Array 1 1173172-1176383 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024418.1 Acinetobacter baumannii strain A388 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1173172 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 1173232 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 1173292 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 1173352 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 1173412 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 1173472 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 1173532 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 1173592 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 1173652 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 1173712 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 1173772 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 1173832 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 1173892 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 1173952 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 1174012 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 1174072 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 1174132 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 1174192 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 1174252 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 1174312 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 1174372 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 1174432 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 1174492 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 1174552 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 1174612 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 1174672 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 1174732 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 1174792 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 1174852 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 1174912 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 1174972 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 1175032 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 1175092 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 1175152 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 1175212 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 1175272 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 1175332 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 1175393 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 1175453 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 1175513 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 1175573 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 1175633 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 1175693 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 1175753 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 1175813 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 1175874 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 1175934 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 1175994 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 1176054 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 1176114 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 1176174 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 1176234 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 1176294 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 1176354 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //