Array 1 191802-196393 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMDE01000058.1 Acinetobacter baumannii OIFC074 ctg7180000004703, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 191802 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 191862 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 191922 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 191982 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 192042 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 192102 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 192162 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 192222 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 192282 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 192342 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 192402 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 192462 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 192522 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 192582 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 192642 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 192702 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 192762 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 192822 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 192882 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 192942 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 193002 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 193062 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 193122 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 193182 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 193242 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 193302 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 193362 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 193422 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 193482 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 193542 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 193602 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 193662 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 193722 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 193782 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 193842 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 193902 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 193962 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 194022 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 194082 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 194142 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 194202 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 194262 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 194322 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 194382 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 194442 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 194502 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 194562 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 194622 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 194682 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 194742 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 194802 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 194862 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 194922 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 194982 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 195042 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 195102 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 195162 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 195222 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 195282 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 195343 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 195403 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 195463 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 195523 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 195583 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 195643 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 195703 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 195763 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 195823 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 195884 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 195944 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 196004 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 196064 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 196124 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 196184 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 196244 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 196304 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 196364 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //