Array 1 156544-160432 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKH01000002.1 Clostridium perfringens strain An185 An185_contig_2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 156544 30 100.0 36 .............................. TAATCCATTTTTAAAGAAATTATTTAAATAAGTTTC 156610 30 100.0 36 .............................. TTAAATTGTTTTTCTATTGTTACCCTGTGTGCTCTA 156676 30 100.0 35 .............................. CTTTAAAAAAGTCCTTAAGTATCTTATTGATCTGT 156741 30 100.0 35 .............................. AGTTTAACATGGTGCTTTGTACAAGAAGATAGAAT 156806 30 100.0 36 .............................. GCTAACTTAACATATAATCCACTCATATCTCCATAA 156872 30 100.0 35 .............................. AGATTTCAGAATTCTATTCCAGATATAGAACTTCC 156937 30 100.0 35 .............................. AGGATTCTTTATACTGCTCAAAGGTATAGTAGAGT 157002 30 100.0 36 .............................. TATCTTCTCTTAATAATCTCTGATAATGTTTTCCAT 157068 30 100.0 36 .............................. ACAATGTACTAGATATTAAAAAGGAGTGAAAATTAA 157134 30 100.0 36 .............................. TCAATCATTTTGGTTACATCTTCCCTAAGTTTATCT 157200 30 100.0 35 .............................. CAAATAACATATGGTTATGGAGTTACTCAAGCAAA 157265 30 100.0 36 .............................. TTATTTTTATTATGTTAATATTAAATCAATAAAAAC 157331 30 100.0 35 .............................. AGGTATATGGAAAATATGGATAAACTAGAAGGCTT 157396 30 100.0 36 .............................. CTTTAAGAAATCTTCATAGCAATAGTTCATATCTAC 157462 30 100.0 39 .............................. ATGGTACAGTAATGGAAGCTAATAGAGTACACCACATTG 157531 30 100.0 35 .............................. AAATGGAGCTATATGGGTAGCTAATAAAGCTAAGA 157596 30 100.0 37 .............................. TATATAACGTTGGAGGGGATTTAGTTTTTCCAATTTA 157663 30 100.0 36 .............................. TTACGTAGAATTTGATAAATACAATATATTAAAAGA 157729 30 100.0 35 .............................. GTTCGTAAGCTTCTCCAGCTACATTAACGGCTACG 157794 30 100.0 35 .............................. CATCAATGAATTTTTACTTTCGTTTAATGTTTTCA 157859 30 100.0 35 .............................. CCGCTAGTATTATAATAATATCCTCTTTGAGCAAC 157924 30 100.0 35 .............................. CTATTTCTACAGGTTCACCCTTTATATATATAACC 157989 30 100.0 36 .............................. AAAAAGTTTGAAAGAATGTAATATTGGTTTAGATGC 158055 30 100.0 35 .............................. TATTATAACGCTTACCATTATGAATATATACCAAA 158120 30 100.0 36 .............................. AATCAAAGAGATACTAAGTAAATTAACAGTTGTCAT 158186 30 100.0 34 .............................. GTTATTAGCTATTTCATCAGAACTTATTCCAGTT 158250 30 100.0 36 .............................. CGATAAAGAACTTAATAAAACACATGTAACAGTTCA 158316 30 100.0 34 .............................. TAGCTGTTGTAACTAAAAATGATTCAACAAGCTA 158380 30 100.0 36 .............................. GCTAGGGGCTGTGGTAATTACAGTACATTTAGGAGG 158446 30 100.0 35 .............................. GTATTTTTATCAGGATATTTATTATTAATAGTTTT 158511 30 100.0 36 .............................. TCTTTTGCCCTATAGATAACCCATTAAAAAATTTAG 158577 30 100.0 34 .............................. GAGGGTTAACTAAAGAGCAGAGTTTACCTACTGG 158641 30 100.0 34 .............................. CTAATACTCAAGCAAAGTTGTTTGGAAGTAGTAC 158705 30 100.0 36 .............................. ATAAGTAGAATAATCAAAAATATTTCCTAGTTCACC 158771 30 100.0 35 .............................. GATTGGCTGGAGAGCTAAGAATACTAATGGGAAAT 158836 30 100.0 36 .............................. TTTATAATATAATAATGTTAAAATAAATTTTAGGAG 158902 30 100.0 34 .............................. GTTCTAAATCACTATCTGTTAATGATAGTGTAGT 158966 30 100.0 35 .............................. GTTTTCTCAAAAGCTTATTGACTTTACCGAAACTA 159031 30 100.0 36 .............................. GAAATAAATGGCACTAAATGATAAAACAATAAACTT 159097 30 100.0 35 .............................. CCTATCCAAACTCTGCATTTTTCTGCATTAGAATC 159162 30 100.0 34 .............................. TTCTTGTAAGAATCCATTAATAGCTTGTATTTTC 159226 30 100.0 35 .............................. TCTCTCCAAAAGTGATTTCCATTTTCGTCAAAGAC 159291 30 100.0 36 .............................. AATGGAAACTAGAGGGGGAAATGATGGTCCAAGAGG 159357 30 100.0 35 .............................. GTTTTCTCAAAAGCTTATTGACTTTACCGAAACTA 159422 30 100.0 34 .............................. CTATTATTAGCACCTATAACACCAGTTCCTGCAT 159486 30 100.0 35 .............................. TTCTTATTCTGTAAAAATTTTTAGAAGAACTATAT 159551 30 100.0 35 .............................. AGCTACTGCAAAGGGTTTATTAGAATTCACTAAGA 159616 30 100.0 36 .............................. CTCATGGTCTAGCTCACATTCTCCACAAGAATAAAA 159682 30 100.0 35 .............................. TAAGTTTTTTAGATTGTATAGCAACTTTAAATAAT 159747 30 100.0 36 .............................. TTATTTAAGTCAATTTCAAAAGAAGCATCCATATTT 159813 30 100.0 35 .............................. GGTCATAAAGTTTACAATATGGCAAGTTGTATTTA 159878 30 100.0 36 .............................. AAACCCTCTATATCATTATTTACTATAGCGTAATCT 159944 30 100.0 35 .............................. TTTCTAAAGCTATTATCTGCATCTCCATTAATTGC 160009 30 100.0 36 .............................. TATGAAATAGCATAATATAGAAAGGAGAGTGAACTA 160075 30 100.0 36 .............................. TACCATCTACGCTCATAATAGTAAGCTGCTTGTAAG 160141 30 100.0 36 .............................. TGTTGGCAGAATATTAATTACTTCATCGTAAGTTTC 160207 30 100.0 36 .............................. TTTATCTCCAATGGTAACAAATCCATCAAAATCAAC 160273 30 100.0 35 .............................. TTTTAGTTAATCCAACGATTAATTCTGCAAGCTCC 160338 30 100.0 35 .............................. ATTGTTACTGATTCAAGTACTTTATTTTTAACAAG 160403 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 60 30 100.0 35 ATTTAAATACATATCATGTTAAGGTTCAAT # Left flank : ATTGGATTCCAATAGAAGAACTAAGTAATTATCGCGCTTATCCTACATTCTTTAGAGAAAAGTTAACTAATCTTAAGAATGAGATTGAACACATAGTAACTTATGAATATTAGGATAAAAAATAAAACTGATAAAATACTATTTTTATATTTTATCAGTTTATTTTTATATTATAAACTTTTGATTTTAAGATTATATTTTTTAAATTATATTGGTTTACTTTTGATATAATATTCCAATTTTCTCCATACATCCATACTAAAAGACAAAAACTTAAAAATAAAGCCATTCCAAGATTCATAAGCCTTATAAAAATATTAGATTTTTCTATATCTTGCCACCACCAGAATTTCAAAATATTTTTTATAATAAAAGATAGTTTTTTCATATTATACCCCTACTTAATTATAAAACTTTATATAGAAAGACATTAAGTAATTATATTATACTGAAAAACAATATAAATTAGTTACTTAATTTTTAGTGAATTCAGTATTAAT # Right flank : TACTTGTAAAATAGCCATTTTTAAATTTAATAAATATATCTTAATCTAGTTATTTCAATACTTATACTATAATTTTACCAGTGTTTTATTAAGAGTTAAAGAGGATATCGAAAATCAGTCTAAAACTTAGTTGTTTCAAGGGTTTCGCAAACTTTTTCCCACTTAAATCACTGGTAAAATTATATGTTATTTTGAATTAATTATTAAAGTATCAGTGTTTCCCCATTAATTACTTCTTGAATTCCTAGCACTTCTTCTCCAAATACATTTCCGTTTAATAATTTAACAATACATATGAAGTCTTCATCTTTTTCTATTACTTTATTTAAATCCTTTCTTAAGTTTATAAGATTAGCAGGGGTTATTTCTCCCCTAAAAACTGATTTTTGAAAATGAGATAAATACTTCTTACAAACTTTAAACACCCTATTTACCCTCTTTTCATTTACATCATAAAATACAAAAGCATAATTATAATTCATTTTACTTTTCATATCTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATATCATGTTAAGGTTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [85.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 173216-170763 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKH01000002.1 Clostridium perfringens strain An185 An185_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 173215 30 100.0 35 .............................. GTTCTTGGCTAGAATCTTCTGCATAAACTTCTTTT 173150 30 100.0 35 .............................. GTATATAGGAGATTTGGATGAAAAGGCAAAGAAAA 173085 30 100.0 35 .............................. TTGGAAAAAAGATGAACAATATATAGGTGGACTTA 173020 30 100.0 36 .............................. TTTTAATAAAAATATACATACCCTTCAAAATGGCAT 172954 30 100.0 35 .............................. TGTTGTCCTTTGTAATACGCTATACCTTCCTTAGC 172889 30 100.0 36 .............................. AGCTTTAGCTTATACAGGAAGTTCTATAAATGCTGA 172823 30 100.0 36 .............................. GACTTAACAAGTAAAATAATAAAAAATAAAGAAAAT 172757 30 100.0 35 .............................. TTTAAGAATGTTAATAATATAAGTGGTGTTTTTAT 172692 30 100.0 36 .............................. TTTTATGAGCTGGAGTATCTATTTTAACAAATATAA 172626 30 100.0 36 .............................. GTGTTTGAAAAAATCAAAAAGGTTAAAACAAGGTGT 172560 30 100.0 36 .............................. TATTCCGTTCTTTTTTAAATTTATAATCTAATTATA 172494 30 100.0 35 .............................. ATATAACTTAAGTATTAATAAACAAATTGGTAAAG 172429 30 100.0 35 .............................. ATTAAAGGTTTAAACTTTAACCTAAATTTTGAAGG 172364 30 100.0 35 .............................. AATTTAAGTATGTACTATAAAAAATATTTTAATGA 172299 30 100.0 36 .............................. TAATTTAGGAGGGATTAATTCCCTTCTTTTTATTAA 172233 30 100.0 36 .............................. AAATATGGATGCTTCTTTTGAAATTGACTTAAATAA 172167 30 100.0 35 .............................. ATAAAAACGGAATAAAAAGACAAAACCCGCAAGAT 172102 30 100.0 36 .............................. TCTATTTTATTTATTAGATCTATAGCCTTTGGATAA 172036 30 100.0 36 .............................. AGGTGGGATAAGCATGAATTAAAATGTGCCTGCTTA 171970 30 100.0 35 .............................. CCCAACAATTATAAAAATCTACTTCTACACCTTTT 171905 30 100.0 34 .............................. TAACTTTATATCCTCCTTGATTTCCCACCAAAGA 171841 30 100.0 37 .............................. TTTAGTGCCATTTAAGTTCTCCTTTCTAAATAAAAAA 171774 30 100.0 34 .............................. ATGTATGCACAAGCTCCTACTGCATGTTGAGTAG 171710 30 100.0 35 .............................. TATGGAATGAAAGCTGATGAAGTTACTAAAGTAAG 171645 30 100.0 35 .............................. TAATCATCTTTAAAAATTTTAATCATAAATTATCC 171580 30 100.0 36 .............................. AGGGAATGGATATAAGGAGCAAGATTTAACAAGACA 171514 30 100.0 35 .............................. TTAATGCTCAGGACTATAATATGTCTATGGCGAAC 171449 30 100.0 35 .............................. TAAGTTTCATATTCTTTCCCATTAACTTGTATTTT 171384 30 100.0 34 .............................. TCTTCTATAATTCTAGTTTTTGTATGTTTAACTA 171320 30 100.0 36 .............................. ATGATAGAGCGTGGGAAAAGGGTTCCAACATTAAGA 171254 30 100.0 36 .............................. AATAACATACCTAGTGTATGTTGTGGTTGTGCTACA 171188 30 100.0 36 .............................. TATTTCCCTCCCATTTCTTAGCAACTTCGCTAAATA 171122 30 100.0 36 .............................. TTTGGATAGAATCTGAGAATTGCAACATTAAAGAAG 171056 30 100.0 35 .............................. TCAAATACTTTTATTCCTTCTTTTATTGGTTTTTC 170991 30 100.0 35 .............................. AAAACATAACAGTTCCTACAATTCTTACATTGAAC 170926 30 100.0 36 .............................. TACTTACGGAACAACTCAGTAATACGCTTATGAATA 170860 30 100.0 36 .............................. GTATTTGGGGCAACTCGATAAGATCCTTGAAGCTTT 170794 30 100.0 0 .............................. | TT [170767] ========== ====== ====== ====== ============================== ===================================== ================== 38 30 100.0 35 ATTGAACTTTAACATGATATGTATTTAAAT # Left flank : TAAACTTTTTCATAACAATATACCTCCTTTAAAATAAAAAAGCCAGAGAAATATTATAAAAATATCTCCCAGGCTTTTATCCTTCCGTGTTCACAGTCTTTCTGTGCGTTTTCTCTTGGACCAGACTAACTAAAAAGCTACGGAACCCTAGAAAACCATATATTATTAAACTTTAATTAACAAATTCAAAATTATAAGTTAATTTTAGCATAGTATAAATGCTAAATCAATTCACTGATAAAAATTTGAAGCTTACTGAATAGGTGAATTTTAGTATTTAATTAATGCATTCTTAGAAACATTTATAAATACACAAATAAAATTTTACCAGCCTAAAATTATATGAAATTACCCTTTAGACCTTGAAATAACTAGATTATAAGTTGATTTTATATTAGTGCTTTAAATTAAAGTGAAACACTGGTAAAATAATAAGAGAGGTGTTGAAATAACTAACTTAAAGATAAATATCAAGAAAAAGAAATGGCTATTTTACAAGC # Right flank : AAGAACTTTAAATATTAAATTGTTGAAATAGGAATATTGCGATTACTTTTTCTAAGCTGATTAAAATACTTTTATTATTAACTAACATTTTATTAAATAATTAATATTACAAAAATGTATAAATTTATAAAATAATTATTTGTTTTACAAAATTTGTTGGGTAAAAATTATAATTATAACTATAATATGTAATATTTTTGTAAGATGAAAAGAAAAAATGCTTTAAAATATTAAAATGATTAAAAGATAAATTTTGTAAAAATAGTTTTTATTGGTATAATTAAAACATCAAATGTATTTAATTTATATAATAAAGTTTTTAATAACTCGTAGAGTATTTAAAGAATGTCTTTAATGCATAAAATATTTTAACCATAACATTAGATGTACTAAACAAAAGATAAACTAAATTATTTGATTTTTCAATTAATTATTTAAAATCAATTTTAATAAAAATACATTAGATTTATATAAGGAGGTGAGTAAGGTGAAAGTTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACTTTAACATGATATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //