32 ............................. CGCTTAATGAATGAGCGAGACAATGTTTGCGG 300908 29 100.0 32 ............................. TATGCTGCCAGTGGGTTTGTGCATTTTGGCAA 300969 29 100.0 32 ............................. CTATTTGCAGTTGATGCGGTTATAGTTAATGG 301030 29 100.0 32 ............................. AGAGTCAGCCAGCTTACTGATTGAATTAGCCT 301091 29 100.0 32 ............................. ACGTTGAGGGGCTTGATCCTATCACCGCCTAT 301152 29 100.0 32 ............................. TCATTGCTCGGATGGTTGATTAACTTCATTTT 301213 29 100.0 32 ............................. AAGTCGAGCAAACACTACAAAAGATAAAAGAA 301274 29 100.0 32 ............................. GATGGGTGATGTTGCGTAGTTTATGAATTTAA 301335 29 100.0 32 ............................. AATATTTAACATACAAAAAGGCAAGTGAAGCA 301396 29 100.0 32 ............................. CTGTTAGTTAAAGAGCAAAAACAGTTTCAAAG 301457 29 100.0 32 ............................. TCATCGAGCTTACTTGTGCCGCCCGCTTCTTT 301518 29 96.6 32 .............C............... CAACAATGAAAGCCAATGCTGACACGTCAGGA 301579 29 96.6 32 .............C............... CCCTGCGCTTGTTGCCCAAGCTCTAGCCCTTG 301640 29 96.6 32 .............C............... TACCAGAGGCTATCTGTTCTTTTTATGAAAAA 301701 28 89.7 0 .................-........TT. | ========== ====== ====== ====== ============================= ================================== ================== 60 29 99.6 32 GTGTTCCCCGTACTCACGGGGCTGAACCG # Left flank : ATTAAGCGCTGGTGAGATCACGCCACCTAAACCATATGAAGATGCCCAACCGCCAGCACTACCAGAGCCTGAATCTATTGGCGATGACGGGCATCGCACTAATTAGGAGTGGATTATGAGTATGTGTGTTGTTGTAACTGAAGCTGTACCACCCAGATTAAGAGGGCGATTAGCTGTATGGTTACTAGAAATTCGCGCAGGTGTATACGTTGGTGATGTAGGTCGAAAGATTAGAGAAATGATTTGGTTTCAAGTCTCTGAGTTGGCAGAACAAGGAAATGTGGTTATGGCGTGGGCTACAAATACTGAATCGGGTTTTGATTTTATTACTTATGGTAAAAATGCACGGATGCCTATAGATTTAGAAGGATTAAGGCTGGTCAAGTTTACACCAGTAAACAACGAAACATTAAGCTAAAAATAACTGTTACGCTCTTTAAAAATTTGGTAGATTTGAACTAGCTGTTTTTATTTATAAAAAACAAGCATATACTATTAGA # Right flank : GGTGAATTTAACTGGCTAAGATTTCACTTGCTGAAGTGATCATTTTGCGTTGCGGGTGACATTTCGCGCTAAAGCACGGCCTACAGTACAGGACATTTGGAGTATTGTTGAATTTATAAAGGGAGGGGTTAAGCAACATGTAATACTTTGATTTGTCGCGAGGTAAACTCGCTGCTACGAATACATGGCTCTAATGCTCTTCATCAAAGATTTGAATTTGATTGCGGCCTGATTTTTTTGCTACGTAGAGTGCGCTGTCGGCGGCGAGGATCATCATATCTGCGGTGGTATGTTTATCTGGTGTACAGCTGTAACATCCGATGCTGAGGGTGAGGTGGTCGGCGATGTTTGAATTTGGGTGCAGGATATTTAGTTGACTGATTTGCTGTTGCAGTAATTTGGCAAATTTTAAACAGTGGGTTTTATCAATGCTGGGTAACACAATTGCAAATTCTTCTCCGCCGTAGCGGGCTGCTAAATCACCTTGTCGCTTACATAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACTCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //