Array 1 135988-139713 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBI01000092.1 Campylobacter concisus strain AAUH-35UCf 1101450, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 135988 30 96.7 34 ......T....................... AATTTCTTGTCAAAATCTTTTCTTTCAGCGTCAG 136052 30 96.7 35 ......T....................... ACAAATTTAGTTAAGAAAGTCTTTTTTGGCTCAAA 136117 30 100.0 37 .............................. TACTGAGAAAAATAGATGAAAATGTAAATACCCTAAA 136184 30 100.0 36 .............................. CTTAATGAAGCCCTTAACTCTACGAGCAATCATAAA 136250 30 100.0 37 .............................. CTGCCTATCTCTCGCAAAGGTTGGGGGCTGGTATTAG 136317 30 100.0 34 .............................. TTACATAGGGCTTGGTATTTTCTTTTTGTATACG 136381 30 100.0 34 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGT 136445 30 100.0 34 .............................. GTTTTTTGGTCTCTTTCGCTGCTTCTTTTGCTTT 136509 30 100.0 34 .............................. TCTGCATATTGTGTAGCCAGCGCTGCTTTTGGCG 136573 30 100.0 38 .............................. TGGCGTTGATATTGGCGTGCTTGGCGAGCAAGTGGCTT 136641 30 100.0 34 .............................. ATATCATCGCCACAAACAGTATGGACAATACTTG 136705 30 100.0 34 .............................. CCTTTGTTCTGCCTTGTTTTGGTAAGCCCCCTAA 136769 30 100.0 38 .............................. GTAAGCACGTAACCCTTAGCCCGTCGTCTGTCTTTTCA 136837 30 100.0 38 .............................. GAAAAATCACGATAGGGCATAAAATAATGCCTAAAACT 136905 30 100.0 37 .............................. AAATATGGTAGCGTGATAAATGCAGAGGGTGGCGAAA 136972 30 100.0 35 .............................. AATAAAAATTAAAAATGAAAGAATTTCAAAGAATA 137037 30 100.0 35 .............................. AGATCGATACGCCTTAAATCATAATCAGGCAATTT 137102 30 100.0 35 .............................. ACAGCGAAAAATACGCCATAAGCAACAAGAACAGC 137167 30 100.0 35 .............................. ATCGCACTGGCTACAAGTCCAGCCGTATTGTTATC 137232 30 100.0 37 .............................. GCTTTTTGATGTCGTTTGTCGTGAGGTAAATTCTATG 137299 30 100.0 35 .............................. CTCCTCTTTGTAATTTTCAAAAAAACTTAAAAGGC 137364 30 100.0 37 .............................. TGCTATTTGTTCGTAAAATTTCCACGCTGGCAAGCTC 137431 30 100.0 35 .............................. TCAGAAAGAAAAATATGGGAACCAGAAAAAGAAGA 137496 30 100.0 35 .............................. GCAACCTTTGATAACTTTTGGCTATCTCTTGGCTT 137561 30 100.0 37 .............................. AGCCTTTTTTTCAAAAAACAAATTTTAAATATCCAAA 137628 30 100.0 36 .............................. TAGATGCGGTGGCAAACCGCGAAAAAAATGGGGTTA 137694 30 100.0 34 .............................. CTGGCTTTTTTGAGGGACTAAGAAAAAATATAGC 137758 30 100.0 37 .............................. ACGGGTATAACAGCCTACCTAAACAAGGTGTAAAAAG 137825 30 100.0 37 .............................. AGTCGATTTTGTTTGGCTTAGCGTCGTAAAACTTGTC 137892 30 100.0 37 .............................. AAATACGCTAGCGTGATAAATGCAGAGGGTGGCGAAA 137959 30 100.0 38 .............................. TCGGGGTTGATGAATACGGCAACTTGATCAACCACTAC 138027 30 100.0 34 .............................. TAACGCATATTGAGTGCGGCGATGGGCAAAACGA 138091 30 100.0 38 .............................. AACGATAGTGAGGGCTTTATTTTAAGCGAAAAAACTGG 138159 30 100.0 38 .............................. ACTGACGGAAAAGAGAACAAGGACAACAGCACCGCCAA 138227 30 100.0 36 .............................. AGAAAAGAGTATTTAAATCAAGTTTTAGCCGATGGC 138293 30 100.0 36 .............................. TTGATAAAAAGAGTGCTGACTTTCAAAATCTAATGG 138359 30 100.0 35 .............................. ACGAGTGGATCACTTCAGCACAAAACCCAAGCGTT 138424 30 100.0 34 .............................. AAGGCGGTCTTGTAAGAAGTTCAGCTTCTGGCAA 138488 30 100.0 35 .............................. AGCCACGAAATAAAGACAGAGCAACAAGGATTTTA 138553 30 100.0 37 .............................. CAATAAACTACGCCAACTTTTCGTCCATATCTATCAG 138620 30 100.0 34 .............................. CTCTAAAATATAAGTTAGCTTTAGAGAAACTAGA 138684 30 100.0 37 .............................. TCTAGCTGTATATCTATATGTGCCCGCTTAGCCCATT 138751 30 100.0 33 .............................. AAACAAAAACAAGGTTATGAGCCAGTTATCTCA 138814 30 100.0 37 .............................. ATAGGGGTGACACCCTTGTCACTATGCAATGACACAT 138881 30 96.7 36 ..............T............... TTTTGTTGTATGCCTCTAGGCTGTTATTAGCTATCA 138947 30 100.0 36 .............................. CAAATCAAAGAAGGAGACAAAACGATGAATTACAAC 139013 30 100.0 38 .............................. TAAAGTCTAAAGCTGGCATATACTTCATAACGAAATTT 139081 30 100.0 37 .............................. GCTTTAAGCGTGTGGGATAAGCTCACAAGCGGAGATT 139148 30 100.0 35 .............................. TATCCTCTTTTAGCGCCAGCAGATTATAAAGATCG 139213 30 100.0 35 .............................. CCGCCATATTTAAAGGGCGGTTTTCGTTGGCTGTT 139278 30 100.0 37 .............................. GCTTATCGGTCTTTGCTACTTGTTCTTTGCTTAGACC 139345 30 100.0 37 .............................. TATCCCCAAAGGGCTTTAATAAGCCCCTCTTTATTTC 139412 30 100.0 36 .............................. TTAAGATACTTTTTCATAAAATTTAACCAATTTTAA 139478 30 100.0 40 .............................. GAGCTATATAAGAGCTAATAGAAGCTAGAGATTGGCTTTA 139548 30 100.0 40 .............................. CTGATGATGCCCTTAGGTTATATATTAGGACTGGTAACAA 139618 30 100.0 36 .............................. GGATTTGGCTTTGTTTCTACACCAGTCCCACCGCCA 139684 30 90.0 0 ..................T......T...T | ========== ====== ====== ====== ============================== ======================================== ================== 57 30 99.7 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CGAGCTTGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGACTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTTGCGTATTTAAACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACCTAAAGGCCTATAAATCAGCTTTTTGGTGCG # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //