Array 1 5766-4485 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKYA01000018.1 Staphylococcus felis strain F21 k127_47, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5765 36 91.7 29 ...C.......G.......A................ ATAAGTATGTGACTAAGGAAAGAGGAATA 5700 36 97.2 29 A................................... TCTCGTGATGGTGAGGCCACTGTTTTGAG 5635 36 100.0 29 .................................... CCATCGTATTGAATACATTCGACTTCTAC 5570 36 100.0 30 .................................... AAAGAAAAACAAGATAAGAAGTTGGTTAAA 5504 36 100.0 29 .................................... TGATTTTGCGTTGATATCCCAAAGTGATG 5439 36 100.0 30 .................................... ATCACGCGGTACTGACAACAAATTGAAAGG 5373 36 100.0 29 .................................... ATTGAAGATTACAAAAAGAAATTAGGTGA 5308 36 100.0 29 .................................... TGATTTTTGGTTAGGTCAACTTATGACAA 5243 36 100.0 30 .................................... TTTTTGTTTTTCCTTCTAATGCACCGCCTT 5177 36 94.4 29 ..............G..........G.......... ATATGCAAATTGCATCTTAAAATGGGCGC 5112 36 97.2 30 ............C....................... ATTTTTATTCGATACTTATTCTCGAATTAC 5046 36 94.4 29 ........G................G.......... GAAATGGCGAAAAAAGATTTAACGGCAAT 4981 36 94.4 30 ..............G..........G.......... ATGAGCCAGTTTTGTTTGATGCGCCACTTA 4915 36 94.4 30 ............C............T.......... AATGCTAATGTTAAAGAAGCAGACCTTACT 4849 36 97.2 30 .........................G.......... ATCGCTGTAAGACTGGCATGATTGGTTGTA 4783 36 97.2 30 ........G........................... GTTAGAAAATGATTACATTTGTGTCTCGTG 4717 36 94.4 30 ............C............T.......... AACTCTGCAAATTATGAAATTGTCGAGTAT 4651 36 94.4 29 ............C......A................ ATAAGCATGTGACTAAGAAAAGAGGAATA 4586 36 94.4 30 A........................T.......... CACTGCTGGGCAGTGTACTTGGTATGCATT 4520 36 88.9 0 ..............T..........T......T.C. | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 96.5 30 GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC # Left flank : AAGTGAAATTAACAAAAGGAAATTATTTATCGATTTACTTAAAGACGATGATAAAGAAAATGTATTACTTATATTGTACCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTATACAATTGATTAAAAGTTATCAACTCACAACCATTATAATTACAAATCACCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATCAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATACTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATTAAAAACAACAAGCTTTATTCAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCAAAATGGTAAAAACTATAGTGTGTATTTTTGAATT # Right flank : ATTTTTTCTGAATTTTTAGATATAATGATGATACTAGAATGACCAATTGATAATCAATAATCGAGAAATCTTAACGATACATGTCTTTTCTTTTCATTGATATAATGAAATGATATAGTCAAATATTTTTTAGAGAAGATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGTGAAAAACCAATAGTGAATGCTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGGGCAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACACGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTATATGACGCA # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //