Array 1 455243-461177 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015381.1 Desulfococcus multivorans strain DSM 2059 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 455243 36 100.0 36 .................................... ATCCCATTCTTCAGGATGAAGTCGGGAGTGTAGGTT 455315 36 100.0 35 .................................... ATCTTAGTTAAAGCTGTCCAGGTTATGGACTTCAT 455386 36 100.0 34 .................................... GCGTTGAATATCCCGCTCATGGCGCTCGTCATGT 455456 36 100.0 34 .................................... ATGCTATCGGGGAGAGGCGTCTGTGTGTATCCGT 455526 36 100.0 35 .................................... CCGTGAAGGACGATTCTTGGCGGCTTGTTCTTAAC 455597 36 100.0 35 .................................... CGCCGTTGCATATTTAGGTACGAAGGCCGTCGATC 455668 36 100.0 35 .................................... TTGTAAACAAGCTCCTGATGCATGATGCCAACGGG 455739 36 100.0 35 .................................... CGGAATATGAGTCGGCGAAGGAGCGCTACCCCTGG 455810 36 100.0 36 .................................... CCGTGAAGGACGATTCTTGGCGGCTTATTCTTAACC 455882 36 100.0 34 .................................... CGGGCATAGCGGGAAGCGACATAACTCGGCTGAT 455952 36 100.0 36 .................................... CCGAATATTGTCAGGAATGTTTCGGTTGCAGTCAGA 456024 36 100.0 36 .................................... AAGTCCGATATATCCGGATGCTTGTGATTAAGGCTT 456096 36 100.0 35 .................................... TTATATGAATGCCCAAAGAAAACTTGGTAGGGATA 456167 36 100.0 36 .................................... TCGTACCAGACCCCGGCTCGGACGACCGGAGGATCC 456239 36 100.0 35 .................................... TCGAGATCGTTGGACCCGGGCGTGCCATCCCGACG 456310 36 100.0 34 .................................... TTGGCGTACGGGGCGGTTACGTCCGTAACTGTCA 456380 36 100.0 36 .................................... TTGGCGTACGGGGCGGTTACGTCCGTAACTGTCATT 456452 36 100.0 37 .................................... TGGAAGAAGCTGACCCTTGCGCGAGCCAGACTTGCGA 456525 36 100.0 35 .................................... ATCGTGGGGCCGACCGGGGAGCTGGTGGCCGGGCC 456596 36 100.0 36 .................................... CCTCACGGATATCAAACAACAACCACAAAGAAAGGG 456668 36 100.0 34 .................................... TTGTCGGCAACACGCCTGATATGCTGCACAACTT 456738 36 100.0 35 .................................... CTCGATCCACTGATATCCCTTGGATAGATCAAGCG 456809 36 100.0 35 .................................... CGATCTTTACGAAGACGGCCTTGGGCCTGTACCAA 456880 36 100.0 35 .................................... AGACAGATTGAGCGCGAGAAGCAGGCAGTCACCAG 456951 36 100.0 35 .................................... TCGGCCATAGTGTCAATCCTAACACCCTTTGCGTT 457022 36 100.0 36 .................................... TTTAAGATCGAGGTACTGGGCGATCGTAAGGCAGTC 457094 36 100.0 35 .................................... TATCCCTTGCCTGCCATGCAATGGCAGTGCCTTCA 457165 36 100.0 35 .................................... TACACCGAAGCGTCGGTGGATACGGCATGCAGGGC 457236 36 100.0 34 .................................... TTCCTTTAGGTTATTAAATGTATCTATTTGGCTT 457306 36 100.0 35 .................................... TCGATCAGGCTCTCGTCCAAATCGACCCACTTGAT 457377 36 100.0 39 .................................... TGACGTATCCGGGTGTGTTGGTGGAGCCTGCGGCGACGA 457452 36 100.0 34 .................................... GCCTTGTTATGGATGGCAAACTATGCCGCGTGGC 457522 36 100.0 37 .................................... CCGCCTTATGTCATGAACGTACAGGCGTTTGAGCAGC 457595 36 100.0 35 .................................... AGGCTTACCGGGCAAAGCAGGCAGTCCCAGCGGAT 457666 36 100.0 35 .................................... GCGGCGGAAGGTTGCGGCAAGAAAAAAGCATTGGA 457737 36 100.0 36 .................................... GTATGGGATGCGGCGGAAGCGGCCGACAGGGCCGCA 457809 36 100.0 35 .................................... TTCACCCTGAAAAAGAAGGTTACCATACCGCCGCG 457880 36 100.0 34 .................................... CTGTTATAACTTTAATGTAGTACAACTCACTCAA 457950 36 100.0 35 .................................... CTTTTAACGATATTTCAGGCAATGAGGTTAGGTGC 458021 36 100.0 35 .................................... ATTGCTTTACTTTTAGCAGGATTAAAATTATTGAT 458092 36 100.0 37 .................................... TCACCGACAATCATAAGTTTCCCACGCAAATCGGAGA 458165 36 100.0 35 .................................... CCGAACTCCGGCGTAGAGCCGGATCTCGATCCCGA 458236 36 100.0 34 .................................... GTGGAACCGCTGATTTCATCATGCCCGAACTCGT 458306 36 100.0 35 .................................... GGGACCTAACCAAGCCGCGCCGAGAATCATGAAGT 458377 36 100.0 36 .................................... TATGGATTTTTGCCCAGGGCGCTTAGCACGCCTTAT 458449 36 100.0 34 .................................... ATCCAAAGGGCAACCAGGATTTGTAAGGCGGCGA 458519 36 100.0 35 .................................... CCGAAATAGATCGTGTTGATATTGGCGTAGATGAT 458590 36 100.0 34 .................................... TCCCATCGTGCAGTTCTTTCTGATATTGGCTCGA 458660 36 100.0 38 .................................... AAGAATTGAAAGCGGCATTTGAAAAGTCGCTTCGGCCG 458734 36 100.0 35 .................................... AGCATTAGACTGAACAGTCGTGAATTTGACAGGGA 458805 36 100.0 35 .................................... GTTGGCAGGCCATTGAATATCGGCACAAGCTCGGC 458876 36 100.0 35 .................................... GTTGGCAGGCCATTGAATATCGGCACAAGCTCGGC 458947 36 100.0 34 .................................... TCAGTGTAAACAGTGGAATCGTAACCGCGCCGGT 459017 36 100.0 37 .................................... ATTAATGAATTGCGAATGTCGATCCATGAGGTGAAAG 459090 36 100.0 34 .................................... ATTTCAAATCCCTTCAAAGCAAGACCTACCCGAA 459160 36 100.0 36 .................................... TGGTAGGTCGGTCAAGTCCTCGGTCAAGTCCTCGGT 459232 36 100.0 35 .................................... CCGGCATTCAAGCCTGAGGATATCGTCCATCTCAA 459303 36 100.0 35 .................................... CTGGATAAGCAGATCAATATGCTGATGGAAATGGA 459374 36 100.0 34 .................................... TGATCCCCACCGTAGGCTTGCCATAGGCGCTCTG 459444 36 100.0 35 .................................... CTGAAGCGAGTGATCATGCCTGTTTACAACAAGGG 459515 36 100.0 34 .................................... ATGGGGGACAAGAGCGATAATATCCCCGGCGCAG 459585 36 100.0 35 .................................... AAGCCTTATGACAAGATGGCCAAGGGTAAAAAGGT 459656 36 100.0 34 .................................... TACAAGCCGAAAAAGATTTATCGAAGGAATGGGA 459726 36 100.0 36 .................................... ATCGAGCAGGATCACATCGCATTTCTGAGCCTTCCG 459798 36 100.0 34 .................................... AAGTTGGGGGCCAGAGCGGCGCTGTGCTTGGCAG 459868 36 97.2 34 ..........................T......... CCCATGAGGGGAATGTAATCGAATTGAAGCGGAC 459938 36 100.0 36 .................................... CGTTGTCGTTGAAGCTTGATGATCAGCTCCAGGCGG 460010 36 100.0 34 .................................... GCCTGAAATAGTTTCTCCTGTTCCGCCGTCTTGA 460080 36 100.0 35 .................................... TTGTAGACCGTTACAGGAGCCATCAACAGCACAGG 460151 36 100.0 34 .................................... CGGAGCAAAACGTTGTTGCGCTTCAGCGGATCCT 460221 36 100.0 36 .................................... AGGTCGAAGACCGGGCAAAGAAGATTGTTTCGGAGC 460293 36 100.0 34 .................................... TTTTGATCAGACAGATGAAGCAGTATGGCAACGA 460363 36 100.0 36 .................................... TGTGACACTACCAGGATCAACAACTGTCATTGTTGT 460435 36 100.0 35 .................................... ACGGAGCCCCTCGACTACACCCGGGTGGATCCCGT 460506 36 100.0 34 .................................... TGCTAACCCGCCGGCAATGTGAACGGGACCCGAA 460576 36 100.0 35 .................................... GGACGTTGCACGATATTTTCCAGGGCGGTGAGATT 460647 36 100.0 35 .................................... TTGCACTTCTTTTCCGAAGGCCCAGCAGCCTTCGC 460718 36 100.0 35 .................................... TTGTGTGGTCGACGGATCGGCTCGGGTGCCGGCGA 460789 36 100.0 35 .................................... GGGCTTTGATAGCCACAGCGCAAACGCTCCGAGCT 460860 36 100.0 35 .................................... GGGCTTTGATAGCCACAGCGCAAACGCTCCGAGCT 460931 36 100.0 35 .................................... AGATGTCCAAAAGGAGGGCCGTCATTCAGCAACTC 461002 36 100.0 34 .................................... TCGTCGGAATACTCCAAGCCGAACAGATCCACCA 461072 36 100.0 34 .................................... AGTTGTTCGATCTCCCCCTCGAACGCCCGCTTAA 461142 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 84 36 100.0 35 CCGCACCGATCTCCGATGCCGAAAGGCGTTGAGCAC # Left flank : CGGGACCCAAAGCGGTGGCGGTTGGTATTCAAAACCCTCAAGGGCAGGGGAGAACATTTGCAATATTCCATCTTTAGAGTCAGGGCCAACAAAACCCAGATTGAAGAGCTGAGATGGAAGCTCGGCAAAATCATGACGGAAGAGGATGATCTCATGCTCGTTCGCCTGTGTTCCGGCTGTGCACAGAGAGTAATAGACAGTCGGGATAAGGAAAAATGGAAGAAATCACCACCTGCATTTGAGGTTTTCTGATTCAAGCACCACCGAAATGCGTTCGACATATGCCAAATACTGAACGATAAAATCGTGATGGTTTTGCGTTTGTTAGGAGTACCGACATTACGAGGTGCTTGAAAACGATTATTCATAATAAAAACAATATGTAGATTCTTATATATTTTTATCGAATGGAAATCTTGACGGCTAACTGTGCTATTTTATAAACATACTTGAAGCGGACCCGCGCAAAGTCTCTCATATCAATCTATTAGAGGAGCGGA # Right flank : CTCTTCATATTGAGCGAGGGTGATCAATATGCTGCGCACGGTTCCGCGAGGCCGTGACATCCTGATTGGAAACGAAGGCTGCGGTTGATCGCGGGCTTATCCCGCTGCCGGGCGCTCGTGTCGCCGCGACGGCAAAGGGCTCGATCGCTTTCGCCTCTTTAGTTCGGAACCATTTGCGGGCCGTCGTCGCTCCCGCATGGGATCCCGGGAGAAAGCTCTGTCCCAGTCGCCGCGTGTCAGCGGCGTTCTTAAACTGCACCAACCCCGTCGGGCTGAAAATGCGTGATCGATCTTCTTCCTTTCTTTTCCTCTCCCATCATCTTCTTCCCAAAACATCGACTTTTTCCGTACCATCACATGAGGCGGTACATTGCCGATAGCGCGAAACCGGAAAAAGAAATGTCGTCATTGCGGTACGGAATCAGGGCGGACACACAGGTCCGCCCCTACGGTGACCGTGATGTCATATGATCTGGCCGTCGTGGCAGGGGGTTGTCGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCACCGATCTCCGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 487868-488891 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015381.1 Desulfococcus multivorans strain DSM 2059 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================= ================== 487868 36 100.0 39 .................................... AAATGACTGCGGCAGAAACAAGGGCGGTTGTTAAATTTT 487943 36 100.0 36 .................................... GGTATTGGCCTCATTACCGGGTCTGATCAAACGTGG 488015 36 100.0 38 .................................... CTTTGCTTAAGCCCATATCGAAGACAAAAATCTTTTAC 488089 36 100.0 35 .................................... GTGGAAGGCTGGAAACGTCAACCGAAATAACCTCT 488160 36 100.0 37 .................................... AGAGTATTAGGATAGCCTCGACTTTCTGGAACCTATG 488233 36 100.0 37 .................................... TTTCATTAACAGTTTCCTTCCGTTTTCGGAAAATTCT 488306 36 100.0 39 .................................... TTTCGTCCCGTGCCTTCACAGCACGGGCAAATTTCATAG 488381 36 100.0 36 .................................... AGGATCAAGCCGAGAATACGCTCGGCCTCCATGAAA 488453 36 100.0 37 .................................... AAAAGTCTAATGCTCCCAAATTCAAAGAAATAAGATG 488526 36 100.0 77 .................................... TTGTTTTTTAGCCATTGTCACCATCATTCAGTTTGTGTTTGAGACTGCTTGCGGCCCTGAACGACACAGCTACTTTA 488639 36 100.0 36 .................................... TTGCTCCAACCAGATATGCGCGGATATCCGAGAGGC 488711 36 100.0 37 .................................... TGGATTCTGCCATGCAGGGACACTGGCAGCTCTTCCA 488784 36 100.0 36 .................................... CTGCTCGATGCTGTAATCGAACATGCTTCCGCCATA 488856 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================================= ================== 14 36 100.0 40 GTCTGAACCATTGCCCCGATTCGAGGGGATTGAGAC # Left flank : ACCCTTCGAAGTAGATCGATGTGGTGTCGAAAAAGACGACGTTCTGGCTTAAAAAACATGTCGAACGTCATGGCCCGACACAGGTGATGCGCACGACCCGTTCGTCCCCGGCAACCTGTTTGCGCCGTCGGGACATCGGCTTGTAGCCCGGCCCAAAAAGACCAACATCACGGCTCCCGGGGAGGCGGTTTTGATAGGGTGAACGCCGACAGCGCAGGGCAAGGGTTTTGAGACGCCTTCCCCGCACATGATTTTCGATTTTTGCCGGCCGGAGGATGTCGCTGCTAAAATATCAAACAGATGCAGTGGGTTAAGACGATTTTTGTCGTGTTGGCCGGTGCGGAGATGTGCGGAGAACAATATGGTTAATATTCAAAGAGGCTTACATGAAATTTGTGCCGTTTTGGAGGTGGGGAAAATCTTCCCAAACACGTTTTTTGGGGGGATGTGCGGAAACCCTGTTGCAACCCCAGGAAAAATTTGCTAAAAAAACACCCAGA # Right flank : CACTTCACCAGGCAGGACATCGGTTTGCAGTCCGGTCCAAATAGACCAACACCACGGCTCCCGGGGAGGCGGTTCTGAAAAGGCGATTCCTCAATATCGCCCGACAGCCGTTGACTCGAATTTCCGCGTGATCGGCGGCTCGCAATTGTGCGATATGCCGGGTCGCCGGCTCATTACGGACTGCATTGATCGCGCGTTTGCATCCACCCGGGGTACCGACCAGCGTTAGCCGCTATTACCTTCCAATTATCCGACCTTCAGCATTCCGACAGCTCTCTGTCTTCATCACCTTATTATGTCGGATCTGTCCGATAGGTATTTATACCTATGCGGCAATAGGCACTTGTACGCATTGACTTGATCGGAAAAAGTATTTTAAGATCGCGCGTGGATCCGGCCGGAGGCGGCCAAAAAGCAGATCATTGTTATCGAAGCGCCGGCCAACGACAGCCAACCATAACGAGCAGGAATTTTCGAAGGATGAAAAACGACCGGTGAAG # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCATTGCCCCGATTCGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 2920238-2924049 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015381.1 Desulfococcus multivorans strain DSM 2059 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================= ================== 2920238 36 100.0 38 .................................... AAGTGTCGTCAGTTAAAAAATCAACGGCCCTGTCTTTG 2920312 36 100.0 38 .................................... CAAAGCACACACCTGCCTATTTCCTGAAGCAGCATTTT 2920386 36 100.0 37 .................................... TACTTCAACCCCTCGTGGGGATCCGGCGATCCCCTGA 2920459 36 100.0 37 .................................... ATATTATTTCAGCCCCAGACCAAATCCATGCCATCGC 2920532 36 100.0 36 .................................... CGTTGAAATAAACTTCTCTCATGCTAATCCCCTTTC 2920604 36 100.0 35 .................................... TTATCATGGTAAAGGAATCCGTTTCGAACGTGAAA 2920675 36 100.0 38 .................................... TTGTTTGCCCGCTTTAAGTAGAGGCTTACGTTACCTGC 2920749 36 100.0 38 .................................... CATAAGCAACACCCACGGTGTGGGTGCTCTTCGTGCCG 2920823 36 100.0 37 .................................... TAGGCGATTAGCCCATCATCATACTTATATGATGATG 2920896 36 100.0 40 .................................... CCCAAGGGCGGTTATGTTTCCTGCGGAGGATGAGGATATG 2920972 36 100.0 37 .................................... AAACTTACGGGCTTGATCTGCCATGTTTTTCTCCTTT 2921045 36 100.0 38 .................................... TATCTGATAGGCGGTTAATCGCCCATCATCATATAAGT 2921119 36 100.0 37 .................................... TAACTGTGGCCTTTGCAACGATATTGTTTTCTTTTGC 2921192 36 100.0 36 .................................... GTGGGCCGTAGGCCCTGAACCCCGATTCCTTGATTG 2921264 36 100.0 38 .................................... TTTGACTGGGTCCATCATCTTGAAGCCTGCACATTGCA 2921338 36 100.0 38 .................................... ATGAGGTTGGTGGGCAGTTCCATCGGGACATCCCAATG 2921412 36 100.0 37 .................................... TAGGCGATTAGCCCATCATCATACTTATATGATGATG 2921485 36 100.0 40 .................................... CCCAAGGGCGGTTATGTTTCCTGCGGAGGATGAGGATATG 2921561 36 100.0 37 .................................... AAACTTACGGGCTTGATCTGCCATGTTTTTCTCCTTT 2921634 36 100.0 38 .................................... TATCTGATAGGCGGTTAATCGCCCATCATCATATAAGT 2921708 36 100.0 37 .................................... TAACTGTGGCCTTTGCAACGATATTGTTTTCTTTTGC 2921781 36 100.0 36 .................................... GTGGGCCGTAGGCCCTGAACCCCGATTCCTTGATTG 2921853 36 100.0 38 .................................... TTTGACTGGGTCCATCATCTTGAAGCCTGCACATTGCA 2921927 36 100.0 38 .................................... ATGAGGTTGGTGGGCAGTTCCATCGGGACATCCCAATG 2922001 36 100.0 35 .................................... TCCCGCGTACAACCCGGCCCCCATGCAGGCAGCTC 2922072 36 100.0 37 .................................... TCAACCTTGCAACCTAATTCTTTTTCCAAAATTTCAA 2922145 36 100.0 37 .................................... AGATGATCGGCATTAAAGCCCGACTGCGCCGCCGCGA 2922218 36 100.0 36 .................................... TATCGGGTTTAGTGGAAAACAGACCAATGGACTTGA 2922290 36 100.0 37 .................................... ATTGGTTGCCCACTCTACGCCTTCTTCACACGCATCG 2922363 36 100.0 37 .................................... GGAATTATTAGGAATTAAAGCAATGGTTATGTTTTAT 2922436 36 100.0 37 .................................... TTCCTCCTTTCAGCAACCGCAGTACCCATCTGAATCG 2922509 36 100.0 35 .................................... AAAACGGGCCACCCGAAGGCAGCCCGTTGAATTTT 2922580 36 100.0 39 .................................... TCAAAGCTGCCATCTTAATTATGTCTTTTTCCTGCATTC 2922655 36 100.0 37 .................................... CACCGCGTTAACTCTTCAAACCGTTCACCATCAAAGG 2922728 36 100.0 39 .................................... TAATTCGTTCAATTAATTTTAATCTTCCACATCTGAATT 2922803 36 100.0 39 .................................... TCTGTGCTAATGCCCAGATGCCCGAACCAATCTTTTTTA 2922878 36 100.0 36 .................................... TTCGGTGAATACAGTAGCATCATAGGTTACTCCTTG 2922950 36 100.0 38 .................................... AGAGGTACGCCTCATCATCACCCTCTTCATCATAGTAG 2923024 36 100.0 39 .................................... TACGAGTGTATGTCCGAGGTGCGCACATTCGATGACACA 2923099 36 100.0 36 .................................... TGTGACCACGAGTAGTTCTTGTGTAGGCCACACTGT 2923171 36 100.0 77 .................................... TTGTCAGTCCCTTTTTCATGGCTTTCGCTAAAGGTGCTGCTGGTATGGCCCAGTCCATGTTGATTGGACCAAGATCA 2923284 36 100.0 37 .................................... AAGATGTCCGTTGAATCACATGGAATCCCATAAATCT 2923357 36 100.0 37 .................................... TTTATTGTTTTTATCAATATGTTTCTCAACATATTGA 2923430 36 100.0 37 .................................... AACAGACAATGCAAAACCAATAAAACATAACCATTGC 2923503 36 100.0 39 .................................... ATCGCGTCCAAGGCGCAGGCGTCCGCGACTTGACCGTAG 2923578 36 100.0 36 .................................... ACATCTCCATTGCCATCAAGACAGCTTCCTTGATTG 2923650 36 100.0 36 .................................... TCTATAACCCGTTGAAAGCACTGTGTATCTGGCTCG 2923722 36 100.0 37 .................................... ATGTGATTCCACGCCATCCTGGCGAGGGCTCGCACGA 2923795 36 100.0 36 .................................... TCTATAACCCGTTGAAAGCACTGTGTATCTGGCTCG 2923867 36 100.0 37 .................................... ATGTGATTCCACGCCATCCTGGCGAGGGCTCGCACGA 2923940 36 100.0 38 .................................... ATGCCTGTGCACTCTATATCGGAGAGTACTCGCATTGT 2924014 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================================= ================== 52 36 100.0 38 GTCTGAACCACTGCCCCGATTCGAGGGGATTGAGAC # Left flank : AAATAAGGACAATACCAACACGGTGAGCTGTGGGGAACTCTCATGGCTTTTAATGCAATGGGAGGCGGCTGAAAGCAGGATCAGTTCTGATTGGCAAACCGCCGTATCGGCATCGTGTTCACACTGCCCTCAACAGGCTTGTGGAAAAAGTGAAGTTTATGTCATTCCATCTGCTTATGGCGCGAAGGTTGCGGCGACCTGAAGGATCGATCAAGCAGGAGAGAGAGGCAATCCGTCTTTCCCGCACATGATTTTCGATTTTTGTCGGTCGAAGGATGTGGTCGATAAAATACCAAACAGATGCAGTAGGTTAAGACGATTTTTGTCGTGTTGGCCGGTGCGGAGATGTGCGGGGAACAATATGTTTAATATTCAAAGATGGTTACATGAAATTTGTGCCGTTTTGGAGGTGGGGAAAATTTTCCCAAACACGTTTTTTGGGGGGATGTGCGGAAACCCTGTTGCAACCCCAGGAAAAATTTGCTAAAAAAACACCCAGA # Right flank : CTCGCCTTTTCTTTTCTAAAAAATTTCTCCCGCTTTTGAAAAATCCCTCCTCAATGCCGTTTAGCGCGATAAATTGAAGATGATTCCTGCCTCGGTTGCCGCCACCGGCGCGGCCGTTATCCCTGTTGTCGGCGCTGCCGCCGGGCGCCAAGATTGCCGGCGGCAGCGCCCGCTATCAACTGCTGAGAACAGAGGACGGAATGCCGCCCGTAGACGGCGGTTCATAACAGCAAACCAACACGATCAGTACGATTGATCTCGATCGGATGTTGCCGCCCCAACATCCCAAAGAAAGGAAGGCTCAATGACGCTCCTGAAACGCATGTGGAAATGGCTTACGGCTTCATCCTCACGGGCCGCGAGAAAGGGGCACCCGGACCTGTATCCCCTGAATGTGGCGGCACTGGCTCAAGAACTCAACCTTGTCGATGAGGGTCGGCGCCTGGGAGAGGCGGGGATTCCCGAATCCGATGCGAAAACCTTGACCGGACCGGAGGCCG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCACTGCCCCGATTCGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2929482-2930758 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015381.1 Desulfococcus multivorans strain DSM 2059 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2929482 36 100.0 38 .................................... TTGAAGTAGAAGTCATGGCAATTTTCGCAGATGATGCA 2929556 36 100.0 37 .................................... AACAGCCTCATTAACAACCGCAACTGCCTCAGCATTT 2929629 36 100.0 37 .................................... ACCCCGCAGTGGGCGCAGGTTCTCACCTGCTCATCAC 2929702 36 100.0 37 .................................... CGCTTTCACCCTCAACCTTTTTAAGAATAGACTTAGC 2929775 36 100.0 38 .................................... GATGAGAGCGTTTCTTTTCAATTCATACTCACGATTCG 2929849 36 100.0 36 .................................... GTATTCAACGATGCAGCTTAGCATGTCAGCGACTTT 2929921 36 100.0 37 .................................... TTGAACATACTTCGCAGCAGTATAAGGGCACCATGTT 2929994 36 100.0 38 .................................... TGCATTTTCATTGTGCTTAGTCTCCTTATTTTGTTTTG 2930068 36 100.0 37 .................................... CCGGGCAATTTTCCGGGAAAACGATTTCCGCGGAACC 2930141 36 100.0 35 .................................... GAGACCGTTGATTGTTTCCACCTTACCATTAACGT 2930212 36 100.0 35 .................................... CCCTCGATCTTTAGAAATTGTTCCGCAGAGATATA 2930283 36 100.0 38 .................................... GAGGATCGTGAATTCTCCTGAGTTTTCTTCAACGTTCG 2930357 36 100.0 37 .................................... ATCACGTTTTCGCCTCCTTTTTTTATTACTGAGTAAG 2930430 36 100.0 38 .................................... TTAGATTTGGGAATTGACGCTTTATAGACTTTCATCTT 2930504 36 100.0 37 .................................... CCCCAACGCGGCAAGGGCTATCTTTCGGCTCAATTTG 2930577 36 100.0 37 .................................... CCCCAACGCGGCAAGGGCTATCTTTCGGCTCAATTTG 2930650 36 100.0 37 .................................... TTCATAAATATCTCCTTTTCCACCATGTTCCGCCTGA 2930723 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 18 36 100.0 37 GTCTGAACCACTGCCCCGATTCGAGGGGATTGAGAC # Left flank : CATTGAAGGGATTTTATCCGATCCCCCCCTGTCCAACGCCGATTTTATCCGTCGCGTTCAGGGCATTTTCGATCAAAGCCGCGAACTTCAGTGCCGTCACTTTGTCCGGCTCAAAAGCACCATTGACGACGCCGTTCAATCCGATCGGGCGCGGCTGATGGTTGAAAGCTTCTTCTACAAAAGCGAGGTCCGGCGATAATGCAGGATAGGATTAGAGAGAACGGCCCGAACAGGTTTTTCCCCGCACATAATTTACGATTTTTCCCGAAACACCAGCCAACTGATTACAATAACTTTAAAACACAATGGGTTGGGTTGTTTTTTCTCATGCGCGGCGGGAGGGAGATGTGCGGGGAACAATATGGTTAATATTCAAAGAGAGTTACATGAAATTTGTGCCGTTTTGGAGGTGGGGAAAATTTTCCCAAACACGTTTTTTGGGGGGATGTGCGGAAACCCTGTTGCAACCCCAAGAAAAATTTGCTAAAAAAACAGCCAGA # Right flank : CTTGTCGCCTTCTTTCCTGTATAGACATCCGGCGACGCCGTCTGAACCATTGCCCAAGCGCACAACTGCGTATTTTGTTCACCCTGCCCCACCCCTCTCAAAATTTTTCCCGGACTATTCTGAAAAATCCACCAGTCACACCGTTACTGATCCTGTGCACGTCTTTCGACGCTTACGATAGAAAGACTGACTGCACGGACATCCATTTTCCGATGTTCAAGCAGGTGAAAGCAGGTAGGGAGAGGAGGCCGGGAATTGACGATGTTGTATTTCAGGGAGCTGGTTCGGCTGTGCCGCCCGAATTTGAGAACGGCTATCTTTCTTGGAAAGTTGTATTCCAGGAATGAACAGAAACTCTGGATGCTGTTGAAACGTTGGGATTGAACCGCCTGGAAAAGGCGCTGTTCCGATGCCGCGGCGCTGAACGCAAAGACGCTTCGAAACCGGCGGGTTTCGAAGCGTCCTCCACAACACATTTCAACATTTTTTTTGGATTTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCACTGCCCCGATTCGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA //