Array 1 123767-125253 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAWQ01000003.1 Streptococcus gordonii strain SK120 Contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 123767 36 100.0 30 .................................... CCTTGATGCTACTCATACGAGCTTCAAAGT 123833 36 100.0 30 .................................... ACTTATCCACGGGTAGTCCGCATATTCCAC 123899 36 100.0 30 .................................... AGGACAATATGAAAAACAATACTCTTTTGA 123965 36 100.0 30 .................................... TCTTGTAGACGGTTTCAGATGTTACTGTTT 124031 36 100.0 30 .................................... ATCTATTGCGATTCCAGAGCAAGAACGGAG 124097 36 100.0 29 .................................... CACAAGCGATTATGTGAAGGGGCGCTATG 124162 36 100.0 30 .................................... TTGCGATATACTTTGGCCCAACCACCAAGC 124228 36 100.0 30 .................................... TTTCAAAACTGTGTCTTCTTCTGCTCCCTC 124294 36 100.0 30 .................................... GAATGATTGGATAATCTAAGCTCAAAGTCT 124360 36 100.0 30 .................................... CTTGACCAAGTAGAGAATATAACAGACCGT 124426 36 100.0 30 .................................... GATAGATTAAGTTAAGGTTTCCGTCATTAT 124492 36 100.0 30 .................................... TAGTCCTTCAACTCTTCGTCCAGGATCTTT 124558 36 100.0 30 .................................... CGGTCGTATGCTGTGTAAGGGTCGTCGCAT 124624 36 100.0 30 .................................... TTTTTCGATTTCATCAACTTCATCTTCTTT 124690 36 100.0 30 .................................... CTAGTACAAGGTTTAGTTTTTGAAGATTAA 124756 36 100.0 30 .................................... CAGCCCAAGTTTCTAATGATGAGTTTTACA 124822 36 100.0 30 .................................... CTGTTAACTCGTCTACATAATGTTTAACAA 124888 36 100.0 30 .................................... TTATGCCCGTGTACAGCGTGGGGATATTGT 124954 36 100.0 30 .................................... GATAACGCTAGTTACAATTTAATCGCTATG 125020 36 100.0 30 .................................... AATATACCTTTGAATCGATGGGATTTTTTA 125086 36 100.0 30 .................................... CCTTTAGCTTCTAAACTCAATTTTTCGTCC 125152 36 100.0 30 .................................... ATTAGAGTATGCAGTAGAACTAAGAGAGTG 125218 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTAATCAATGCTCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAGAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTGAGAGTCTTATTTGTTGAACCTCGAAAAGTCTATGATTTCCCGCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAAGAATTGGAACTTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : TAATATTAAGATTTAATTCAATTCAACCATACTAGCTAGAGGTTGGTGGAGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGCGTTCCTTGGTCTACAGTGGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATGAGTTTTACAATTAATCTATCCAAAAAACAACCACCTATTTAGGTGGTTGTTTCATTATCTATTATTGCTTACTAGAAGAACTTGAACTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTCTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //