Array 1 6846-6620 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJX01000021.1 Ruminococcus sp. AM26-12LB AM26-12LB.Scaf21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 6845 30 100.0 36 .............................. AAGGATGCACTACAAAGAAATTCTGGAATCGTACTA 6779 30 93.3 35 ............A.............T... GAAAGCATCAAGGTTGTGATAAATGGGCTGATCTA 6714 30 100.0 35 .............................. GAAAGCATCAAGGGTGTGATAAATGGGCTGATCTG 6649 30 93.3 0 ....T.....................T... | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 96.7 36 AGTCCGTCCTGTGCGTTGGAGAGAAACAAA # Left flank : GAGATTTAGGACATGGAGTTTTTGTTAGAGGGTGAGGGTTGTGGCTCTTTTGTTGGGGTTGTTGTTGGTTTGTTTGGTTGAGATGTACAATATGTACAATGTTTAGGGGCTTGGTTTTGTTTGTGAATGTGGTGTTTTTATAAATTGGGGGAGGGTGTTTTTGAAAAAATTGTGCAAATGCGCTAATTGTTTACGAGATGTTCATTGTTTGTTCATATTTGTCTGGTAGTATAGGGATAGTTCGAAAGAACGTTACGAAAGACGCTGTAATGGTGTGTATCTGTATCATTACACATACAATTTTTTTCATAATAATCGCCCCGGTAAGCCACTACCGGGGCACTCCTCGTTTTTGGGCCTTTTTTGGGCTCTTTTTTTTGTGGGTGGGGAGGGACGGACGGACTGCCGGAGGGGCGGCTGCATGGTCGTGCCTGGTGCGGTCGTTTCGCCGGGTCATACTAAGCGTCTGAGTCTTCTGCCGTGCAGGGCGCCCCTCCGGC # Right flank : GGGGTTAAGAAATTTCCAGTGCAAAAAATATAGCGCGGGTGGGGTGTGCATGCTATAATGATTAGGATTATAGTGCTGTCGTCTGGTTTGGGGCGGCGGTGGTTGGGTTTTTGTTTGAATGGGAGGTCTGGATATGGCGGAGTCTATGAAGGATTTTGAGAGGGAGCTGGAGGCTTCTTTTAAGAGGATCGATGAGGGGGATATTATCTCCGGGACTGTTGTGAGTGTGGATGAGTCGGGGGTTGTTCTTGACCTTAAGTTTTATGCTGAGGGTTTTATTCCGGTGGAGGAGTTTTCCCGGGTGCCGGGGTTTAATATTAAAGAGGCTGTTCAGCCGGGGGATGAGGTTCAGGCGATGGTTCTTCGCAGGGATGATGGTCAGGGGAATATTCTTCTTTCCAGAGCGGATGCTGCGGATGTGCTTGCCTGGGACAGGCTGAAGGAGCTTCAGGATTCGGGTGAGGTGCTGGATGTTGTTGTGAAGGGGATCGTTAACGGGG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCCGTCCTGTGCGTTGGAGAGAAACAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 93755-92282 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJX01000002.1 Ruminococcus sp. AM26-12LB AM26-12LB.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 93754 32 100.0 34 ................................ AGTGCTGTCCAGCCAAACTTACCAAGTCGTGCAA 93688 32 100.0 33 ................................ GCCCAGGAGCCGGATGTCCTGGCGAAGTCTCCG 93623 32 100.0 33 ................................ GCCCAGGAGCCGGATGTCCTGGCGAAGTCTCCG 93558 32 100.0 33 ................................ TACCTTCTTCAGTGGAGCAAATCCACCGCCTTC 93493 32 100.0 33 ................................ AACCTCATGCGTCTTGTGTTAGCTAAACACTGC 93428 32 100.0 35 ................................ CTGTTTCGTCTTGTGAAGTATTTTTCTTAACTGCC 93361 32 100.0 33 ................................ AAGATACAAGGCGGCTGCCTCCTCGTAAAAATC 93296 32 100.0 33 ................................ CTCAACAATGGTATAGGTTCCTACTGGAATATA 93231 32 100.0 33 ................................ GGATATGCTTTACCGCAACCAGCCAGCATAGAT 93166 32 100.0 34 ................................ CGGCAAGGGGAAAGGAAGATCAAATAAGGACCTC 93100 32 100.0 34 ................................ CTGCTGATTGGGATAACTTAGAGGTTTCTCCATG 93034 32 96.9 33 .............G.................. ATATCCGCCTTTTTCCTGGCCACTATCTTTACC 92969 32 100.0 34 ................................ AATTAAATTGAATTATAAAAGAAGGGAGCGTATA 92903 32 100.0 33 ................................ CGCTTACTCCACGAGTTACAGTATACTGCCACC 92838 32 100.0 34 ................................ TATCACAGGTCAGCAGAAAAGTTGTGGTACATGT 92772 32 96.9 34 .............................G.. CATAGTAAATGGTATTTGTAATAGGGCTAACACC 92706 32 100.0 33 ................................ GGAAAAGAAGCAATGTCTGGGATGCTTGCTATC 92641 32 100.0 34 ................................ CTGGATATGACCTTAATTTTTTTTCGCATTTCGT 92575 32 87.5 34 .........T...CA....T............ CCCGATCACATATGCGATCACTGTAGCTCCAGCC 92509 32 93.8 33 .........T...C.................. GCAAAGTAGTTAGCTGCATTCTGGTAATATGCC 92444 32 90.6 34 ............ACA................. GAGTGTAGAAGATAGTGATAGCCTGGTTGATGAT 92378 32 100.0 33 ................................ ATCAACGCAAAGAGATTCGTGGAGATTGAAAGG 92313 32 93.8 0 .............T.........A........ | ========== ====== ====== ====== ================================ =================================== ================== 23 32 98.2 34 GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Left flank : AGGAGATTTGGACAGTTATCCAGTGTTTTTGTGGAAATGAGGTGACAAAGTGTTGGTAGTGATTACTTATGATGTAAATACAGAGACAACTGCAGGAAGAACTCGTTTGCGTAAAGTGGCGAAGCAATGTACAAATTATGGAAGAAGGGTGCAAAATTCTGTATTTGAGTGTATTTTGGATAGCGCTCAAAGTGTTGCTTTGAAGGGGATATTGTCTGATATTATTGACAAAAATAAAGATAGCTTACGTTTTTATTACCTCGGAAATAATTATCAGACTAAAATAGAACATGTAGGTATAGAACGTGGAATTCCAGTAGATCAACCTTTAATTATGTAGGTGCGAATCAGAAGTACACATAAAATGCCGGCAGGATTCGCACTACAAAAATCAGAAAAGTAACATGAATAACACTAAAGAAAAGAGAGAAGGGATAATAAAAAGTAGAAAAATTATATTTATTGCATAAAAAAACAAAGAATATTTGTGAAAATTTGCC # Right flank : AACAAAGAGGAAATCAAACGGTGTGGTACATGGGACATTCCCTATGCGGGGACAAAAACCGGAAATCGCAATTAATACTTGCATTTAACAGACATTGGTGTTACAATGAACGAAACTAAGAACTTGTTGGCATAGGAGTGGGCGAGAGCCCGCTCCTATTTGCTGAGAAGGAATTTGTTCAGAAATAGGCAGAAATAGGAAAGGCAGGTGGGAAGCATGAGCAGACGGGAAGAATATGAACAGAAGACAGAGGCGATCCTTACACCAATCGTGGAGTCCAGGGGCTTTGAGCTGGTAGACGTGGAGTATGTCAAGGAAGCCGGAACCTGGTATCTCAGAGGCTATATCGACAAGCCGGGCGGAATCACAGTCAATGACTGCGAGGACGTAAGCCGTGCATTCAGCGATATACTGGATGAGCAGGATTTCATCGAGGACAGCTACATTATGGAGATCAGTTCTCCGGGACTTGACCGGCCTCTTAAAAAAGAAAAAGACTT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //