Array 1 30896-30378 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDH01000186.1 Streptomyces sp. IGB124 P428contig36.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 30895 29 100.0 32 ............................. GAGGAGGCGTAGCCCTCGACCTCGTACCACTC 30834 29 100.0 33 ............................. GGGGTGACGTATCGGCGGACCCGGATCATGCGG 30772 29 100.0 32 ............................. CCTCACCGGCGACATCGGAGAGCTGCGCGACG 30711 29 100.0 32 ............................. GACTTCCCCGCCGCGGCGCCGGCCGGAAAGCG 30650 29 100.0 32 ............................. ACTGCCTTGCCGTCGCCCTGCTGGGCCTGCCC 30589 29 100.0 32 ............................. ACCTCGAGGCTCTGGACATCTGGGACCACGTG 30528 29 96.6 32 ...........................T. GACCGGCACACCGAGCTCTACAGGGAGCGTGT 30467 29 100.0 32 ............................. TCCCTTGGTGACCCCGTCCGGGGGCCGGGGTG 30406 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 9 29 99.6 32 CTGCTCCCCGCACCCGCGGGGATGTTCCC # Left flank : CCGGGTCACCCTTCAGTCGGACCGTGACGTCTCCGTGCCGGCAGGCCACAACTACGCAGACGAGGTGACCTGGTGACCGTGATCGTCCTGACCCAGTGTCCCGTCGGACTGCGAGGGTTCCTCACCCGTTGGCTATTGGAAATCTCACCCGGCGTCTTCATCGGCGGGCCCTCGGCACGAATCCGCGAAGCGCTCTGGGCAGAGGTGCGCCAGTACGCGGGAAACGGCCGGGCGCTGCTGGCCTACAACACAGACAACGAACAGGGCTTCACCTTCGACACATACGACCACAAGTGGGATCCCACCGATCGCGAAGGCGTCATACTCATCCACCGCCCCAACGACCGGGCATCCGCTACCTCCGCCACCAACCGAGGCTGGAGCAAGGCTGCGAAGCGACGACGATTCGGGAACGCATGAGCCAGAAATCCTAAATGCCTGATTCAAAGGAAGTCGGTCAAATCTTCCGCTCCCACAGATAGAACCCCAGGTCGGTCACT # Right flank : TTCCAATTGCCGCCGCCGGGGTGTCCGGTGACCTGCTTCCCGCACCCGCGGGCTCTGGCAAGAGTTTCGTAGCCGGAGATCATTTCGGTGACACGGTCGGGGCGGTCTCCAGCGGGCACTGTCAGCCGAAGGTGCCATCGTCACGGACGGAGAAGTGTTCGCAACCATCGTGCTCAAAACGCACGCGCCCATCGAACCGGGAGTCGGTGTGGGTGCAGGCCCCCCAGTCCAGGCCCAGGTCTCCGCTCAGCGGGATCCAGAACCGGCATCCGCCGCACTGCTCGTCGAACCATTCGTCCCGGTAGTCGGGGTTTCCCGTGGAGCGATTGAGAAGCCGCAGCCAGCGCCCGTGGACGGCGTTGCCATCTCCCCTCCGTTGCCGTCCGTCTGCGGCCTACCCGATGCCACCCGTTCCCCAACCTCTCGTCGAATTCGCAAGGTCAATCTGCACGGAACCGGCGGTCAGCCGCCAGCTGATTTGTGCGAGCTTCAGCTCATCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 40390-41396 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDH01000186.1 Streptomyces sp. IGB124 P428contig36.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 40390 29 96.6 32 ........................C.... CCGAGCTTCCGAGCACCCCGGCCCACTAGAAA 40451 29 96.6 32 ........................C.... ACCACCCACAGGGCGTCCAGGGCGGCCACGGT 40512 29 96.6 32 ........................C.... AGCACCGCGGCGAGGGCTATGACGGTGAGGCC 40573 29 96.6 35 ........................C.... CCCCCGCTCGATCTTGGCGTAGGTCGTGAGGCTGT 40637 29 100.0 32 ............................. CAGTCATGGCTGTCGACCTGCGCCGCGGACTA 40698 29 100.0 32 ............................. AGCCCCGCCCCGTCCGTGGCCCGCTGTACGTC 40759 29 100.0 31 ............................. GACACGTCCTCGTTGTCGACCAGCCGGGCGC 40819 29 100.0 32 ............................. TCGGCCTGCGTGACCGGCCGCGTCCACGACGG 40880 29 100.0 32 ............................. GCATCGAACCTGTACTCCACACCCACGTTGGT 40941 29 100.0 32 ............................. CGCGATCAGCACATCGAGGACAGTGTTCTCAG 41002 29 100.0 32 ............................. TGCTGCGGGTGGCGTCCGATGTGCAGCAGAGG 41063 29 100.0 32 ............................. CCTGCCCACCACAGCGCCGCCGGTGGTTGCGC 41124 29 100.0 32 ............................. TACATCGGGAAGTCCGTGGTCTGGCTCCTGCA 41185 29 96.6 32 .....T....................... CACACGGATCCGTGGAGCAACTCCCAGGTGGA 41246 29 100.0 32 ............................. ACCACCCACAGGGCGTCCAGGGCGGCCACGGT 41307 29 100.0 32 ............................. GCCGTATCGACGACCGGCTCCGCGCCCTCGCC 41368 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =================================== ================== 17 29 99.0 32 CTGCTCCCCGCGCCCGCGGGGATGACCCC # Left flank : CCGGCCAGCACATCGACCTGGCAGGCAAAAGCCGGCGTGGCCTTACCAATGTCGTGCACGGCAGCGAGCCAGACAGCCAGCGCCCTGGCGTCCTCGTTGCCGCCCCGTAGCTCACCAGTCACAAGTCCGCTCACTTGACGGGGAATCCACTCATCCCACAACCGACCCGCGACGGCTGCAGCATCGGCCATATGGCGCCACAGCGGAAGCCACTTGTCCGTCTTCCGATCATGCTTGGCCCACACACTGCGCGCCTCAGCTGTGAGCATCACACTCCAGCGCTCCGGCATGCTGCTCTGCATCGTTCCCTCCCCGGAAGCCGGCGTACGTCGCGCTCGCATGCGACACCCATGCGCCAGAGGTTGCTGCTTATAGTCGAATTGCCCGAGATGCTAGTCGGATTTGTCCTGACGCAGGAAGACCTTCCATCCGATTTGTCGGATCTCTAAGAAGTGCTGCAGCGCCGCCCCCGGCCGCCTTAAACTGCCAGGTCAAACAGT # Right flank : CATCGTCGCCCGCATCAGTTCGGTTCGTCCTCTCCGAGATGTCAGGCTTCGGCGGCGAACGCCCGTGGAGCCAGGTTTCCACCGCTCTGGAGGCACTCCTCGATCATCAGGATGCCGGCGGCGACGACCTTTCCCCTGCCGAGTGCGCGTCGATTCTGGTCCGGCTGGAAGCGATCACCGACCAGTGGGCACAGGAGGGCGGCGACCAGCTCTTCCAGCACATCGAGGACGTCCCGCTGGGCTTCCTCTGAAGCGCGCCCCCGGAACCCGCTTACGGGACAACCCTTAGCGGTAGCTTCTCAGAGGGCGTCCACGTCCCCGGCACGTGGGGAGCCCGGACCTGCCGCTGCACGCCTGCGCGGGGGGCTGCACCTACGACCAGGCAACCACGCTCGTGTGCACGCAGGGTTCGCGGTCGACGCCGTGACCGGGACAGCTGTTGTGGTCACTAAGGGACGGCGACGAGGGGCACACTCCTCCGACCGTGACGGCAATCTGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGACCCC # Alternate repeat : CTGCTCCCCGCGCCCGCGGGGATGCCCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 17592-17821 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGDH01000203.1 Streptomyces sp. IGB124 P428contig50.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 17592 29 100.0 32 ............................. GTGGCCTCGGCGTCCGTCGGACCGGTATCGGT 17653 29 100.0 32 ............................. TTAGCGCCCCATTCGAAGCGAACGCAAACTAT 17714 29 96.6 50 ............................T GGGGGCAACCGGGGCAACCGGGGCAACCGGGGCAACCGGGCCCACTGGGG 17793 29 93.1 0 ...........................CG | ========== ====== ====== ====== ============================= ================================================== ================== 4 29 97.4 38 CTGCTCCCCGCACCCGCGGGGATGTTCTC # Left flank : CCAGGTCCTTCTCCGCTCCGACCGTGACGTCACCGTTCCGGCGGGCCGCAACTACGCGGAGGAGGTGACCGGGTGACCGTGATCGTCCTGACCCAGTGCCCCGTGGGGCTTCGAGGATTCCTCACTCGCTGGCTGCTTGAAATCGCTCCGGGCGTCTTCATCGGCGGGCCTTCAGCGCGAATCCGCGAAGTGCTGTGGGCGGAGGTGCGCCAGTGCGCAGGGAACGGCCGGGCGCTGCTGGCCTACAACACAGACAACGAACAGGGCTTCATCTTCGACACACACGACCATAAGTGGGACCCCATCAATCGTGAAGGCGTCACGCTGATCCACCGCCCCAACGACCCCACATCAACTACCTCGACCATCAACCGATTCTGGAGCAAGGCCGCCAAGTGACGACGCTTCGGAAACGGATGAGGCAGAAATCCCAAATGACCGATTCAAAGGAAGACAGTCAAATCTTCCGCTCCCACACATAGAATCCCAGGTCAGTCACT # Right flank : GCGCCCGCGTCCGGCTGATGACCGAGGCCGGCCTGCTGAACCGGTTCGCAGAAGTCAGGTGGCCGGAGCCCATCAAGCGCGGCGCCTGGTGGGCCTGGGCGCTCCGCACTCGCCGGGCCAACGGCTGCGCACCGCCTGGCTCTCGCTGACACATCGGGCTCCGCCAAGAAGCGCAGAGACACATCGTGCTCACCGAGCGGGAGATAGGCACCGCCGAAGCCAGGGCCGGCCGGGCGGCGGAGCCTTTGGCGGACCTCGGTGTAGACGGAGTACACGAGGGCGCCCGGCCCGGGCACCCGCTCGCCGTCCGCCGGCGCCCGGGCCGTGTACTGGCCGGACTTGGTCCTGCTCCGGCCCGGCGAGGGCATCGTGGCCATTGAGGTGGAGTTCACGGCGAAGACTCCGAGCGCGCTGCGGCAGATCCTGCGGGGCGTATGGGGGGCGTCGGGTGGTGTACCTGGCAACCGATCCGGTTGTCCGTCAGTTGCAGGGCCTGCCTG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.09, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGTTCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //