Array 1 149594-147712 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPFV01000012.1 Streptococcus mitis strain SK667 gsmSK667.contig.11_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 149593 36 100.0 29 .................................... TGATGGAGCTGAGGTAGATTATGAGGGTG 149528 36 100.0 30 .................................... ATAAGTCTTATCTGATACCCTAGGAAGAGC 149462 36 100.0 30 .................................... CAGAGCCTGGATTGTTGATATTGCCACTTG 149396 36 100.0 31 .................................... CTTTCTACTTTCTCCAACAATTCTTTTACTG 149329 36 100.0 30 .................................... ATCAGATTTCAAATTTAAAGACTCAGGTCT 149263 36 100.0 31 .................................... CTTTCTACTTTCTCCAACAATTCTTTTACTG 149196 36 100.0 30 .................................... GTGACGCAAAATTGAGTAAAAAGATAGATT 149130 36 100.0 30 .................................... AGGTCATATTTATCTTGGCGATGAGTTCGT 149064 36 100.0 30 .................................... TCATTTTTTAATACTAATGGTGCCGCTACC 148998 36 100.0 30 .................................... TATAATTTTTATTTTTTATTTTTGTTGTAT 148932 36 100.0 30 .................................... GTCTGTGGTATATAGTTTTCTGAGTTCTTA 148866 36 100.0 29 .................................... CTGATCCAAGCGGAAGCGTCAAGGAGTAG 148801 36 100.0 30 .................................... CAGCTTCTTTCATTTTCGCATCACTAACAA 148735 36 100.0 30 .................................... AATCACGGGAAACACAGGGGATAAGCAACT 148669 36 100.0 30 .................................... CTATCTACTATACAAGACGAGTTACAGAAA 148603 36 100.0 30 .................................... ATTCTAATTCTGCCACTACTGACCAAAACA 148537 36 100.0 30 .................................... ACTTCTTTTTGTGAAGAGTCAACAATGGTA 148471 36 100.0 30 .................................... GACGATAAACGCACCGTGAATGATATTATA 148405 36 100.0 30 .................................... GCACAAACATCATCCACGGCGATAATCACG 148339 36 100.0 30 .................................... ATTGTGGCGCTCCTTTAAAAATTATGTTAG 148273 36 100.0 30 .................................... TTGACCCCTGCAAGCTGGATAAAACGCCCG 148207 36 100.0 30 .................................... TGGCTTACTGCTTTATCTAAACCACCGAGA 148141 36 100.0 29 .................................... ATTGAACTCTATTTCATTTACAACGGGCA 148076 36 100.0 30 .................................... CAAGGCTGCCATCTGTCTTTCTTGCACCCC 148010 36 100.0 30 .................................... CGAGTGTGCCTGATTCTGTTTTGGAAATCT 147944 36 100.0 29 .................................... ATATCCCAACCGTGTGGTATAGTGTTGAG 147879 36 100.0 30 .................................... CTTAGCGACAAAATCAACGTGCCGAGAACC 147813 36 100.0 30 .................................... ATACAAGCCTGGTGGAACGTGTGCTGGTAG 147747 36 94.4 0 ..................................TT | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATGATTTTTTATCCTATAATGATTTTGTTGAATGTTGCGAGAAAATGGAATTTCTTACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTATTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATGCCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTCCACATGAGTTTATCTGTAGAAGATCAAGTCGTATTAAAAATTTTGAATAATTTGTATCAGTACAAAATGAAAACAAAATTCCGTATTGAATCAATCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : TAGATAATATTAGCGATTCTCTAACTTATAAAAACCCGCTCAGCCGAGCGGGTTTCGTCTATTCTTTCCTTTTACAGTACCCATGTACGGATGGCATGGGCAACGCCAGATTCGTCATTTGTTTTAGTGATGTATTTGGCTATTTTTTTGATTTCTGGATTTCCGTTTTCCATGACAACTGGGTTACCAACGACTTCCAGCATGGCGCGGTCATTTTCTTCGTCACCAATCGCCATGGTTTCATCTTTGGTCAATCCTAGTTTTTCAGCTAAGTGAGTAATAGCTGAACCCTTGTCTACATTCTTTTTAAGGAGTTCGAGGTAGAAAGGAGCAGACTTGTTGATAGAGTAGCGGTCGTAAAATTCTGCTGGGATTTTTTCAATTGCAGCATCGAGTATTTCTGGTTCATCGATGAACATACACTTGACAATTTCCTTGCCAGCCATTTCTTCAGGAGTGCGGTAGAAGATAGGCATGCTGACGAGGGTTGATTCGTGCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //