Array 1 117-858 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000012.1 Conchiformibius steedae strain COT-280 scaffold_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 117 36 100.0 33 .................................... ATTCGTCAGCCCAGAGCCCCACAAGGCGAAACC 186 36 100.0 34 .................................... TTGACACGCGGCTTTCCTTAAACAACGTTATATA 256 36 100.0 34 .................................... GGCTGGCTTTGACCTTGCGGTTCATGATTGCCAG 326 36 100.0 36 .................................... GCTCAGCTTCAAAGCGAGCAATCGCTGCCTGCGTAT 398 36 100.0 34 .................................... AGGACTTTAGTCCCTTCCGAGCGAGCCACGGTAT 468 36 100.0 33 .................................... CTTGGACTTGTCCAGGACGAACTGCTTAGACTC 537 36 100.0 35 .................................... TAATAATCCCATGCTTCCTGCAAGGCGGCTTGCAG 608 36 100.0 37 .................................... TGGTCAGCAGCTACTGACGACAGCTTTTTCAGAAACT 681 36 100.0 36 .................................... TTGAATGCCACATCTTTGATTGAAGGCGTCAGGACA 753 36 100.0 35 .................................... TCCTGAATCTGGCTGATACGGCTCAAGTGGTAAAT 824 35 80.6 0 .......................-T...T...TCTG | ========== ====== ====== ====== ==================================== ===================================== ================== 11 36 98.2 35 GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Left flank : TCCGACTGAAAAACGCTCTTTAAACTGTTAAATATTGTTTTTGATTGTTAAGATTTGTAGCTTATAAATTGGTACTTTTAAGAACTTAATTTTAAACAAGAAAAAGGGCTTCCGCAG # Right flank : GTTTCCTATTCTTCAATCCCCCATATACACCATGCCCTGCGCTTTGTTTCGCAGGGCATGGTTTTTTTGATTGTCTTTCCCTTCTCGCTTTATCTGAATATTTACAGGCAAAACGGGAATCGCTTTTTGCCGTTTTCGCGTAAAATACGCCGTTTTTCTTTTTCTCACACGCGCAACAGCATGAACGCCTATTCTGAAGCCAGTATTCAAGTATTAAAGGGGCTGGAACCCGTTAAACAACGCCCCGGTATGTACACCCGTACCGATAGTCCCACCCATATCTGCCAAGAAGTGATTGACAACGCTGCCGATGAAGCATTGGGTGGTTTTGCCAGCGAAATTGATGTACACATTCATGCAGACGGTTCGCTGTCGGTGCGCGACAATGGGCGCGGTATTCCCACAGGTTTGCATCCTGAAGAAAATATTCCTGTGGTGGAACTGGTGTTTACGCGCCTGCATGCTGGGGGGAAATTTGACAAGCAGTCGGGTGGCGGTGC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 3538-4338 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000011.1 Conchiformibius steedae strain COT-280 scaffold_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 3538 36 100.0 34 .................................... CCAAGTTGTAGAAGGGAAATTAAACACTGTGTGT 3608 36 100.0 34 .................................... GATTGTACCAGCACGAATGGGGTAATGCGTTTGA 3678 36 100.0 35 .................................... TATTCCGCCATTGGAATGCTGGCAACAAGCTTATT 3749 36 100.0 35 .................................... TATTGCTCGCGTAAGTGTGCGCACCGAGATCGTTG 3820 36 100.0 33 .................................... GGTTTGGGAATACGAACGCGCCCAAGAAATCGG 3889 36 100.0 33 .................................... AGAATCTGAGAGGAAAGCTGGCAAAGTTGCAAA 3958 36 100.0 32 .................................... GTTACCTGAGGGATATTCTCATCGAGACAAGT 4026 36 100.0 33 .................................... ACATGGATTCTGTTTCATACAATCCTGGTTCAA 4095 36 100.0 33 .................................... AATACGTACAGTGCCTTATTCAGAAGGGCACTG 4164 36 100.0 33 .................................... TTATGCAAAAGCCGAAAGGCAAACGGGGTAAAT 4233 36 100.0 34 .................................... GCGTATAACGTTGGACGCTCAGGAGCTGAGTTGT 4303 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 12 36 100.0 34 GTCTTAATCCCCTAATAATGGGGAAGGTGTTCCGAC # Left flank : GGACCGAATCCGCTAATCGGGCGTTTGTCGGGCAAAACCGTTTCTTTTCCCAACAGCCTGCTGCTGAGTTTTCCACTGTACCGCGACAATATTTTGGGCAGCTATGTGGTGCATATGTTTGATATTCCCGTGCCGATTCATTTGGATTCGGACGCGATTACCCCGCGTTTGGAAGCGGTGCTGCTGGAAAAATGTTCGCCCTATATTGATGAAATTTCGGCGCATTTGGAAGCGGTGCAGGTGCAGAAACTGTTTATTACCCCACCCGCGCAACCGAGCATCAGCCGCGTGCCTTATGATGACAAAGTATATAATTTGGCGGTGCGCTTTGCTGCGCCCGTGGGCTTGCGGGTGGATATTCAACAAGCGGTATTGGATGAGTTTATTCGGGTGCAATACCGTTTGCTTAACCCATAATCCCCATAGAAAAAACATGCCCTGTGATATAAAGCACAGGGCATGTTTTTTAGTAATGTAGCGGCACACGGCACAGGCTACGG # Right flank : CTGCGGAAGCCCTTTTTCCTGTTTAAAATCAAGTCTCTAAAAGTACCAATTTATAAGCTACAAATCTTAACAATCAAAAACAATATTTAACAGTTTAAAGAGCGTTTTTTAGTCGGAAAACACGTTTGCCCGTGTCGTCGGAACATCCTTTCTATTCTGCACATTATCGCGGCGTTTGTCAAATGGTTTTTGCGTGGAAAAATATTGCAATGATTTAGGGCGTATCCCCATTGGCTTATGCGGCGGTATTTTTGAGCAATCATCCGCTTGGCAAAGCCAATGGGAACACGCCTAGGGCAGAATATTATCAGGCAGATTAGCGGAATGTGCGCCCAACCATGCGTTTACCCGCGTTTGCAGGCCTGTGGCGCATAAATCCATATCTGCCAGTAATTTATCGGCATCGCCATGTTCGGTTACGATGTCGGGAATCCCCAGCAGCAACACGGGTTTAACCACGCCTGCTTGTGCCAGCGCTTCCAAAACCGCGCTGCCCGCGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCCCTAATAATGGGGAAGGTGTTCCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 15388-15773 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000011.1 Conchiformibius steedae strain COT-280 scaffold_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 15388 36 100.0 35 .................................... GCTCCTTACCTTAAATGCTTACCGCAATTTCAACC 15459 36 100.0 35 .................................... TTAGTCAGTGATAACCAATGATTCAAATATATACT 15530 36 100.0 33 .................................... TCGATGAATTCGTATTCGTCGGAGAACAATACG 15599 36 100.0 34 .................................... GACGACAGCTTTTTCAGAAACTCGCGGCGAGTCA 15669 36 97.2 33 ....A............................... GCTGCGCTTCCAGCAGTTGGACGATTCGCTCTT 15738 36 77.8 0 ..........................CTG.CC.ATG | ========== ====== ====== ====== ==================================== =================================== ================== 6 36 95.8 34 GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Left flank : TTATGTTTCGCTAAAAGGCGTAACGGGTTCTGCCCAATTGAATACCGCCCAAGTTGCCGAAAAAATGACCCTGCTGCGCCGCCATTTCAGCCTGCCCATTGGCGTAGGTTTCGGCATTGCCAACGCCCAAGATGCCCGCGCCGTGGCATCGGTGGCAGATGCCGTGATTATCGGCAGCCGCATTGTTGCCGAAATTGAAGCCAACCCCCAACGCGAAACCCAAGCCGTAGGCGCACTGGTGCGCGAACTCAAAGCCGCGCTTCAGCCCTAAAATCTCGACCGTTTGGCATGGTCCGACAGATTGGGCAATGCCAAACGCTTGACAAACGCCGCGATAATGTGCAGAATAGAAAGAATGTTCCGACGACACGAGCAAACGTGTTTTCCGACTAAAAAACGCTCTTTAAACTGTTAAATATTGTTTTTGATTGTTAAGATTTGTAGCTTATAAATTGGTACTTTCAGGGATTTGATTTTAAACAGGAAAAAAGGCTTCCGCA # Right flank : GTGTTCCACCCTATTCCCCCCCACGCCCTGCGTTTTTTTGCCGCAGGGCGTATTTTTCGCCTTGTCTTTACCCAAAAATATCGGGACGGATAGTTTGTTATCCGTCCCGATATTGGGTTGCAAAATTTTACTCTTCGCGCCCGTAAATATGGCGTGTGCCGTTGGGTTCGGGTGGCGACACAATGCCCGCTTCTTCCAAATCCTGCATCAGATTGGCGGCACGGTTGTAGCCGATACGCAAATGCCGTTGCAGCGACGAAATGGAAGCCTTACGGCTGCTCACCACAAAATCCACCGCCTGTTCAAACAATTCATCTTGCACGCCAGCCGTACCGCGTGGAGCTACGCCCATGTCCCCACTTGCAGCACCGTCTAAAATGCCTTCCACATAATCAGGCTCGCCCTGCGTTTTCACAAAGGCAACCACGCGATGCACTTCGGCATCATCGACATACGCGCCTTGCATACGCAAAGGCTCGGCATCACCGGGGCGCAGGAAC # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 1584-2674 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000013.1 Conchiformibius steedae strain COT-280 scaffold_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1584 36 100.0 35 .................................... TTTCACACACTGTTCTAACTTCAGCAACTTGTAAA 1655 36 100.0 35 .................................... TTGCCTTGTGCGAAGGATTCAGGCAGGATTCAATT 1726 36 100.0 35 .................................... CGCCATGGTCGGCCTGTAAACGGGCCATGTCAAAT 1797 36 100.0 35 .................................... ATAGCAGGACATCTTGTATCCGCTCGGATGGTTTT 1868 36 100.0 33 .................................... AGGTGGAAAGGACGAAGTCCGTCCCCCTTCCCC 1937 36 100.0 32 .................................... ATTATACTGAGGTACCTCCTCTGCAATGGTAT 2005 36 100.0 34 .................................... TTGAGAACCGCATATACTTTACAAAGTCTTCACT 2075 36 100.0 34 .................................... AACCGTAAGGCGGTTACGGCAGCGGAGCGTATGC 2145 36 100.0 35 .................................... CGACTGATAGCTGCCTGAGTATCACCGATACTCAG 2216 36 100.0 33 .................................... AGCTATTGTTTGTTTTGTTACAGCTCGTACCAG 2285 36 100.0 35 .................................... ATTTCAGCTGGTTCACCTTTGATGTACAACAGATA 2356 36 100.0 34 .................................... ATGATTTCTTCAACAAGGTATAAAATCCCACTAT 2426 36 100.0 36 .................................... GCAACTACCATTTCGGTGATGACGATTTCTTTACCT 2498 36 97.2 33 ..........T......................... TGCAAACGAGCAGCTTTTTCGAGATAGCGGTTA 2567 36 100.0 36 .................................... TAAACAAACTTTACCGCGTGTCCACTGCACAGGGCA 2639 36 86.1 0 ............................T...TCCA | ========== ====== ====== ====== ==================================== ==================================== ================== 16 36 99.0 34 GTCGGAAAACCTTCCCCATTATTAGGGGATTAAGAC # Left flank : AACACACTTTCCTTGCCAATCAGCTTTAAGCCCTGCGAAATTTCAGGACCACCGCCATGCACCAGCACCACACGAATGCCAATTTGGTTCAACAGCAGCAAATCCTGCATCACTGCCTGTTTTAATTCCTCGTTAATCATGGCATTACCGCCATATTTCACCACAATGGTACGGTTTTGGTATTTTTTGATATAAGGCGCCGCTTCGCCCATGGCACGGGCAAGCGCATGAATTTGGGATTGATGCATAACAAAACTTTCTTACAAAAATGGCAGACAAAAACCAAGCAGAGTGTACCACGACCACGGCGGCAAAAAAACTTTGCACAGTTTAACCATTATGCTATACTGATGGCTTGTTTTTCAACTGTGCAAACGTGCTTCCGACCACGTTTTTTAGGTCTTTAAACCGTTAAAAATTGTTTTTGATTGTTAAGATTTGTAGCTTATAAATCGGTACTTTTAATAAATTGATTTAAAATGGAAAAACAAGGCTGTGCA # Right flank : AAATCAAACAGCGTTTGCCCTTTTATCAGGCAAACGCTGTTTGCTTTTTCTTTACGGCGGCAGTCAGTCTGCCAAACCTTCAATTTCAATCTGTTCGGGCAGCAGCTTTAAGCGGTAAAACTTGCGCGTGTTGCCGCCGCCGCTGTCAATATCAAACCAACTGCCCTGTGCGCCCAAATATTTGTGAAAAATCTTTTTAATGCGCGAACGGTGTTCCTGCAAAATCCGCACCATTTCGGGCTTGGGGTCTTCGTTTTGCAAACGCGCCCATTCGCTTTCGCGCTTGAGCTGCGCTTGTTTGCCCTTGCCCTGCAAGCCTTCCCCATAGCGGCAGTAATGCTTCCAGTAGCGCTCTGTCAGCATTTGGCGGTGCTGGGCATCGGCAATGCAAATATCGGTTTTGGCTTGACAAAACTCTGCCATGCTTAAATACAGGGCAAATTGCATGGGATTTAAATCGTTGATTTGCACATGGCTTTGCCCAAATACAATGTTTAGGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAAACCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 6997-7868 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000013.1 Conchiformibius steedae strain COT-280 scaffold_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 6997 36 100.0 34 .................................... ATTTTAAATTGGATAACAAACGTGTTTTCAGTTT 7067 36 100.0 33 .................................... GTTGCAAGCCGCTGATTTGCCTGTGCAAGCACC 7136 36 100.0 32 .................................... GCTCAAGATCCCCTTGAAGTCAAAGCTCACAT 7204 36 100.0 35 .................................... TTCGGAAAAACTTTCTCACTCAGGCCAACGCGGCC 7275 36 100.0 34 .................................... AGGGCTGTCGCCATCATACCGATAGCGCAGTAAA 7345 36 100.0 34 .................................... AGGGCAATATCCATGCGCCCACCGCTGTCTTTGC 7415 36 100.0 34 .................................... ACTTGTAACAGCCGCCATCGATGGGGCGTTTTTC 7485 36 100.0 34 .................................... TTAAACTTTTGGTTGTACCACCCGCGCAGAACGC 7555 36 97.2 34 ....A............................... CATCATTGCGGATATAGGTTCGCCCGCCGCATTT 7625 36 100.0 34 .................................... GCGTAATTGCCTTGTGAAACACAGCGATACCATT 7695 36 100.0 33 .................................... GTATGTGATTGGTAGGTAATCGCGCCTGTTGTG 7764 36 100.0 33 .................................... TTACGCGCCACCACAAGATAACGCGCCTGCTTA 7833 36 83.3 0 ..........................TTT..TG.T. | ========== ====== ====== ====== ==================================== =================================== ================== 13 36 98.5 34 GTCGGAAAACCTTCCCCATTATTAGGGGATTAAGAC # Left flank : AAGCCGAATTAAACACAGGAGAACTGCAATTATGGAGCGACAACGCTGGCTGATTGCCTACGACATTGCCGATAAGCGCAGATTGCAACGCGCCCGCCGCCTGTTATGCACCCAAGCCCTACCGCTGCAAAACAGCGTTTACCTGTTTCGCGGCAGTCAGGACGGGGCGCGGCAGCTGCTGGCGCAACTGGCAGAACAATTAAACGCCCGTGAAGACGACCTGCGCCTGTATCCGCTGCCGCCCAACGCCCGTCTGCTGACACTTAGCGGCAGCGCCCTGCCCCAAGGCATATTATTAAGCGGCTACGAAGAAGAAAACCTTGCCAACCATTCCGAAACGGGATAGAATGGAACTTTATTTTCTGCTGTGGAAAATGTGCTTCCGACCACATTTTTTAGCTCTTTAAACCGTTAAAAATTGTTTTTGATTGTTAAGATTTGTAGCTTATAAATCGGTACTTTTAAGGATTTGATTTAAAACGGAAAAACAAGGCTCTGCA # Right flank : CTGCTTTCCCATTTTTCCCGCCCAATACAAAACCCCCAATCCAAAAGATTGGGGGTGCTTGTTTGCAATCCGCTTATTCGCCGCGCAATTTTGCCAACAGCGGACTCAATTCCTTTCTGCGCTTATCGTTAATCCAATTGCCCTGCGCCGTTTGCAGCTTACGCGCCGAAAAGGTTTCCGCAATTTCTTTTTTCGCCTGTGCATCCCAATCCGCTTCCGCAGCAGCCGTTAAAGCAGCTTTAAACCGATGGTATAAATCGCTGTGTTCCTGATTGTTGATACCGTATTTGATTGCACCAAAAATCTGACCACGCCATGTTTCCATCCATTGTTCGTGTTCGGGCAATGCCGACAAACGCGCTTGCTCTGCTGCCTGCTTCAGTTTATTTGCCTGCTCTTCACGAATATCGCGGACATAGCGTTGCGCCATTTCATCACCATGTTCGCCATCCGCAAAATAACCATAGCCCGAAGCGGTTTTTGCGCCCATGCCCTGCTGT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAAACCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 17721-18319 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000017.1 Conchiformibius steedae strain COT-280 scaffold_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 17721 36 100.0 33 .................................... AATCCGCGTAACTGAGTAACACTTTTACATCAC 17790 36 100.0 34 .................................... GGACATAGGGATGCCAAATCCAATTCGGGCCTCC 17860 36 100.0 34 .................................... TCAATAGCAGCTTTGGTATCACCAATTGACAACA 17930 36 100.0 33 .................................... CGCCGATTGCCAACATTTGTTCACGGCGAAGCT 17999 36 100.0 37 .................................... TCATTAAATTGGTGGGCTGATGCGCGACCGTCAACAC 18072 36 100.0 35 .................................... TTCTCTAACCTTAAAATAAATTCATTTAAAGTGTG 18143 36 100.0 34 .................................... CCACGTTCGATGCTCAGTTGTTCAGCAAAGTCTT 18213 36 100.0 35 .................................... GCAATATCGGGACGCATCGCCAGCTTGGGGTCACG 18284 36 86.1 0 ............................T..TCCC. | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 98.5 34 GTCGGAACATCTTCCCCATTATTAGGGGATTAAGAC # Left flank : GCTTAAAAAATAGGCAGGTGTTATACAGCTTTTTGCCGTATGGTAAAAAGTTATCCACAGAAATTGTGGATAACTCACCCCAAAACCCCATTTTTTAGCCAAAATTTCAATTGCTTTGCTTAGTTGCTTAAAAAATAGGCAATATTAGTTTTGCCTGATTGCAAAGTTTACGTTTACGCCCAAATAGGTTTTACACACCAGCAAAACCCTTATTTTCAGCCTGTGGATAACTCTGTTAAGCCCATTATTTTTAAGCAAAACCATGCGGAAAAGAAAATAGCAAAAATACTACACCCGCGCCCCATACCCCACAAAATATTTGACAAATCCCAAAGCATTTGGGAGAATGAAGAAATGTTCCGACGACACGCGCAAACGTGTTTTCCGACTGAAAAACGCTCTTTAAAACTGTTAAATATTGTTTTTGATTGTTAAGATTTGTAGCTTATAAATCGGTACTTTTAGGAACTTGATTTTAAACAGGAAAAAAGGCTTCCGCA # Right flank : CGTTCCACCTACTTTTATCCCAATCCAAGCGGTCGGCAGTTTTGCCTGCCGCTTGTTTGTTTTTGCCCTTATGCCCAAGCGCAGCCGCATTTGCCGCTATAATGGCACATCTGTTTTTCTTTCCCCTTTCCCCATGATAAACGAATCGGAACGCCACGCTTGGCTTCAGTTGGCACTCACGCCGCATATTGGCGCGGAAAGTTTTTTGCGCCTGCTTAAACACTATGGTTCGGCAGCAGCGGCTTTGGCTGCGCCTGCGGCGCAGGTGGCACAAATTGCCCGTTATGGCAAACGCGCCGCCGCCGCTTGGCACACCCGCGCCGATGAAGCACGCGCCGCCGCCGATGCCGCTTTGCAGTGGGAACAGCAGGCAGCTTGCCGTTTGCTGCTGCTGGGCGATGCCGATTATCCGCCGCTGTTGGGCGAAGGCATGACCCCGCCGCCTTTGCTGTTTTTGCGCGGCAATGCCGATTTATTGGGACGGGCAGCGGTGGCAATAG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAACATCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 19929-18348 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000022.1 Conchiformibius steedae strain COT-280 scaffold_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 19928 36 100.0 34 .................................... CCTGAAATGGAAGCTGACAGTCGGCAAAACTGGC 19858 36 100.0 34 .................................... TTTCGCTATCGCGGTGCATACACGCTGCTGCAGG 19788 36 100.0 35 .................................... CCACGCAGAGAGGTATGCTTAACCACCTCTGTGCG 19717 36 100.0 32 .................................... GTATTGTTCAGCATCAATATCTTCAGGGTGAA 19649 36 100.0 34 .................................... AACACTTTATCATCAGGATAAGCCGCTTGGTAAC 19579 36 100.0 36 .................................... AACAACAAATGTACCAATAACAGAAAAGCTAATATA 19507 36 100.0 35 .................................... GTTGTGAACAGAGAAGAGAAGTAAGAAACGATAGC 19436 36 100.0 35 .................................... TCGTGTGAAGACGTTGCAGTAAATTCAACAACAAA 19365 36 100.0 34 .................................... TTAGCCCCGTATGCTTGCCCAATGCTGTCAAATA 19295 36 100.0 36 .................................... GGAGATAGAAAAGGCAATGCAATCCTGCATGAGTGC 19223 36 100.0 36 .................................... TTAAACATTCTGTCTGTGGTACACACCACGCGATTA 19151 36 100.0 34 .................................... TACCGAGTGCAACACGCTGGCGTACAAGTACACC 19081 36 100.0 35 .................................... GTGAAGAAAGCTGAGAGCGATATGCGGGCTTCAGC 19010 36 100.0 33 .................................... GTTGCTAATACTCTTGCAACTCGGCTTGTTTCA 18941 36 100.0 32 .................................... GCACAAAACCATACCATTGCCCCAACGTGTAG 18873 36 100.0 36 .................................... TTTGAGTCTTTAAGATACCAAAATACGTTAAATAAT 18801 36 100.0 34 .................................... GAGGCAAGCAGGAAATTATCCGCAAGACAGGACA 18731 36 100.0 34 .................................... AGCGAAAGTAATAACCAAGCGCAATCCGAATACC 18661 36 100.0 34 .................................... AGCTCAATGGTCTCACGATACCAAGCATCTGCCC 18591 36 100.0 35 .................................... GTATAAGCGGCATCTTGTTGCGCACCGAAATTCTG 18520 36 100.0 32 .................................... GCTTACGCGGGCAGGATTCCCTCCGCCACTAA 18452 36 100.0 33 .................................... ACGTTTTCGCGGCAAGTGCCGTACTGACAATGG 18383 36 80.6 0 ..........................AA...GCTGT | ========== ====== ====== ====== ==================================== ==================================== ================== 23 36 99.2 34 GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Left flank : CACTGATGCTGGCAGCTTGCTCTGCCCTACCTTCTTTCCATCATCACGGTTCATCTCACACCATGCCCGCACACCAAACCACCATTCCCAGCGCCTATGATTTTAACGACACCGTCGCCAAAATCCGCCAAGCCGTAGAAAGCAAAGGCATGACCGTGTTTGCCGTGATTGACCACCAAGCCGCTGCACAAAAAGCAGGCTTGCAAATGCAACCTGCTACCGTGCTGATTTTTGGCAACCCCAAAGCAGGCACACCGCTGATGGTAAAAGACCCCGCTTTTGCCCTGCAACTGCCGCTTAAAGTATTGATTACCGAAACAGACGGCAAAGTACAAGTGTCTTACGTTCCCGCGCAACACCTGATTTTAGGCAGCAAAATTGCCCCTGCCGAAGTGGAAAACACCTTGGCAAAAGCCGAAGGGCTGATTCGCGCCACCGTAGTAGCTTATAAATTGGTACTTTTAAGAACTTAATTTTAAACAGGAAAAAAGGCTTCCGCA # Right flank : TCCTAACTTGCGTTTGTTCCTATTCAATTACCCCTGCTGTTGATATTTGGCGGCAGGGGTGTTGTTTGATTTGTATTGACCATAAAAAACCGTCCAAATTTTTCATTTGGACGGTTTTGTTTTGGCGTTTATTCGCTTGCGCGGAACGCTTCACGCATTTCCTTATCCAAACGCGCCGTGCGCCGCAACATCAGATAATTCAAGCTAATCACCAGCGTACCCACAATGGCAATCATAATGGTTGCCAACACATTCATTTCGGGATTTAAGCCCAAACGCACTTTGGAAAAAATCAGTTGCGGCAGCGTGGACGAACCAGGTCCTGATAAGAACGAAGTAATCACCAAATCATCTAACGACAGCGTTACCCCCAGCAAAAAGCCTGAAGCAATGGCAGGGGCAATCAGCGGCAGGGTAATTACCCAAAAGATTTTCAACGGACGTGCGCCCAAATCCATTGCCGCTTCTTCTAATGATTGGTCCAATTCCATCAGCCGCGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAACACCTTCCCCATTATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 40367-39708 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000022.1 Conchiformibius steedae strain COT-280 scaffold_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 40366 36 100.0 30 .................................... CTAAATCAGATTGCACACTATTTTTCATAA 40300 36 100.0 33 .................................... ATTCGCACCTGGTAAGTCTGTGACTAAGATCTC 40231 36 100.0 33 .................................... GGCTATTGGCAATGATGTGATTCTCTGTGATGA 40162 36 100.0 34 .................................... GGTCTGACACATAAATAGGGTATTATCATGTCAT 40092 36 100.0 33 .................................... CGCGAACAACTGTTATCCATTGGTGATACAGCA 40023 36 100.0 34 .................................... ATGATACGGTGGGCGCAGGTTAAATCAGGTGTTA 39953 36 100.0 33 .................................... TCTGCGGCACGGTGGTAAAACTGCGAACTTGGG 39884 36 100.0 35 .................................... GCTGCAAGCCGCGCTTGCCGAAGCATGGGATTATT 39813 36 100.0 34 .................................... GAGTCAGTGGACGAGGGCAACCTTGTCCACAACC 39743 36 91.7 0 ................................TA.G | ========== ====== ====== ====== ==================================== =================================== ================== 10 36 99.2 33 GTCTTAATCCCCTAATAATGGGGAAGGTGTTCCGAC # Left flank : AGTACACGGCACGGAAATTTACGTCAGCTTGGTTGAACCGGGTCCCGTTACCAGCCGTTTTAGCGAACATGCCCTAAATAAATTTAAGCAAAATATTGACATAGAAAACAGCGTGCATCGTGTGGTGTATCAAAACCATTTGGCGCGTTTGGCAGGGCAAACCAAGCCCACGCCATTTACCGTATCGGCTGCGGCTTGTGCCGAAATCTGCGCCCGCGCTTTTACCGATGCCGTGCCGAAGCCGCGCTACCGCGTAACCGTGCCGACACAGGTATTTTGGTGGCTGCGGAAATTCCTGCCCACATCGGTGCTGGATATGCTGAAACGGCGCGCCTTTGCTGCCGAAAAGCGTTGAGATTCAATTAAAAAACACCCGCAGATAGTTTTATCTGTGGGTGTTTTGTTTTATCCCCCACCCTAGCCCTCCCCCGTAAACGGGGGAGGGGATAACGGGGAAGGTGTTCCGACGTTATTACATTTGAAATCCACCTGTCTGTTTT # Right flank : CTACAAATCTTAACAATCAAAAACAATATTTAACAGTTTAAAGAGCGTTTTTCAGTCGGAAAACACGTTTGCACGTGCCGTCGGAACAATTTTTAATTGTAGCATTAGTTTGCTTGTTTGCCAAGCACCTGCCGTGCATTCAAACAGGTGCTTGGGCTTGGCAGCTTTAGTGCGCGGCAGGCGCAGATGCAGGGACGGCGACAGGGGCAATTGGGGCGGAAGCCATTGCCGCTGCTGCCTGTTGCTGCTGCGCGGGGGTGGCGGCGGCAGTGGCAGGATGGGCTACCGGTGCAATCGGGGCAGAGGCGGGGGCTGCGGGCACGGCTGCAGCTTGGGCTTTGGCTGCAGCGACTGCGGCAGCGGTTTTGGCGGCTTGCGCTTCGGGCATCAGCGAGGAATGGTGGCTGGTAATCAACCAGTCTTTACCGTCCCATTTGTAGGTGTAGCTGTAGCGTCCTGTGGCTTTTTCGCCTGTTTTGCCAAAGGTGAAGGTGTAAACA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCCCTAATAATGGGGAAGGTGTTCCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 918-688 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000024.1 Conchiformibius steedae strain COT-280 scaffold_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 917 32 100.0 34 ................................ CACGTCTGTAATATCCTACTCAAACTCGGTAAGG 851 32 100.0 33 ................................ CGCGCCAGCTCGCCGGGCAGGAAACGCAGCTTG 786 32 100.0 35 ................................ GCCAAATAAATCAAATTGGGTGTCGCTCTTGAAGC 719 32 96.9 0 ............G................... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 99.2 34 TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Left flank : TTTGGACGGGCTTGAGATTGTCAGCCAGCCCTATCACGAGCTGCTGCCACCACACCTAGACGACCCCAAAACCCTGCTGGTATTAGACCCGCCTTATGTTTGCACCCAGCAGGGCAGCTACCGCAAAGCGGGTTACTTCGGCATGGTGCAATTTTTGCGCCTGATGCGGCTGGTGCGACCGCCGTTTGTGTTTTTTTCATCAACGCGCAGCGAGTTGCTTGAGTATTTGGATTTGGTGATTGGCGATAAGATGGAGGGCTGGGACAGGTTCAAGGACTACCAAAAAATCAGCCTGACCACCCATATTAACCAACAAGCGGTTTACGAGGACAATTTGGTTTATCGTTTCTAGTGGGATTCATTACCCGATACTTATATAATTAAGTAAGCCACCCTGTTTATAGCAGAGTGGCTTATTAAATTTTGCGCTGTTTTTGTCATGTGTCGCATGACAAAATAAACGCAAAAGCATGTCAAAAATCGCGCAAATTTATATAACC # Right flank : CAAACCCTACTTATAACGTGAGTTCGGGATAAGAAACCAATAAGCATTAAAGGGCAAACGTGTTAAGCTATTGTTTCCACACAAACGCGCACACGAAAGCCCTTTAACATGGATTATCTTACCGCACTTTTCTGCCAAATTGACGATTTTTGCCAAGAATTTGAACCCCGATTCAATAGTTCGTTGATTGAAAGACAAAAAACCCGCAAGCGCAAAAGCTGCATCAGTACGGCTGAAATCATGACCGTTTGGATTTATTTCCACCATTTGCGAATGCGCGATTTTAAAACCTATTACCTGTGGCAAATCAAAACCATGTTGCGTGGGGAATTTCCCAATATGCCCACCTACAGCCGTTTTGTGGAACTGGCGCAACGTGCCTTACCTGCCATGTTGGTCTTTTTAAAGACCGATGTGGGTGTAGTGGATTCCACCGCCTTGGCAGTGTGCCATAACCGCCGTATTCATTCGCACAAGGTGTTTAAAGATATTGCCAAACG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 47328-65493 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYC01000008.1 Conchiformibius steedae strain COT-280 scaffold_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================= ================== 47328 32 100.0 35 ................................ AAATCCTAATGTTAAATCACGGAATCGCTGTTGCC 47395 32 100.0 36 ................................ CGCCATCGAGTAACCAGCCCGCTAAATCCTGCTCAT 47463 32 100.0 36 ................................ ATGCGCCATTAACCCTAACGCCTTACACGCATCGGC 47531 32 100.0 36 ................................ ATCAAGCTAAAAATCATGGCTATGATGATTTGACTA 47599 32 100.0 35 ................................ CTTACCACAACCCTGACGGCAGCATACGGCGTGAA 47666 32 100.0 33 ................................ TGCCCTTTGGCGAGGCGGCACAGCAGCCTTTGG 47731 32 100.0 35 ................................ CATGTTATCAATCCTTTATATTTGGTTAGGCAGTG 47798 32 100.0 35 ................................ TACTTGGCGGCATTTAAGCCCGCCATAGTTTTCCA 47865 32 100.0 36 ................................ CGCGAACTAGACAACCGCCGCGATAAGGCTTTGTAT 47933 32 100.0 35 ................................ TTTGGCGGGGTAGGGCGGTTTTGTAACGGGTTTTG 48000 32 100.0 34 ................................ CTTATATCGGCAAAAAATCAATCATACAACATTT 48066 32 100.0 33 ................................ CCCTGTGTCGGTGTCTTCCCTGTTGCTTGCGCT 48131 32 100.0 33 ................................ AAAATGGCAACCAATCTGCACAATAACATCACT 48196 32 100.0 35 ................................ CACTCCAACCAAACTATATCCACGCGCCAGTTTTC 48263 32 100.0 33 ................................ CGCAGCGGCTGCTTTTGCTATTACCCACGCTTG 48328 32 100.0 35 ................................ ATTAGCTCTGCTCCCAATACCCCTTTAAGGAATAC 48395 32 100.0 33 ................................ GGGGAACCAAGTCCGCAACCAACGCCCGTCTAC 48460 32 100.0 35 ................................ CGCGCCACGTAGCTAAACAGCAGATAAGCCGCCAA 48527 32 100.0 34 ................................ ACCATCCAATGTCTCTAAATGAGGTACACCCTCT 48593 32 100.0 36 ................................ CCGCGCTGGCATAGCCGTACACCTTAATGCTGCCGT 48661 32 100.0 36 ................................ TATTTTATCTCAGGTATATATTACTAACATGAGTAA 48729 32 100.0 34 ................................ CTCCTCAATGAGTTTTGCGAATCCAACAAAAAAC 48795 32 100.0 36 ................................ AGGAGTTCCACTGTTTCATCCATTTCGTCTTTGGGC 48863 32 100.0 34 ................................ CCCACCTTTGGGATACTTATTTTCTTGTTCAAAC 48929 32 100.0 35 ................................ CACCGCTTCTTTACAATGGTCAAGGCGATATTTTT 48996 32 100.0 35 ................................ TACGGTACTACCACCCATAGTCAGATTGAACATTT 49063 32 100.0 35 ................................ TATATGTACTTTCCCGGTGTGGAATAATGAAAACG 49130 32 100.0 35 ................................ ACATCTATGGACATCCAAGGCGAAGCCGTCCCCAT 49197 32 100.0 37 ................................ CGCAAGAATGTCAATGCGCGACAAAGCACGGTAACGG 49266 32 100.0 35 ................................ ACTTCCAACACATAAAAATTCTTGCGGCTTAACTC 49333 32 100.0 35 ................................ ACCGCACACCAGCGCAGATTTACGCACAAGGCGGC 49400 32 100.0 34 ................................ TGATGGCGAAAGTGTAACTGCATATTGCGCGAAT 49466 32 100.0 36 ................................ CAAAATACTGCGGTTAAAATCCCCCAAGCGGCGGTG 49534 32 100.0 34 ................................ GCACCGTCAGCGTCAGCAGCAACCAGCGCGCTCG 49600 32 100.0 34 ................................ TGACATCTTAAGCTGCATTGCCACAGCACAAGAA 49666 32 100.0 35 ................................ TCCGTTGAGCCGACCCCTTTTGTCGCCCAAGTTAA 49733 32 100.0 34 ................................ CGAACACGGCGCATTGCCGCATTGAAGCTGCGTT 49799 32 100.0 36 ................................ AAATCAGGAAGACAGCACTCCTGTATTGGGTGATTT 49867 32 100.0 35 ................................ GTACTCTTACCAAGCACATAAGGTTAAAGTTGTTA 49934 32 100.0 35 ................................ ACCGGCATGGTGCAAATCAAGTGGGACGGTAAAGA 50001 32 100.0 35 ................................ CATGTTTTTGACCGCCCTGATGCCACATTAAGCAG 50068 32 100.0 35 ................................ ATGACTGAAGCGGGTGAGCATTATCGCAACGGCAA 50135 32 100.0 35 ................................ AAAAGGGCATTTAGCCGCTGATACAGGTTCAACCC 50202 32 100.0 35 ................................ AGGTGTAGCCTTTACCACAGCTTTACACGCACCTG 50269 32 100.0 37 ................................ TCCAATATCGTATTGCAACATATTGAAACTTATACCG 50338 32 100.0 36 ................................ AACCGTGGTTTGGCGATGATGGCTACGGGTAAACAG 50406 32 100.0 37 ................................ ACTGACCCCATCTCCGATTTGGAAAGTAGTACGCAAG 50475 32 100.0 36 ................................ GCAGCGATGAAGGTAAGCAATGGGCTTTGAATATTG 50543 32 100.0 35 ................................ AGGGGGTGTGGTTGGGTTAGCACCAAACGAAGTGC 50610 32 100.0 36 ................................ ACAGCTAATCTTGTCGGGATTGAGACGTTTGGGCAT 50678 32 100.0 35 ................................ GCCACGGGCGCAAACCCATGGTGTTTTTTGCTGAC 50745 32 100.0 34 ................................ AGGTTAGGGGTGGGGCAGGGCAAAATCTCATGAG 50811 32 100.0 36 ................................ CAACTGGGCTTGCAAACAGCGTGCCTGTTCCAACAG 50879 32 100.0 33 ................................ CACAACGTTTTTCGTTTTTTCACTTTGTTTTCG 50944 32 100.0 34 ................................ GCCAACGCGCAAACGGACAGCCGCGAAGCGGCGG 51010 32 100.0 35 ................................ ACATGGACAAGGCAAAAATCCTCTTCCCCTGCTGC 51077 32 100.0 36 ................................ ATTTAATACGCGCCCAAAATCGGGCGCGTGAAGTGA 51145 32 100.0 35 ................................ AATGATGTTGTTCAGGATTGGGCTTGGTCGTTAAG 51212 32 100.0 36 ................................ TGCAATGCGTCTATGAAAAAATGGCTCAATCGCCAC 51280 32 100.0 35 ................................ ATTAGAGCAGCAAATCGGTGGGCGTACATACTTTT 51347 32 100.0 34 ................................ GCCGTGCCTGATTTGGCTGTGCTTGAGCCGCTTG 51413 32 100.0 36 ................................ TTTAACAACACGCAGCCGCCCTAACCCAATCAAGGG 51481 32 100.0 36 ................................ CCATTCCGCACGTTCCCGCCAAACGGTAATGTGCCA 51549 32 100.0 35 ................................ ACACCAAAATATGCCAGTACATCAGCATCGGATTG 51616 32 100.0 36 ................................ AGGGTACCATCCTTTTGGCGCACCTACCCTTGTCAA 51684 32 100.0 35 ................................ AGTAAGTGGCACAAGTTAAAGGATTTTAATCATGT 51751 32 100.0 33 ................................ GGGACTGGTGGGAAACATCCAGTAATGGCGCAC 51816 32 100.0 35 ................................ AACGGTTTTGTCGGCAAAGCGCGGCGGAATATCCG 51883 32 100.0 36 ................................ ATGTCTATATCCTTTGATAAAGTAGGTTAAAAGTTA 51951 32 100.0 35 ................................ TATCCCAGATCCACAATATCCTCGCATTCCAGCAG 52018 32 100.0 36 ................................ CCGCAATACATACTGCGCCCATGCTTCAACCTTATC 52086 32 100.0 36 ................................ GCAGGGTAAATACGGACACAATGCCGCATCAGGTGG 52154 32 100.0 34 ................................ GTTTGACGAAACCAGAATATTGAACCAAAGCGGC 52220 32 100.0 34 ................................ AGCCTAAAAAACATAGGTGGGGAACTGTGTGTGG 52286 32 100.0 38 ................................ AAACGGTGCAGCAATCGGCACAGCAAGCCCAGCAGTCT 52356 32 100.0 35 ................................ ATGGTTTCGCTCCAAAAGTAAACCGCCCTTTCGGG 52423 32 100.0 33 ................................ GTGGCGGCTAACTCTATGTTAGCTAGGGATTGT 52488 32 100.0 36 ................................ ACAAGCAGTCCGCACATCTCCTGTCAGTAAATCAGG 52556 32 100.0 37 ................................ CTTTGAACAAGCCGAAAACGGAGAGTTTTAATCGGTA 52625 32 100.0 36 ................................ ATATTGTTGATTATTTATCTGTTTATCTTTGTGTAA 52693 32 100.0 36 ................................ TTTAACAACATGATTTTGTGGCAGCTAACTCTATGT 52761 32 100.0 36 ................................ GGTGCTAGGGGCGCAGGGGTAGGGTTACTGCGGGGC 52829 32 100.0 36 ................................ TCGTCTTGGTTTTGCACAGCAAAGAACTGTAAATTA 52897 32 100.0 33 ................................ GCTATCAGAAAGGACAGCCTATGCCCGAACCAA 52962 32 100.0 35 ................................ CAAGTCCTCTTGCCCGTAATGCCCGCCATGCTCAC 53029 32 100.0 33 ................................ ATCGCCCGCCGCTCGTGTCTGCTGCTCGCGCAC 53094 32 100.0 36 ................................ CACCATTACGGGCATTGACGTAACCCGCCGCGTTAT 53162 32 100.0 34 ................................ CAAGTAGACTTTACCGTCTGCCTGATGCACTTGG 53228 32 100.0 34 ................................ CCCTGCCGTCCAAGCCTGTTTTTTGGCTACATAA 53294 32 100.0 34 ................................ AAATGATTATTTGGTATGGTTTGATAATCATACC 53360 32 100.0 34 ................................ ATAAAAGGCATCTTGGACGTGATAGCGGTATTTC 53426 32 100.0 35 ................................ GCGGTTTATCGGGCGGCGGCGGTGGTAATGAGACC 53493 32 100.0 35 ................................ GTGGAAACCGAAGCCCTGCACGCCGTAGCACGCGG 53560 32 100.0 34 ................................ GACCGAATTGCAAACGGCATCTTTATCCAACGCC 53626 32 100.0 36 ................................ ACGCAGCCATTCGGCGGCGGAAGCATCAGGCAACAA 53694 32 100.0 34 ................................ AGGTTGGCATCGCCGCTGTTAAACATCGGCAAAC 53760 32 100.0 35 ................................ GCGGTACATGATTTAAATCCTTTTAGCCAACCAGA 53827 32 100.0 35 ................................ ACAATCAAGCCACCCGCCAGCCCTGTACACTGCAC 53894 32 100.0 35 ................................ CGCAAATACGATGCGGGGGAAATAAAGTTTGACAA 53961 32 100.0 34 ................................ TGAATTTGTAAACCTAATCACTGTGATTAAAGAA 54027 32 100.0 34 ................................ TGATGCGAGCGGTGTTTGGTTTTTACCGAATTGC 54093 32 100.0 35 ................................ CGTCTCTAAAATTTTGTGCGGGGTCGCACTCAAAC 54160 32 100.0 34 ................................ AATCTTTTGTTGTTTGCGAATTAAATTGCGTTTA 54226 32 100.0 34 ................................ AACTGCCACGAACTTACCACGAATGCACATAATA 54292 32 100.0 36 ................................ TGGTAATAAGTCAGTTAATTTGGCATAGGTAATTTT 54360 32 100.0 35 ................................ AATCTCGGTGTCGCGGGTGCGGGCTAACTTCTCAC 54427 32 100.0 35 ................................ CTTTACGCATCAACAAAACGTTTTTCTAATTTGGC 54494 32 100.0 35 ................................ AGCTGATGAAGTGAACGCAGCACTTACAGATGAAC 54561 32 100.0 35 ................................ ATGCGGAATGTTCGTGTTAATCCACTGTTTAAGTT 54628 32 100.0 36 ................................ ATTTCAGCCGCACGGCGAGAAGCCAAGCTATTATTG 54696 32 100.0 37 ................................ CAGTTATGAACACGCTGCGGACTACACCCCAGCTTTC 54765 32 100.0 37 ................................ TGACTTTGCACACGGGGCATTAGTTAGGGCGCGTGAG 54834 32 100.0 34 ................................ GAAAATTGCCAAATTTGCAAAAACTCACTCGCAC 54900 32 100.0 35 ................................ CCTTGGAACATGAAACCGTAGTAGGGGTTATGGCG 54967 32 100.0 33 ................................ ATTATAATATGCCAAAGCCTTATTGAACACAAA 55032 32 100.0 35 ................................ AATTGAGCAAAATATCTCTGTTTAAACCAACATAA 55099 32 100.0 36 ................................ GCAAAAATTATTGCTGATACTATTAATCCATATACA 55167 32 100.0 36 ................................ AAATCTTCCGCGCCGTTTTTGTCCTTATACCGCCAC 55235 32 100.0 34 ................................ GGCACTATCGGGCTGCAAATCAGGGCGTAGGTGG 55301 32 100.0 36 ................................ CCCTACAACTTGGTTTTAGGGTGGGGATAAAAGAGC 55369 32 100.0 39 ................................ AAGGGGTGTATGCTCAATGATGTTGCAGGATTCGCGGTG 55440 32 100.0 34 ................................ CACAATTTGATGCACCTTCAAACATTTGTTCTAA 55506 32 100.0 34 ................................ TAGTATCTTTGATTTTTTGTGCTAAAGAAATAAC 55572 32 100.0 36 ................................ CGCAGGGCGCGGGACAGGTGCGGGATTGAGAATTTG 55640 32 100.0 35 ................................ CACTTGCTACCAGAAAGGAAAGCCTATGCCCGAAC 55707 32 100.0 41 ................................ AGGTAAACCGAAAAATGTAACCGTTAGCCAAAAATGCGGCA 55780 32 100.0 38 ................................ TTGGCGCGGTGTGGGAAGACCGTGGTGTAGTCATCTAT 55850 32 100.0 35 ................................ CGCCAATTCGTCTGCCCGCCAGCAGACGTTTTCAA 55917 32 100.0 34 ................................ ATGATTGGCTGCCTGTGGGTGCGGACGTGGGTAA 55983 32 100.0 35 ................................ ATTTTTTATCAAGGAGTAAAAAATGTCCACAGAAA 56050 32 100.0 34 ................................ AGAGTAGGGGTTTTGGGGGTGCGGGTGGGGTTAA 56116 32 100.0 35 ................................ GTGCTGAATTAGAAAAACGTTTTGCTGAATAATTT 56183 32 100.0 36 ................................ TGCTGGCGAGAAAACCCGCTACACGTTTGACGAGTT 56251 32 100.0 35 ................................ ATCAAGTGTGTACATGGATATGGCAAAGGCAAAGG 56318 32 100.0 36 ................................ CGATACACCTTGCAGGCTACCCGACAGCAATTGCAC 56386 32 100.0 36 ................................ TTTTCATGGTTTCCGCCATTTTGTCTATGTTTAAAA 56454 32 100.0 33 ................................ CTTGCCGTTTTCTAACAGCTTCGGAACGTGTGT 56519 32 96.9 33 A............................... ATCAATCTGCTCTTGTGAGGGAAGCGGTGGTAA 56584 32 100.0 38 ................................ TGCGCCGCTTGCAGAAGTTTTACCAGCATGGGTAGTAG 56654 32 100.0 35 ................................ ATACACCAGCAACATTTGTTGGTTTGAAAACTTTG 56721 32 100.0 36 ................................ AGCCTTTGAAACAGGAAGAAGTATGCCTACTTTTAA 56789 32 100.0 35 ................................ GTCCCGTGCCGTGGTCTTTTTGGCAGGCGCGGGCA 56856 32 100.0 36 ................................ CCTGATTTCGGGGGTCAATTCATGCGGTCGCCCGAC 56924 32 100.0 36 ................................ CGCTTATTTCGGCCTGCATCGGGACACACTGTGCTG 56992 32 100.0 37 ................................ AGGACAAACAAAGCCAAAAAGACACCTTCGTCAGCAA 57061 32 100.0 35 ................................ GATGCCGTACATGACGAACTGGCCGCGCAGGGCAT 57128 32 100.0 36 ................................ TGACACAGGCGGCGCAATGGGAAATTGAGAATCTGC 57196 32 100.0 35 ................................ ATTAGTAAGTAAGAAGAACTTATCAACCAAGCCTT 57263 32 100.0 35 ................................ CGCCGCACTGATAGTGATGTACCTGCGGGCGCGAT 57330 32 100.0 35 ................................ TAAACGACAAGGGCATTGGTACAGCAGCCACCCGT 57397 32 100.0 35 ................................ AACAGCCATAATGAACAAGCACTGCCCACCACTCA 57464 32 100.0 36 ................................ TGGTCCACATCTGCATTTTGAAGTATTGGACAACGG 57532 32 100.0 36 ................................ ATATTATTAACGCTCCATCTTTAATTGTTGCTCCAG 57600 32 100.0 33 ................................ TTTAGCCGTCCATACCAGTTGCGCCAAAGAGAA 57665 32 100.0 36 ................................ CGCCGCTCGGAAACCGAAGAAGAAAAATTGCTGGTG 57733 32 100.0 34 ................................ CCATCATTTACCGCATCATCAAGCCTGAAAGATT 57799 32 100.0 35 ................................ GGTTTGAGAATGAAGCTCGTCAATTTGACGTTTTG 57866 32 100.0 37 ................................ AGCCCAATATTGGTCTCGGTGTTGCTCAATGGCATCG 57935 32 100.0 38 ................................ ACGCAATTTGGCTACTGTTACTTTTGGGACTTTAGTTG 58005 32 100.0 36 ................................ AAAAGTGAACCAGTTCAGAAAGTGAACGGGGGTAGT 58073 32 100.0 36 ................................ GCCAACACACCATTGGCTTGCGCGAACTGTTGCTGC 58141 32 100.0 34 ................................ TCGCGGGCTTTGCGGTCGCCGTACAATACCGTCC 58207 32 100.0 38 ................................ GGAAGAAATTGAAAACGCGTTTTGCGTTAAGTTTGAAG 58277 32 100.0 33 ................................ AATGTCAATGATAAGTGCAATTGGAAACCTTTT 58342 32 100.0 34 ................................ TACAAAGACCTTAAGAAAATGATTAAGAATGGTA 58408 32 100.0 35 ................................ ATGAGCCACACCATTATCAAAACCGATAGCGGCAA 58475 32 100.0 34 ................................ TAATGAGTTTTTAACCCTTAACGACACTAAAAAA 58541 32 100.0 36 ................................ TCTTTGTTTGGCGCAACCACTAACGATATTTCAAAA 58609 32 100.0 35 ................................ CATAACGGCAAGCAATACGCAGCTTTGCCTGATAC 58676 32 100.0 36 ................................ CGCCCCCTTACGGGGGCATGGGTTTATTTGTGGTTA 58744 32 100.0 35 ................................ CAAAGTAACCTACAGGATAAAAAAGACTGCCAAAA 58811 32 100.0 35 ................................ AAGTTTCCACAACTGCTCAAAGGCGTTTTTGTATG 58878 32 100.0 35 ................................ AATGCCGAAGTTTCGGCATTAGAAAAACAGGGCTA 58945 32 100.0 34 ................................ AGGCGGCACGCTTGGCGTTTGGTTTTGCAGGTAT 59011 32 100.0 33 ................................ CAAACCCTACTAATTTGACTTTTCGGGCTTTTT 59076 32 100.0 36 ................................ CGTGGGGAGTTGTATCAGGTACTTTGAAAGAAAGGT 59144 32 100.0 37 ................................ TTGCCGTACCAGCGCAGATATTGCCCTTTGTATTTGC 59213 32 100.0 38 ................................ CTACGCACTGATAGTGATGTACCTGCGGGCGCGATTGT 59283 32 100.0 36 ................................ AATATGATGCAAACGGCGGCAAAGAAACGGTGGAAA 59351 32 100.0 35 ................................ TCCTGAAATGATTTTTTCTACAAATTCAGGTTTGA 59418 32 100.0 36 ................................ AAAAATCGTCAAATTTGCAAAATCTATCACAGACCG 59486 32 100.0 37 ................................ GCTGCACACATTACCAACAGCTAAACGCTTTAACAGG 59555 32 100.0 35 ................................ AACCAAATTTGGTGCGATAGCGCATCTAGTTAAAA 59622 32 100.0 36 ................................ TTGCAAATGTGCTTGGCGTTGTTAGACGTTGTAAAG 59690 32 100.0 37 ................................ CAAGCTGCCAGTCCTTTGCGGCGCAGGGTTTCTACTA 59759 32 100.0 36 ................................ ACAGCAGCAACGGTGTTGAATCCCCTGATGCGTTGG 59827 32 100.0 34 ................................ AAACGGTCGTCAATAACCGTCAGCGACAAATCGT 59893 32 100.0 36 ................................ ACATGCTGCCTGTACCGAAACGGGTAAGCGCGGCAA 59961 32 100.0 35 ................................ GTCTGTCTTTTACCGCGTCAGAGTACAAATTGTTG 60028 32 100.0 35 ................................ CAAACAAAGGATAAGTGATGAATAAACATTTGCAT 60095 32 100.0 34 ................................ CTGTTCGGAATACTGCAAATGCAGTTCCGCCACC 60161 32 100.0 38 ................................ AAATCATAATCAATAGCGGTCGCCACTGCTACAAGCAC 60231 32 100.0 36 ................................ AACAAAGGCGACTATGAAGGTCATGGATTTGACTAC 60299 32 100.0 35 ................................ CGCAAAACCTATTAAATATGCCAATTTTTTCCCAA 60366 32 100.0 34 ................................ TATGCCCGAACCAAAAGCCATTGCCCACTTGCAA 60432 32 100.0 35 ................................ GCCGACATCGCCGTTGCCAATCACTTTTGCCAGCC 60499 32 100.0 35 ................................ GGGTTTTCATTCTGCAATCAATAATATGACGGCAG 60566 32 100.0 37 ................................ CTGCAAATGTGCTTGGCGTTGTTAGACGTTGTAAAGC 60635 32 100.0 34 ................................ AGACGATGCGAATGGTACGAGTGCGCCCAATTTG 60701 32 96.9 37 G............................... CATCACGTTTTTGCTGTTGTCGCCGTTGCCGCTGCAC 60770 32 100.0 37 ................................ AGATGGTACGAGTGCGCCCAGTTTGGGCGCATAACGG 60839 32 100.0 34 ................................ TGCCCGCGTAAACAAGAAATCTTATACCAAGCAG 60905 32 100.0 34 ................................ ACGTCCGCACCGTTTGACATGATTTCCATCAAAT 60971 32 100.0 35 ................................ TTTACCCGTGATTTGGGTTGGAAACAAGAACTCGC 61038 32 100.0 34 ................................ GCGCTGCCCGAAGCCCCACTGCATCAGCGTTTTT 61104 32 100.0 35 ................................ TAATGCAGTCTTGGCAATATCAATAAAATGAGTAT 61171 32 100.0 35 ................................ AAGAATGCGGGCTTGTGTTTGGCGCAACTCAACCC 61238 32 100.0 35 ................................ CGCCGTCAAAACCCTGCAATTATGGGATTAAATAT 61305 32 100.0 34 ................................ ACATAGTCCAAATCACGCGCCGTCAGAATGCCCG 61371 32 96.9 36 C............................... TCAAAGGACGAACCACTCAACAAGTTTTAGCCCTAC 61439 32 100.0 36 ................................ CATCAAATCAAAGTATGAAACGGTTTTGATAGCTGC 61507 32 100.0 35 ................................ ATCAGCTTGGCAGTAATGGGGCAAACCGCTCACGC 61574 32 100.0 35 ................................ GCACGCTGTCGTAGTGCAGCACCGTGCCGATGTAA 61641 32 100.0 35 ................................ CACACATGGAGCAGGTGGCACAACTAATCTGACTG 61708 32 100.0 36 ................................ CCTGATTGGCACAAACCAAAATACCGCCAGCCAGCA 61776 32 100.0 35 ................................ GCCTGCGGGGACGAACAGCAGTTTGCCGTTTTTAA 61843 32 100.0 33 ................................ ATCAACACCTTCCGCCAGCAGCATCGCCACAGC 61908 32 100.0 34 ................................ CCACTCACTAGGCTGGAAAGCTCCACGCAGCTGG 61974 32 100.0 34 ................................ AGACTGTTTGTCGGGGCGGGGTGTGGTGGTTACA 62040 32 100.0 36 ................................ AATAAAACGCTGCTGTTTTGCCGTTAGTTTGGATTC 62108 32 100.0 35 ................................ ACTCAAATGCGCGTCCAAGTTTTCAGATGCGTGTT 62175 32 100.0 34 ................................ AACAGCATCTGCCAATGCAGCAATGTCCAGCCCG 62241 32 100.0 37 ................................ TAATGCAATGGATGCACATTTTCAAGCTGGTAAACGA 62310 32 100.0 36 ................................ GCCCAGTTTGGCGATTGGCGCAGGGCTTTGTCTAAT 62378 32 100.0 37 ................................ AACCTGTTTGTGGACGGCGAAAACCAATACGGCGTAG 62447 32 100.0 37 ................................ ATCGTCAAAACCCAAATACTCAAGCATATTGATACAG 62516 32 100.0 34 ................................ TACATCGTCCCCGTCAGGCACATCGCCCCACATG 62582 32 100.0 36 ................................ TACGGCGACGGCTTAACTGCCGCTCAAGATGGTTGG 62650 32 100.0 35 ................................ TGCTGCCCGGACACGTCCGCAGCGATGCCTTTACC 62717 32 100.0 35 ................................ AAAGCCAAAACCGCCGTATTGATTGAACACGACCC 62784 32 100.0 35 ................................ AAGACAGGGGAAACATGATTTAAATAAATTAAATA 62851 32 100.0 35 ................................ AGATTTTAGGGTATGGAAATAATGCAAACACAAGT 62918 32 100.0 34 ................................ GTAGCCGCAAGACAGCTCTTTGCTGCCCGCGTCC 62984 32 100.0 34 ................................ AACTATCTATATTGATATATTGGAAAAAGGCAAA 63050 32 100.0 35 ................................ CCAAGCCGCTATCGCCCACCAAGCCGTCAGGCGAA 63117 32 100.0 35 ................................ ACAATGCACGATTACCTACAGGATATGTATGGGAT 63184 32 100.0 33 ................................ TTGCGCTGGAAATCGCCGCAGGTTACGGCGAAA 63249 32 100.0 35 ................................ GCACGCCGCCGCCAACACCAGCCGCGAAAGACTCC 63316 32 100.0 36 ................................ TCACTTCCGACCAACCCACTGAATTAGTTAGGGAAC 63384 32 100.0 35 ................................ CCTTAAAACCCTGACAATAAAACTTGGTCCGATAA 63451 32 100.0 35 ................................ AACCAATCCTGTGCGCTGTCCCTGCGGTTGCTGTC 63518 32 100.0 36 ................................ CGCGCTGGGCTGGTCGTCTAACCAGCTTTCGCGGGG 63586 32 100.0 35 ................................ TCGCGGGACGGATAGCACACACCGTCATCATTGGC 63653 32 100.0 35 ................................ AACAGCCTTCAGCGATAAGGGAACATCACGGCTGC 63720 32 100.0 36 ................................ AAAAGTTACAAACTCGGAGTCTTTAAACTCGTTACC 63788 32 100.0 34 ................................ AATTAGGAATAAAGATGTTATTTGATTTTAGTAA 63854 32 100.0 35 ................................ TCTACGGTTTTATCTTTAATCCATACTCACCCCAT 63921 32 100.0 35 ................................ AAACGTGCGGTCAGTAAATAGTGCATCGGCATAGG 63988 32 100.0 35 ................................ CAAGTCTGATGTAGTACGGTTGGCGACTTCCAACA 64055 32 100.0 34 ................................ TCTAAACCACTTAACATAAAGGACTAATACTATG 64121 32 100.0 36 ................................ AGACGGCGGCGGCGGACAACGGCAAACGTTACATCC 64189 32 100.0 37 ................................ AAACGCATCTGCCAAATATGCAGCGTTACTGAAACAG 64258 32 100.0 34 ................................ GCGTTTGCTGTCGGCATCAGCCCACAAAATCACG 64324 32 100.0 33 ................................ AGCATTGATGAGCTGCGCGAAATCTGCGGCTAT 64389 32 100.0 36 ................................ TGAGCCTGTGCGTGATGACCCTGATTGGAGTAGCAA 64457 32 100.0 35 ................................ ATCCTGTGCCGGCGGCGTGGGGGGCTGGGGGGCAT 64524 32 100.0 36 ................................ GGGTGCGTGTGCCAACATCGGTTTGGGTTAATCCGT 64592 32 100.0 35 ................................ GTGCAACAACTCAAGTACAGGCTCGGATAACGGCA 64659 32 100.0 36 ................................ ATGCTAAGATAGCGAATAATCGCAGAGACTATTTAC 64727 32 100.0 36 ................................ TAACCGGTAGCCCTGTGCCATTGGCGCAGGGCTTTT 64795 32 100.0 36 ................................ GCCCAAATCTGATGTTCGCGCCAAGGGTTTGGGTAT 64863 32 100.0 35 ................................ ATACGCGCGCTCAAACTCCCAAATCGGGGCGGAGG 64930 32 100.0 36 ................................ GTAATTGATACAATAGATATGTGCTTTCTTCTTAAG 64998 32 100.0 35 ................................ CGACCGACCTGCCCGCCCGTGTAGATAGCGTGTTG 65065 32 100.0 34 ................................ GGCTTGAGCAGGATTAAAACCGATTACCCCGTCA 65131 32 100.0 35 ................................ ATTAACATGGCGACCACACTCGCAGTTTTGCCGCT 65198 32 100.0 35 ................................ AACCTGCTACTTTTTAAAGGATAAAAACATGAAAG 65265 32 100.0 35 ................................ ACAAAGCCGCTTGGGGCAATGAATTTGACCGCAAT 65332 32 100.0 32 ................................ ATATACCGCCATTGGTATGATGGCGACTACCC 65396 32 100.0 34 ................................ GGTTTTTAATAGGGGTAAAACGTGAGTACCAAAG 65462 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================= ================== 271 32 100.0 35 TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Left flank : TGGGGAGTAAGTGATTGTGTTAATGTTGATTACTTATGATATTGCTTTGGGTGACGAGCAAGGTGAAGCGCGTTTGCGCCGTGTGGCAAAGCTGTGTTTGGATTACGGGGTGCGGGTGCAGTATTCGGTGTTTGAATGCGATATTGCGCCTGACCAATGGGTAGTTTTAAAAAATAAATTATTGCAGACTTATTGCCCAGAAACAGACAGTTTGCGTTTTTATCATTTGGGCAGCAAGTGGCGGCGCAAAGTGGAACATTTTGGTGCGAAACGGGCGGTAGATGTGTTTCAAGATACTTTGATTGTGTGAATCGCTAACGGGTAGTACACAGGGTTTTGCCGTGAGGTTGGCGATTTTGCTAGGTTCTTTAACAATCAGGATATTATGTTAAACCAACCCAGAGAAATCATGGCTGTGTTATACTGGGTGGGTCTTTTTCGGAAGGTTTGGCGAAATACAGGTCGCAAAGCCTGATGGAATCTGGCTTCTGGAAGAGGCT # Right flank : CTTAATCACGCTAATTGTGCTATATAGGCTAACCTATGGGGTAGTGATAATTATGTCATAGGGGAAAAGGGGAAAAAATTGGCGAAAAATTTAAGGTAATCAAAAAACAAGACGAAAATCAGGCGAAAATGCAAATTGGGTAAAACCGCGCAAAAATGGTCAGAATTTGGGCTATTTTGCGCGGTTTTTGTCATGGAATGGGCTGGCTATGGGGAAAAATGGTCAGCCTGCTACGCCTGCACTCCATAAATACTTGCCGTATAACTCAAATTCGTGCGGTTCAAAACGACTTAAGTCCAATTCTACGGTGGGGTAGATGCTTTTGTTGGGGTTGTCGCTGATGATTTGGTAGCGGTCGGGGGCGGTGCGGACAAGGCGTTTGACGCGAATCTCGTCGTATTGGCGGAACAGGTACACGCCTTCGCCTGTAAAGCGTGCTGTGGCGTGCCACAGCACGGCTCCACGGTCAATCAGGGTGGGAAACATACTGTCGCCTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //