Array 1 1240641-1243968 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022468.1 Vibrio anguillarum strain MHK3 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1240641 28 100.0 32 ............................ CGACGTCCAGCTCATCAAGCGCGGCAAAGTTA 1240701 28 100.0 32 ............................ CATAAATGAGAAGCCATCGCCCATCACGATAC 1240761 28 100.0 32 ............................ TGTACAAATTCGGTAACTCAAATGCTTAGTAT 1240821 28 100.0 32 ............................ TTTTGTGCTTCGCTTTTCGCAATACTGTTGCT 1240881 28 100.0 32 ............................ GCTCAAAACGGCACGAAGCATTAAACAGTCAT 1240941 28 100.0 32 ............................ GCTCAATGAGCTAGATTTTCCGATGTACACTA 1241001 28 100.0 32 ............................ GACAGGCGACACATGCACTTCAACGTGTCTAG 1241061 28 100.0 32 ............................ TGCAATTGATTACGTGCCTTTCGGTGAGATCA 1241121 28 100.0 32 ............................ TGTCAGAGCGTGAAATTTCACCGACTGGATTA 1241181 28 100.0 32 ............................ TTAAAAGCTTCGCTATAGGAGAAAACCTCATG 1241241 28 100.0 32 ............................ ACACAGATAAGATTTATTCTTTCTTGACGACA 1241301 28 100.0 32 ............................ AAGCAAAACGATCACCCTTTCTATGCAGAATG 1241361 28 100.0 32 ............................ ATGGCAGAAAATACCCGATATCATTAACGCTA 1241421 28 100.0 32 ............................ GAATATGTACGCCTCTGCCTCTGGTTGCACTC 1241481 28 100.0 32 ............................ AGAAAGTTAAGTCACGATTCATTTCCGCACCG 1241541 28 100.0 32 ............................ ATTGATGCCGCCCTTGGACTTGTGTCAATAAC 1241601 28 100.0 32 ............................ TGTTAGAAACGGACTTTTCCGCAAGCTCAGCA 1241661 28 100.0 32 ............................ ACCGAGAACGTGAGGCGTAACCTCAAGCGTGA 1241721 28 100.0 32 ............................ GGACGTGGCCACTTCCATTGCTTTTTTAAACA 1241781 28 100.0 32 ............................ AGCAAAAACGCCCTCGGGTACGTGGAAATCTC 1241841 28 100.0 32 ............................ AATGATCCAAACCTTGGCGTACCCGCTCTAAA 1241901 28 100.0 32 ............................ TGCCTTTGCTCATACGCAGCAAGGGGTAGTTG 1241961 28 100.0 32 ............................ CGGTGCAGAGCGTGACGCTATATTGACTGGTC 1242021 28 100.0 32 ............................ GTGTAAGCAAAAGCGGTGAGCAAGAAATAGAC 1242081 28 100.0 32 ............................ ACGTTGTCGCCTTTGAACTCATGCCAGATAGA 1242141 28 100.0 32 ............................ AAATAGCAATGGCACTATCGCCGTGTCGTTTG 1242201 28 100.0 32 ............................ TGTTCAGCCAAAGACATTACAGTCCTTGGATT 1242261 28 100.0 32 ............................ GTACTCATTAACAAAAAAGAGTTTCGTTATTT 1242321 28 100.0 32 ............................ TGCTCAGCCCAATCATTCAGGAAATCGTCATT 1242381 28 100.0 32 ............................ GCAGTAGGGAAATGCGTTGCTTTAGGGTTAAA 1242441 28 100.0 32 ............................ ACCAAGGTTTTTGCGCATCAAGAAAGCGGAGA 1242501 28 100.0 32 ............................ TGCTCTTTGCTGAATGATTCGCCACGCGCGCC 1242561 28 100.0 32 ............................ ACACCCACAGAATAGACGTACAGGTTAATGGT 1242621 28 100.0 32 ............................ CATTGGTTAATTTCGGGCTAAGTGGCGATTGC 1242681 28 100.0 32 ............................ GTCAGAGATAGAAGGTTGGGAGATTCACTTCT 1242741 28 100.0 32 ............................ TCTTGAAAAACCTTGCTATACGCGCGACAAAC 1242801 28 100.0 32 ............................ ACGGCTGTCTAACTACAGGATTGTAATTATGG 1242861 28 100.0 32 ............................ GCGCTGCGTTGTTGCGACACACATTCGCAATG 1242921 28 100.0 32 ............................ CGTTAACGATTCAGCCGCGACACCTGATAGCT 1242981 28 100.0 32 ............................ AACCGACTGACTATCACAGACCATGCGTGGCT 1243041 28 100.0 32 ............................ AATTAAAAACGGAGGAAGAACAACTTACTTCC 1243101 28 100.0 32 ............................ AAATGTAGAAACGCATTTTTGGAAAGGAAAGT 1243161 28 100.0 32 ............................ GGATCTCTAAATAGGTCGCCACCACGAATCTC 1243221 28 100.0 32 ............................ AAAACACAATCAAGACATGTACAAAAAGATTT 1243281 28 100.0 32 ............................ ACTCATTGTGATGATCGCTGCATAGCCATCTA 1243341 28 100.0 32 ............................ CATTCAACGCACCAATCGAAACGCCAACAGCT 1243401 28 100.0 32 ............................ TTTCTAAATGGTATTGAGTTTCTATTGGTAGT 1243461 28 100.0 32 ............................ ACTTGAGATCTCAACACTTGATAAGCTTGCGA 1243521 28 100.0 32 ............................ AGCGCACCGTAAAACGCACTTTTCATAACACT 1243581 28 100.0 32 ............................ GTCGGACCACCATTCACAGATACTGGCAATGG 1243641 28 100.0 32 ............................ ACTAACAAAGGAAGAACTGAGAGATGCAAATA 1243701 28 100.0 32 ............................ AGTCATTACAGCATGGTGATGTAAATCATAGA 1243761 28 100.0 32 ............................ TCTATCCGTTGAGACTGAAGTGCAACCTCTGT 1243821 28 100.0 32 ............................ GATAAAACCTTTATTAGTAGCGTAAATTTTTT 1243881 28 100.0 32 ............................ TTTTCTAAAATTTATGGTTGACATGGTGATGT 1243941 28 96.4 0 .....T...................... | ========== ====== ====== ====== ============================ ================================ ================== 56 28 99.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTCAGCTTTGCACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCCGCAAAATCTGGTAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTACCGTTTATTTACTTGCATAGTCAGCAAACCAAGCAGCGCTCACCAGATAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTTAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : AGCTAGTGATCAAATATGAGACGGATGGAGCTAGCGAAACACACCAATCTGACCTAAGAAATAGGTATCTCTGCCTACTTTTTTGAGTTTGGAGTATGACAGAGAAAGAGAAGTACATTCACAAATAGTTAATATTGTTATAATTCTGATACCTATAAAAATTAGGCTGTCAGCGATGTTAGCAGCCTAATTCACGATTAATGTTATTGACTAGCTAGTTGCACAAATGGAAAAGTTCCCCTTCGATGCCTCCTCGATATAGTTACTCCACCAGCGTAGCATTTCTCTACGTTGGTTAAGATATAAAGCCCGGTTGTAAATACCACGAATTTGGTTTTTGTCCACGTGAGCTAGTGCTAGTTCAATGACGTCATTATGAAAGAGTTTAGTTTCATTTAGCGTAGTGCTAGCTAGAGCTCTAAGACCATGGGAGACCAAACGATCTTTAAAGCCCATACGTTTAAGGGCAATGTTAGCCGTTTGGCTGTTACTCGGCCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //