Array 1 5586-1627 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXR01000006.1 Saccharospirillum salsuginis strain KCTC 22169 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 5585 32 100.0 33 ................................ AACCAACTGAAGCCCGAAGCCCTGGGCGCCGCC 5520 32 100.0 36 ................................ CCCGCCAGGTCGAACCAGAAGTTCGACGTGCTGGAA 5452 32 100.0 34 ................................ ATTTTCCTGGACCTGCCCGTCCCGAAACTGATCC 5386 32 100.0 34 ................................ TGAAACCAGCCGCCTGACGAACCCTGTCAGTAAA 5320 32 100.0 33 ................................ ACTGCCATTGAGTTCCGCTGTCTCAGTGACGAA 5255 32 100.0 35 ................................ ACGACTACATGATGAACAACGGGGGTCGCCCATGA 5188 32 100.0 35 ................................ GAAGCGGCTCCGTCGACCTGGAGCAAGATCGCCAT 5121 32 100.0 33 ................................ AAAGTTTTGGAGCCTTCCTTATGAACACCCGCG 5056 32 100.0 35 ................................ GTGGACTACCACATCAACAACAGCGACCCGCGCTG 4989 32 100.0 32 ................................ TGTGGCACTATTTGGATTGTATACTTGGCTCG 4925 32 100.0 35 ................................ ATGGCGATTGGATCCCTGGCGGTTCGCGTATCGGC 4858 32 100.0 35 ................................ CAGAGCGGTCTGGCGATTGGCTTCCATTTAGCAAT 4791 32 100.0 34 ................................ CAAGCACTTATCGCCGGAAGACCGGCGCCGGGTG 4725 32 100.0 37 ................................ CCATGAAGACCTGCAAGCGGTCTATCGCCGACTGGAC 4656 32 100.0 33 ................................ AGTGGTCGACGCCAAGCCACCCAAGTCCGTGAA 4591 32 100.0 34 ................................ GGCATGCCGCTGCGGATTGGCCGTTATGACGATC 4525 32 100.0 35 ................................ CCGCTGGACGGCGTGGCTGATTACCAAGCGCCCCT 4458 32 100.0 35 ................................ ATGTTATCAGCGCCTTCGGATGCCTGGGTCAGCAT 4391 32 100.0 34 ................................ TCTTGCACGGTCATCGCGGCCAACAGCGGCCCAT 4325 32 100.0 34 ................................ ACCCCGTCCATGACGTTTTCCGACTGGGTGGCTG 4259 32 100.0 38 ................................ GACGGCGGTTTTTTGGGTCGGCTTGTCGACCGCCGCGA 4189 32 100.0 34 ................................ GGGTGGAACTCGATGCCCAGGTCAGGGACGGCAT 4123 32 100.0 34 ................................ ACATGCACAGCATTTATTCTATCGTGGCGTGATT 4057 32 100.0 34 ................................ ATTTTGGCCCGCGGAGTCCGCTTCCAGTAGACGG 3991 32 100.0 35 ................................ AGGGCCTACGACACGAAACAAGCCTTCTCAGACGC 3924 32 100.0 35 ................................ TTTGTTACCGGCGTACAAGCGGCACCAGTAGCAAC 3857 32 100.0 34 ................................ CGCAAACTGGAAGACGCGAAAAGGTACGTACTGG 3791 32 100.0 36 ................................ AGGTGGACCACTGTTAGGTGTAACACGTGTCCGTTT 3723 32 100.0 35 ................................ AGACCTAGTTTGACTAGGGTAAAGTCAGTCCCAAC 3656 32 96.9 34 ....................A........... ACATCAACGCCATCCATATCCGCCCGGTTGAGGA 3590 32 100.0 35 ................................ ATGAAAGAAAACAAAGACACCGAAGTGTCTAAGGT 3523 32 100.0 34 ................................ ATGGTATCCCCGTCAGACGCCGTAGAGAGAGCTG 3457 32 100.0 36 ................................ CATTGTACCCCACAGCATGTCGTAAACGTGCTTGAC 3389 32 100.0 33 ................................ GAGTGCGACAACGGTCAGACCTATCTGATCAGC 3324 32 100.0 33 ................................ TTGTCATGCCCGAAACGTGCGCCGCTTTTGCGC 3259 32 100.0 35 ................................ TGGAAAACGCCAACCTGGCGGATCCGGACCACCCG 3192 32 100.0 33 ................................ CGGCAGTGAGGGACGGTTAAACGGCATTTATAC 3127 32 100.0 33 ................................ TCGTGGAAGGCGGCTTCGTCGATGATGACCACC 3062 32 100.0 36 ................................ CTAGCCATGTTATTAATCACTTCACCGTTAACCGGC 2994 32 100.0 34 ................................ GTTCGAGGTCACCGTGGATCCGGTCCTTGTACGC 2928 32 100.0 34 ................................ GTACCGATCGATGTGGCGCTCCAGGAAAGCCTCC 2862 32 100.0 36 ................................ ATGCATCACGGCTGCCGGGTTCGCATTGGCGGGAAA 2794 32 100.0 34 ................................ ATCCCATGGATTACCGGGCAATTCGGGGAACTGC 2728 32 100.0 36 ................................ AGTACAACCAGCGCCGACAGAAACAGGGTTAAGGTG 2660 32 100.0 35 ................................ ACACACCGCGTAATACCCAAAAACCAATACTGCAG 2593 32 100.0 36 ................................ TCCTATCCCTGGTGGCGATGTTCTCGTTTGCCGCTG 2525 32 100.0 35 ................................ AACACGTCGGTGTGGGGTCAGCACCACTACAGCAT 2458 32 100.0 36 ................................ TGCAGTTCACCGACCTGGTGAACGGCCCTGACACAG 2390 32 100.0 33 ................................ TCCCTGATCAACCTGTGTGGCCTGGCCTGGCTC 2325 32 100.0 34 ................................ TTTACTAACATGAGATACTCCGAAGTGATCCAAT 2259 32 100.0 35 ................................ TCACCCAGCTCCAGGCTGATCGGAACCGTCATGGC 2192 32 100.0 34 ................................ TGTACCAGCATAAGATACTCCGAATTGATCCAGT 2126 32 100.0 35 ................................ ATCCTTGCCTATTGGACGCTGAAGTTATCGATGAA 2059 32 100.0 34 ................................ CTTTTGGGATCGCTCGATTCGCATTGGCTTCGTC 1993 32 96.9 34 ..................A............. AGCGTGGTACCGGCCTGGCCGCGACGGTTGAAGT 1927 32 100.0 37 ................................ GTGTCGTCCAGTAACGGGATGCCAGCCGCTTCCATGG 1858 32 100.0 35 ................................ TACGACAAATTGTATGTCGACCTGGAGCATTCCTC 1791 32 96.9 36 ...........T.................... TCCCAGGATAAGCCCTGGCTGATCGTCATAAACTGG 1723 32 93.8 34 ..........................T.G... ATCATATACTCATGTATTCGATCGCCTGTGCGTT 1657 31 71.9 0 ...-....A.T.A...C.AA.....AT..... | ========== ====== ====== ====== ================================ ====================================== ================== 60 32 99.3 35 GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC # Left flank : TTATACTCCTTACTTGGTGAGATGATATGCTGGTACTGGTTACCTATGATGTAAGCGTAACGACATCCGAGGGTAGGAGACGACTGAGAACCATTGCGAAAATTTGCCTGGATTATGGCATGCGAGTGCAGAACTCGGTCTTCGAGTGCGATGTCGACCCTGCGCAATTTGCCGTCTTGAAGGAAGAACTGATAAGCACTTACGATTCTAATGAGGACAGTCTTCGATTTTATTTTCTGGGTAAGAAAGGTCGACAGCGTGTCGAGCACTATGGTAGTAAGCCTGTTAGTGATCCAACTTCCGATCCGCTGATTGTCTGATGCGTGCGCTAACCAGGAGTTCTCATGAAAGTGCTGGTTTGTTAGCGCATATCTAACCAACTGATTTTACTACATTCTTCTCATTCACTCCTAATTACTCTTGGCCATTGCACTTGGATTTCCGTGGTTATCGCAAACAGACGTATTTTCCTTTGCTCTTTAACAACCTAGACTTGAGCG # Right flank : GATCATCCAGGTCAGTACCTCTAGATCGTAGTCATAGAGCTCCGGAGACGCATAGAATAAAACTGCTTTCCGGTTCGGGCGTAACTTCGCTGTGGTATTGACAATTCATGAAGGTTTTCAGTTACAGAGGAACACATCATAGCCTTTACTGCCACTCCTGAAGATCCGAAGTAAACAGTTTCACCAGAACGTCAGAGCTGATATTCTGCCTACCAATCACTCAAAGTAATTACCTTCCAAACCCCATATTACACTGTGTAATTCTTTATGTGATCAACCTCCCGTTTTTGATACAAACCAACCGATATTTCCTATTCAGAGATGAACACTTTAACTTTCTCTGGTATCTATCCCCTCGGCGAGCCAGGACGTACGCCATGGACACGGACACACACGACCAGGGATACCCATGAGCACCCAGAGGGACATCGCCCAACTCCCCGACGACGCCAAGAACTTTTTGCGCCGACACGGCATTTCACTGAACCCCTTGGTGTGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //